CN181551

Overview
NameCN181551
Unique NameCN181551
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length619
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig121 contig Csv1_Contig121:10..628. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN181551 vs. ExPASy Swiss-Prot
Match: FRI3_SOYBN (Ferritin-3, chloroplastic OS=Glycine max PE=2 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 5.040e-43
Identity = 89/143 (62.24%), Postives = 99/143 (69.23%), Query Frame = 2
Query:  191 RSLKVSAAVDANSMPLTGVVFQPFEEVKKEXXXXXXXXXXXXARQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXXMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELAL 619
            ++L   A  D N+ PLTGVVF+PFEEVKKE            ARQKY D+CEA INEQINVEYNVSYVYHA++AYFDRDN+AL+GL                  MEYQN RGGKVKL SI+ P SEFDH EKGDALYAMELAL
Sbjct:   39 KNLVPCATKDTNNRPLTGVVFEPFEEVKKELDLVPTVPQASLARQKYTDDCEATINEQINVEYNVSYVYHAMFAYFDRDNVALKGLAKFFKESSEEEREHAEKLMEYQNKRGGKVKLQSIVMPLSEFDHEEKGDALYAMELAL 181          
BLAST of CN181551 vs. ExPASy Swiss-Prot
Match: FRI2_TOBAC (Ferritin-2, chloroplastic OS=Nicotiana tabacum GN=FER2 PE=2 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 6.583e-43
Identity = 88/141 (62.41%), Postives = 99/141 (70.21%), Query Frame = 2
Query:  197 LKVSAAVDANSMPLTGVVFQPFEEVKKEXXXXXXXXXXXXARQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXXMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELAL 619
            L V A+  +N+ PLTGVVF+PFEEVKKE            AR KY D+CEAA+NEQINVEYNVSYVYH +YAYFDRDN+AL+GL                  MEYQN RGGKVKL SI+ P SEFDHAE+GDALYAMELAL
Sbjct:   44 LVVCASKGSNTKPLTGVVFEPFEEVKKELMLVPTVPQVSLARHKYSDQCEAAVNEQINVEYNVSYVYHGMYAYFDRDNVALKGLARFFKESSEEERGHAEKLMEYQNKRGGKVKLQSILMPLSEFDHAEEGDALYAMELAL 184          
BLAST of CN181551 vs. ExPASy Swiss-Prot
Match: FRI1_TOBAC (Ferritin-1, chloroplastic OS=Nicotiana tabacum GN=FER1 PE=2 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 5.573e-42
Identity = 87/148 (58.78%), Postives = 99/148 (66.89%), Query Frame = 2
Query:  176 SPRTKRSLKVSAAVDANSMPLTGVVFQPFEEVKKEXXXXXXXXXXXXARQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXXMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELAL 619
            SP+      VSA+   N  PLTGVVF+PFEE+KKE             RQKY D+CEAAINEQINVEYN SYVYHA++AYFDRDN+AL+GL                  ME+QN RGG+VKL SI  PP+EFDH EKGDALYAMELAL
Sbjct:   30 SPKNGNRFVVSASKATNHKPLTGVVFEPFEELKKELMLVPAVPDTSLCRQKYSDDCEAAINEQINVEYNNSYVYHAMFAYFDRDNVALKGLAKFFKESSLEEREHAEKLMEFQNKRGGRVKLLSICAPPTEFDHCEKGDALYAMELAL 177          
BLAST of CN181551 vs. ExPASy Swiss-Prot
Match: FRI1_BRANA (Ferritin-1, chloroplastic OS=Brassica napus GN=LSC30 PE=2 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 1.241e-41
Identity = 85/138 (61.59%), Postives = 97/138 (70.29%), Query Frame = 2
Query:  206 SAAVDANSMPLTGVVFQPFEEVKKEXXXXXXXXXXXXARQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXXMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELAL 619
            S+ VD N+MP+TGVVFQPFEEVKK             ARQ+Y D  EAAINEQINVEYNVSYVYH++YAYFDRDN+AL+GL                  MEYQN RGG+V LH I+ P S+F+HAEKGDALYAMELAL
Sbjct:   48 SSTVDTNNMPMTGVVFQPFEEVKKADLAIPITSNASLARQRYADSSEAAINEQINVEYNVSYVYHSMYAYFDRDNVALKGLAKFFKESSDEEREHAEKFMEYQNQRGGRVTLHPIVSPISDFEHAEKGDALYAMELAL 185          
