CN181548

Overview
NameCN181548
Unique NameCN181548
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length701
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13395 contig Csv1_Contig13395:453..1153. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN181548 vs. ExPASy Swiss-Prot
Match: LGUL_ORYSJ (Lactoylglutathione lyase OS=Oryza sativa subsp. japonica GN=GLX-I PE=1 SV=2)

HSP 1 Score: 267.314 bits (682), Expect = 5.561e-71
Identity = 128/151 (84.77%), Postives = 139/151 (92.05%), Query Frame = -3
Query:  247 GYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDFLKEIQ 699
            GY+FELIQRGPTPEPLCQVMLRVGDL RSIKFYEKALGMKLLR  D P+YKYT+AMLGYA+ED+TTV+ELTYNYGVTEYTKGNAYAQVAI T+DVYKSAE V LVT+ELGGKI RQPG +PGLNTKI SF+DPDGWK VLVDN DFLKE+Q
Sbjct:  141 GYMFELIQRGPTPEPLCQVMLRVGDLDRSIKFYEKALGMKLLRKKDVPDYKYTIAMLGYADEDKTTVIELTYNYGVTEYTKGNAYAQVAIGTEDVYKSAEAVELVTKELGGKILRQPGPLPGLNTKIASFLDPDGWKVVLVDNADFLKELQ 291          

HSP 2 Score: 110.153 bits (274), Expect = 1.136e-23
Identity = 61/126 (48.41%), Postives = 75/126 (59.52%), Query Frame = -3
Query:  277 LCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLV 654
            L   + RVGDL R+IK Y +  GMKLLR  D PE KYT A LG+  ED    LELTYNYGV +Y  G  +   AI+T+DVYK AE +         KITR+PG + G +T I    DPDG+   L+
Sbjct:   25 LLHAVYRVGDLDRTIKCYTECFGMKLLRKRDVPEEKYTNAFLGFGPEDTNFALELTYNYGVDKYDIGAGFGHFAIATEDVYKLAEKIK---SSCCCKITREPGPVKGGSTVIAFAQDPDGYMFELI 147          
BLAST of CN181548 vs. ExPASy Swiss-Prot
Match: LGUL_BRAOG (Putative lactoylglutathione lyase OS=Brassica oleracea var. gemmifera PE=2 SV=1)

HSP 1 Score: 245.358 bits (625), Expect = 2.263e-64
Identity = 117/151 (77.48%), Postives = 134/151 (88.74%), Query Frame = -3
Query:  247 GYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDFLKEIQ 699
            GY FELIQRGPTPEPLCQVMLRVGDL R++KF EKALGM+LLR +++PEY  T+ M+GYAEE ++ VLELTYNYGVTEYTKGNAYAQ+AI TDDVYKSAEVV +V QELGGKITR+ G +PGL TKI SF+DPDGWK VLVDNEDFLKE++
Sbjct:  133 GYTFELIQRGPTPEPLCQVMLRVGDLDRAVKFMEKALGMRLLRRIERPEYN-TIGMMGYAEEYESIVLELTYNYGVTEYTKGNAYAQIAIGTDDVYKSAEVVKIVNQELGGKITREAGPLPGLGTKIVSFLDPDGWKQVLVDNEDFLKELE 282          

HSP 2 Score: 107.842 bits (268), Expect = 5.639e-23
Identity = 57/123 (46.34%), Postives = 74/123 (60.16%), Query Frame = -3
Query:  277 VMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLV 645
            V+ RVGDL R+I+FY +  GMK+LR  D PE KY+ A LG+  E    V+ELTYNYGV+ Y  G  +   AIST DV K  E V    +  GG +TR+PG + G  + I    DPDG+   L+
Sbjct:   21 VVYRVGDLDRTIQFYTECFGMKVLRKRDVPEEKYSNAFLGFGPETSNFVVELTYNYGVSSYDIGTGFGHFAISTQDVSKMVEAV----RAKGGNVTREPGPVKGGGSVIAFVKDPDGYTFELI 139          
BLAST of CN181548 vs. ExPASy Swiss-Prot
Match: LGUL_VIBCH (Probable lactoylglutathione lyase OS=Vibrio cholerae GN=gloA PE=3 SV=2)

HSP 1 Score: 130.954 bits (328), Expect = 6.221e-30
Identity = 62/129 (48.06%), Postives = 84/129 (65.12%), Query Frame = -3
Query:  268 LCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNE 654
            +   MLRVGDL +SI+FY + +GM LLR  +  EYKYTLA LGY +E Q  V+ELTYN+GV +Y KGNAY  +AI  DD+Y + + +    +  GG +TR+PG + G  T I    DPDG+   L+ N+
Sbjct:    6 ILHTMLRVGDLDKSIEFYTQVMGMSLLRKNENTEYKYTLAFLGYGDESQGAVIELTYNWGVADYEKGNAYGHIAIGVDDIYATCDTI----KAAGGIVTREPGPVKGGTTHIAFVKDPDGYMIELIQNK 130          
BLAST of CN181548 vs. ExPASy Swiss-Prot
Match: LGUL_HAEIN (Lactoylglutathione lyase OS=Haemophilus influenzae GN=gloA PE=1 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 6.221e-30
Identity = 63/129 (48.84%), Postives = 84/129 (65.12%), Query Frame = -3
Query:  268 LCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNE 654
            +   MLRVGDL RSIKFY+  LGM+LLRT + PEYKYTLA LGY + +    +ELTYN+GV +Y  G AY  +AI  DD+Y + E V    +  GG +TR+ G + G +T I    DPDG+K   ++N+
Sbjct:    3 ILHTMLRVGDLDRSIKFYQDVLGMRLLRTSENPEYKYTLAFLGYEDGESAAEIELTYNWGVDKYEHGTAYGHIAIGVDDIYATCEAV----RASGGNVTREAGPVKGGSTVIAFVEDPDGYKIEFIENK 127          
BLAST of CN181548 vs. ExPASy Swiss-Prot
Match: LGUL_SHIFL (Lactoylglutathione lyase OS=Shigella flexneri GN=gloA PE=3 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 6.878e-29
Identity = 63/130 (48.46%), Postives = 85/130 (65.38%), Query Frame = -3
Query:  265 LCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNED 654
            L   MLRVGDL RSI FY K LGMKLLRT + PEYKY+LA +GY  E +  V+ELTYN+GV +Y  G AY  +A+S D+  ++ E +    ++ GG +TR+ G + G  T I    DPDG+K  L++ +D
Sbjct:    3 LLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGVDKYELGTAYGHIALSVDNAAEACEKI----RQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIEEKD 128          
BLAST of CN181548 vs. ExPASy Swiss-Prot
Match: LGUL_ECOLI (Lactoylglutathione lyase OS=Escherichia coli (strain K12) GN=gloA PE=1 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 6.878e-29
Identity = 63/130 (48.46%), Postives = 85/130 (65.38%), Query Frame = -3
Query:  265 LCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNED 654
            L   MLRVGDL RSI FY K LGMKLLRT + PEYKY+LA +GY  E +  V+ELTYN+GV +Y  G AY  +A+S D+  ++ E +    ++ GG +TR+ G + G  T I    DPDG+K  L++ +D
Sbjct:    3 LLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGVDKYELGTAYGHIALSVDNAAEACEKI----RQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIEEKD 128          
BLAST of CN181548 vs. ExPASy Swiss-Prot
Match: LGUL_ECO57 (Lactoylglutathione lyase OS=Escherichia coli O157:H7 GN=gloA PE=3 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 6.878e-29
Identity = 63/130 (48.46%), Postives = 85/130 (65.38%), Query Frame = -3
Query:  265 LCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNED 654
            L   MLRVGDL RSI FY K LGMKLLRT + PEYKY+LA +GY  E +  V+ELTYN+GV +Y  G AY  +A+S D+  ++ E +    ++ GG +TR+ G + G  T I    DPDG+K  L++ +D
Sbjct:    3 LLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGVDKYELGTAYGHIALSVDNAAEACEKI----RQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIEEKD 128          
BLAST of CN181548 vs. ExPASy Swiss-Prot
Match: LGUL_SALTY (Lactoylglutathione lyase OS=Salmonella typhimurium GN=gloA PE=3 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.173e-28
Identity = 63/130 (48.46%), Postives = 85/130 (65.38%), Query Frame = -3
Query:  265 LCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNED 654
            L   MLRVGDL RSI FY   LGMKLLRT + PEYKY+LA +GY  E +  V+ELTYN+GV  Y  GNAY  +A+S D+  ++ E +    ++ GG +TR+ G + G +T I    DPDG+K  L++ +D
Sbjct:    3 LLHTMLRVGDLQRSIAFYTNVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGVESYDMGNAYGHIALSVDNAAEACERI----RQNGGNVTREAGPVKGGSTIIAFVEDPDGYKIELIEAKD 128          
BLAST of CN181548 vs. ExPASy Swiss-Prot
Match: LGUL_SALTI (Lactoylglutathione lyase OS=Salmonella typhi GN=gloA PE=3 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.173e-28
Identity = 63/130 (48.46%), Postives = 85/130 (65.38%), Query Frame = -3
Query:  265 LCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNED 654
            L   MLRVGDL RSI FY   LGMKLLRT + PEYKY+LA +GY  E +  V+ELTYN+GV  Y  GNAY  +A+S D+  ++ E +    ++ GG +TR+ G + G +T I    DPDG+K  L++ +D
Sbjct:    3 LLHTMLRVGDLQRSIAFYTNVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGVESYDMGNAYGHIALSVDNAAEACERI----RQNGGNVTREAGPVKGGSTIIAFVEDPDGYKIELIEAKD 128          
BLAST of CN181548 vs. ExPASy Swiss-Prot
Match: LGUL_VIBPA (Probable lactoylglutathione lyase OS=Vibrio parahaemolyticus GN=gloA PE=3 SV=2)