BLAST of CN181551 vs. ExPASy Swiss-Prot
Match: FRI1_ARATH (Ferritin-1, chloroplastic OS=Arabidopsis thaliana GN=FER1 PE=1 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 1.621e-41
Identity = 87/144 (60.42%), Postives = 102/144 (70.83%), Query Frame = 2
Query:  191 RSLKVSAA-VDANSMPLTGVVFQPFEEVKKEXXXXXXXXXXXXARQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXXMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELAL 619
            R++ V+AA VD N+MP+TGVVFQPFEEVKK             ARQ++ D  EA INEQINVEYNVSYVYH++YAYFDRDN+A++GL                  MEYQN RGG+VKLH I+ P SEF+HAEKGDALYAMELAL
Sbjct:   43 RAVVVAAATVDTNNMPMTGVVFQPFEEVKKADLAIPITSHASLARQRFADASEAVINEQINVEYNVSYVYHSMYAYFDRDNVAMKGLAKFFKESSEEERGHAEKFMEYQNQRGGRVKLHPIVSPISEFEHAEKGDALYAMELAL 186          
BLAST of CN181551 vs. ExPASy Swiss-Prot
Match: FRI2_VIGUN (Ferritin-2, chloroplastic OS=Vigna unguiculata GN=PFE2 PE=2 SV=2)

HSP 1 Score: 165.236 bits (417), Expect = 2.341e-40
Identity = 86/138 (62.32%), Postives = 95/138 (68.84%), Query Frame = 2
Query:  206 SAAVDANSMPLTGVVFQPFEEVKKEXXXXXXXXXXXXARQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXXMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELAL 619
            +A    N   LTGV+F+PFEEVKKE            ARQKY DE EAA+NEQINVEYNVSYVYHAL+AYFDRDN+ALRGL                  MEYQN RGGKVKL SI+ P SEFDHA+KGDAL+AMELAL
Sbjct:   38 AAKGSTNHRALTGVIFEPFEEVKKELDLVPTVPQASLARQKYVDESEAAVNEQINVEYNVSYVYHALFAYFDRDNVALRGLAKFFKESSEEEREHAEKLMEYQNRRGGKVKLQSIVMPLSEFDHADKGDALHAMELAL 175          
BLAST of CN181551 vs. ExPASy Swiss-Prot
Match: FRI4_SOYBN (Ferritin-4, chloroplastic OS=Glycine max PE=1 SV=2)

HSP 1 Score: 164.466 bits (415), Expect = 3.994e-40
Identity = 92/162 (56.79%), Postives = 106/162 (65.43%), Query Frame = 2
Query:  143 STASLVKLGCISPRT--KRSLKVSAAVDA-NSMPLTGVVFQPFEEVKKEXXXXXXXXXXXXARQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXXMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELAL 619
            S+ SL       PR+   R L V AA  + N   LTGV+F+PFEEVKKE            ARQKY DE E+A+NEQINVEYNVSYVYHA++AYFDRDN+ALRGL                  MEYQN RGGKVKL SI+ P S+FDHA+KGDAL+AMELAL
Sbjct:   11 SSLSLFSPNAEPPRSVPARGLVVRAAKGSTNHRALTGVIFEPFEEVKKELDLVPTVPQASLARQKYVDESESAVNEQINVEYNVSYVYHAMFAYFDRDNVALRGLAKFFKESSEEEREHAEKLMEYQNKRGGKVKLQSIVMPLSDFDHADKGDALHAMELAL 172          
BLAST of CN181551 vs. ExPASy Swiss-Prot
Match: FRI3_VIGUN (Ferritin-3, chloroplastic OS=Vigna unguiculata PE=2 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 5.216e-40
Identity = 86/165 (52.12%), Postives = 106/165 (64.24%), Query Frame = 2
Query:  125 SSCYTKSTASLVKLGCISPRTKRSLKVSAAVDANSMPLTGVVFQPFEEVKKEXXXXXXXXXXXXARQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXXMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELAL 619
            S C + S ++ V  G       R+++V AA      PLTGV+F+PF+E+KK+            +RQ Y DE EAAINEQINVEYNVSYVYH+L+AYFDRDNIAL+GL                  ++YQN+RGG+V LH I  PPSEF+H EKGDALYAMELAL
Sbjct:   27 SLCSSSSLSASVNGG-----GSRNMRVCAAASNAPAPLTGVIFEPFQELKKDYLAVPIAPNVSLSRQNYSDEAEAAINEQINVEYNVSYVYHSLFAYFDRDNIALKGLAKFFKESSEEEREHAEKLIKYQNIRGGRVVLHPITSPPSEFEHPEKGDALYAMELAL 186          
BLAST of CN181551 vs. ExPASy Swiss-Prot
Match: FRI4_ARATH (Ferritin-4, chloroplastic OS=Arabidopsis thaliana GN=FER4 PE=2 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 1.518e-39
Identity = 83/137 (60.58%), Postives = 95/137 (69.34%), Query Frame = 2
Query:  209 AAVDANSMPLTGVVFQPFEEVKKEXXXXXXXXXXXXARQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXXMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELAL 619
            A+  + +  L+GVVF+PF+EVKKE            ARQKY DECEAAINEQINVEYNVSYVYHA+YAYFDRDNIAL+GL                  MEYQN RGG+VKL SI+ P SEF+H +KGDALY MELAL
Sbjct:   53 ASKSSTTDALSGVVFEPFKEVKKELDLVPTSSHLSLARQKYSDECEAAINEQINVEYNVSYVYHAMYAYFDRDNIALKGLAKFFKESSLEEREHAEKLMEYQNKRGGRVKLQSIVMPLSEFEHVDKGDALYGMELAL 189          
BLAST of CN181551 vs. ExPASy Swiss-Prot
Match: FRI_PHAVU (Ferritin, chloroplastic OS=Phaseolus vulgaris GN=PFE PE=2 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 2.589e-39
Identity = 80/135 (59.26%), Postives = 93/135 (68.89%), Query Frame = 2
Query:  215 VDANSMPLTGVVFQPFEEVKKEXXXXXXXXXXXXARQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXXMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELAL 619
            V A+++PLTGV+F+PFEEVKKE            ARQ Y DECE+AINEQINVEYN SYVYH+L+AYFDRDN+AL+G                   M+YQN RGG+V LH I   PSEF+H EKGDALYAMELAL
Sbjct:   46 VSASTVPLTGVIFEPFEEVKKEELAVPTAGQVSLARQYYADECESAINEQINVEYNASYVYHSLFAYFDRDNVALKGFARFFKESSEEEREHAEKLMKYQNTRGGRVVLHPIKNVPSEFEHVEKGDALYAMELAL 180          
The following BLAST results are available for this feature:
BLAST of CN181551 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 30
Match NameE-valueIdentityDescription
FRI3_SOYBN5.040e-4362.24Ferritin-3, chloroplastic OS=Glycine max PE=2 SV=1[more]
FRI2_TOBAC6.583e-4362.41Ferritin-2, chloroplastic OS=Nicotiana tabacum GN=... [more]
FRI1_TOBAC5.573e-4258.78Ferritin-1, chloroplastic OS=Nicotiana tabacum GN=... [more]
FRI1_BRANA1.241e-4161.59Ferritin-1, chloroplastic OS=Brassica napus GN=LSC... [more]
FRI1_ARATH1.621e-4160.42Ferritin-1, chloroplastic OS=Arabidopsis thaliana ... [more]
FRI2_VIGUN2.341e-4062.32Ferritin-2, chloroplastic OS=Vigna unguiculata GN=... [more]
FRI4_SOYBN3.994e-4056.79Ferritin-4, chloroplastic OS=Glycine max PE=1 SV=2[more]
FRI3_VIGUN5.216e-4052.12Ferritin-3, chloroplastic OS=Vigna unguiculata PE=... [more]
FRI4_ARATH1.518e-3960.58Ferritin-4, chloroplastic OS=Arabidopsis thaliana ... [more]
FRI_PHAVU2.589e-3959.26Ferritin, chloroplastic OS=Phaseolus vulgaris GN=P... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001B20_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001B20, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN181551 ID=CN181551; Name=CN181551; organism=Citrus sinensis; type=EST; length=619bp
GAGGATCAAATTCATTTGCTTTCTTCCTTCAATCTCCATTACGCACTTGC
TTACATCAATGGCATTGGCAGCTTCTTCTTCCTCCTCTCTTGCAGCGAAG
CAACTGGCTGGTCTTATAACAAGCTCATCATGTTACACTAAGTCTACTGC
TTCTCTTGTGAAATTGGGTTGTATTTCGCCGAGAACGAAGAGGAGTCTGA
AGGTTTCTGCTGCTGTGGACGCCAATAGCATGCCGCTGACCGGGGTCGTG
TTTCAGCCATTCGAAGAGGTCAAGAAAGAGGTTCTTGATGTTCCTGTTTC
CCCTCTGCTTTCACTAGCTCGCCAAAAGTATGAGGACGAGTGTGAGGCCG
CTATCAACGAGCAGATCAATGTGGAATATAATGTCTCATACGTGTACCAT
GCCCTGTATGCGTACTTTGATCGGGATAATATTGCTCTGAGAGGCCTTGC
CAAATTTTTCAAGGAGTCCAGTGAAGAAGAAAGGGAACATGCTGAGAAGT
TTATGGAGTATCAGAACTTGCGCGGTGGAAAAGTAAAACTGCACTCCATA
ATGCAGCCCCCTTCGGAGTTTGATCATGCGGAGAAAGGGGATGCCTTGTA
TGCAATGGAACTAGCATTG
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