HSP 1 Score: 124.79 bits (312), Expect = 4.458e-28
Identity = 59/129 (45.74%), Postives = 83/129 (64.34%), Query Frame = -3
Query:  268 LCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNE 654
            +   MLRVGDL +SIKFY + +GM+LLRT +  EY+YTLA +GY +E Q  V+ELTYN+G TEY  G A+  +AI  DD+Y + + +    +  GG +TR+ G + G  T I    DPDG+   L+ N+
Sbjct:    6 ILHTMLRVGDLDKSIKFYTEVMGMQLLRTNENKEYEYTLAFVGYGDESQGAVIELTYNWGKTEYDLGTAFGHIAIGVDDIYATCDAI----KAAGGNVTREAGPVKGGTTHIAFVKDPDGYMIELIQNK 130          
The following BLAST results are available for this feature:
BLAST of CN181548 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 14
Match NameE-valueIdentityDescription
LGUL_ORYSJ5.561e-7184.77Lactoylglutathione lyase OS=Oryza sativa subsp. ja... [more]
LGUL_BRAOG2.263e-6477.48Putative lactoylglutathione lyase OS=Brassica oler... [more]
LGUL_VIBCH6.221e-3048.06Probable lactoylglutathione lyase OS=Vibrio choler... [more]
LGUL_HAEIN6.221e-3048.84Lactoylglutathione lyase OS=Haemophilus influenzae... [more]
LGUL_SHIFL6.878e-2948.46Lactoylglutathione lyase OS=Shigella flexneri GN=g... [more]
LGUL_ECOLI6.878e-2948.46Lactoylglutathione lyase OS=Escherichia coli (stra... [more]
LGUL_ECO576.878e-2948.46Lactoylglutathione lyase OS=Escherichia coli O157:... [more]
LGUL_SALTY1.173e-2848.46Lactoylglutathione lyase OS=Salmonella typhimurium... [more]
LGUL_SALTI1.173e-2848.46Lactoylglutathione lyase OS=Salmonella typhi GN=gl... [more]
LGUL_VIBPA4.458e-2845.74Probable lactoylglutathione lyase OS=Vibrio paraha... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001B19_f Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001B19, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN181548 ID=CN181548; Name=CN181548; organism=Citrus sinensis; type=EST; length=701bp
TTTTTTTTTTTTTTTTTAGAAAAAAAACAAATGCTGCCATACCCATTTAA
TCCAAATTTAAGCAGTAGATCTCAATTTAATAATTCATCACATCACATAG
CAGCAAACCACCGATATCGTAACAGGCATATCGGTGGCTTTCAATACCAG
ACACGGTAATTTATTCATACAGATAGTACAGTAGTAGGATTTATTTTGAT
GCAAGTGTTTTGCAAAACTCCTCCTACCATGACATCATTATTCCGACTGA
ATTTCCTTCAGAAAATCTTCATTGTCAACCAGGACCGTTTTCCAGCCATC
TGGGTCTACGAAAGAGGTGATTTTGGTGTTGAGTCCAGGGATTGATCCGG
GTTGCCGAGTTATCTTCCCTCCAAGCTCTTGGGTAACCAGGTTGACAACC
TCAGCACTTTTGTATACATCATCAGTACTAATAGCAACCTGCGCATATGC
ATTTCCCTTGGTATATTCAGTCACACCATAATTATAAGTTAACTCCAGAA
CAGTAGTCTGATCTTCCTCAGCATATCCAAGCATGGCCAGGGTGTACTTG
TATTCAGGTTTATCAACTGTTCTTAACAGTTTCATCCCCAAAGCCTTTTC
ATAGAACTTGATGGAGCGACCAAGATCGCCAACGCGAAGCATTACTTGAC
AGAGTGGTTCAGGAGTTGGACCTCTCTGGATGAGTTCAAAAATATAACCA
T
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