CN181531

Overview
NameCN181531
Unique NameCN181531
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length742
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CN181531_ssr679 microsatellite CN181531_ssr679:679..690. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig5131 contig Csv1_Contig5131:839..1580. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN181531 vs. ExPASy Swiss-Prot
Match: MDARS_CUCSA (Monodehydroascorbate reductase, seedling isozyme OS=Cucumis sativus PE=2 SV=1)

HSP 1 Score: 332.413 bits (851), Expect = 1.554e-90
Identity = 161/198 (81.31%), Postives = 176/198 (88.89%), Query Frame = -1
Query:  149 GEVKEVKLKDGRTLEADIVVVGVGGRPLISLFKGQVAENKGGIETDDFFKTSADDVYAVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMATEGGKTVTGYDYLPYFYSRAFDLSWQFYGDNVGDTVLFGDNDLASATHKFGTYWIKDGKVVGVFLESGTPEENKAIAKVARVQPSVESLDVLKNEGLSFASKI 742
            GEVKEVKLKDGR LEADIVVVGVG RPL SLFKGQ+ E KGGI+TD+FFKTS  DVYAVGDVATFP+KLY E+RRVEHVDH+RKSAEQAVK I A+E GK +  YDYLPYFYSR+FDLSWQFYGDNVGD VLFGDN   SATHKFG+YWIKDGKVVG FLESG+PEENKAIAKVAR+QPSVES D+L  EG+SFASK+
Sbjct:  237 GEVKEVKLKDGRVLEADIVVVGVGARPLTSLFKGQIVEEKGGIKTDEFFKTSVPDVYAVGDVATFPLKLYNELRRVEHVDHSRKSAEQAVKAIKASEEGKAIEEYDYLPYFYSRSFDLSWQFYGDNVGDAVLFGDNSPDSATHKFGSYWIKDGKVVGAFLESGSPEENKAIAKVARIQPSVESSDLLLKEGISFASKV 434          
BLAST of CN181531 vs. ExPASy Swiss-Prot
Match: MDAR_SOLLC (Monodehydroascorbate reductase OS=Solanum lycopersicum GN=AFRR PE=1 SV=1)

HSP 1 Score: 319.316 bits (817), Expect = 1.361e-86
Identity = 159/198 (80.30%), Postives = 173/198 (87.37%), Query Frame = -1
Query:  149 GEVKEVKLKDGRTLEADIVVVGVGGRPLISLFKGQVAENKGGIETDDFFKTSADDVYAVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMATEGGKTVTGYDYLPYFYSRAFDLSWQFYGDNVGDTVLFGDNDLASATHKFGTYWIKDGKVVGVFLESGTPEENKAIAKVARVQPSVESLDVLKNEGLSFASKI 742
            GEVKEVKLKDGR LEADIVVVGVG RPL +LFKGQV E KGGI+TD FFKTS  DVYAVGDVATFP+K+Y E+RRVEHVDH+RKSAEQAVK I A+E GK+V  YDYLPYFYSRAFDLSWQFYGDNVG+TVLFGD D  SATHKFG YWIKDGK+VG FLESG+PEENKAIAKVA+VQP   +LD L  EG+SFASKI
Sbjct:  237 GEVKEVKLKDGRVLEADIVVVGVGARPLTTLFKGQVEEEKGGIKTDAFFKTSVPDVYAVGDVATFPLKMYNEIRRVEHVDHSRKSAEQAVKAIFASEQGKSVDEYDYLPYFYSRAFDLSWQFYGDNVGETVLFGDADPNSATHKFGQYWIKDGKIVGAFLESGSPEENKAIAKVAKVQPPA-TLDQLAQEGISFASKI 433          
BLAST of CN181531 vs. ExPASy Swiss-Prot
Match: MDAR_PEA (Monodehydroascorbate reductase OS=Pisum sativum PE=1 SV=1)

HSP 1 Score: 318.931 bits (816), Expect = 1.778e-86
Identity = 156/198 (78.79%), Postives = 172/198 (86.87%), Query Frame = -1
Query:  149 GEVKEVKLKDGRTLEADIVVVGVGGRPLISLFKGQVAENKGGIETDDFFKTSADDVYAVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMATEGGKTVTGYDYLPYFYSRAFDLSWQFYGDNVGDTVLFGDNDLASATHKFGTYWIKDGKVVGVFLESGTPEENKAIAKVARVQPSVESLDVLKNEGLSFASKI 742
            GEVKEVKLKDGR LEADIV+VGVGGRP ISLFKGQV E  GGI+TD FFKTS  DVYAVGDVATFP+KLY ++RRVEHVDHARKSAEQA K I A + GK+V  YDYLPYFYSR+FDLSWQFYGDNVG+TVLFGDND AS+  KFGTYWIK+GKVVG FLE GTP+ENKAIAKVAR +P+VE ++ L  EGLSFASKI
Sbjct:  236 GEVKEVKLKDGRVLEADIVIVGVGGRPQISLFKGQVEEQHGGIKTDSFFKTSVPDVYAVGDVATFPLKLYNDVRRVEHVDHARKSAEQAAKAIFAADVGKSVEEYDYLPYFYSRSFDLSWQFYGDNVGETVLFGDNDPASSKPKFGTYWIKEGKVVGAFLEGGTPDENKAIAKVARAKPAVEDVNQLAEEGLSFASKI 433          
BLAST of CN181531 vs. ExPASy Swiss-Prot
Match: MDAR4_ARATH (Probable monodehydroascorbate reductase, cytoplasmic isoform 4 OS=Arabidopsis thaliana GN=At5g03630 PE=1 SV=1)

HSP 1 Score: 316.235 bits (809), Expect = 1.152e-85
Identity = 155/198 (78.28%), Postives = 170/198 (85.86%), Query Frame = -1
Query:  149 GEVKEVKLKDGRTLEADIVVVGVGGRPLISLFKGQVAENKGGIETDDFFKTSADDVYAVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMATEGGKTVTGYDYLPYFYSRAFDLSWQFYGDNVGDTVLFGDNDLASATHKFGTYWIKDGKVVGVFLESGTPEENKAIAKVARVQPSVESLDVLKNEGLSFASKI 742
            GEV EVKLKDGRTLEADIV+VGVGGRP+ISLFK QV E KGG++TD FFKTS  DVYA+GDVATFPMKLY EMRRVEHVDHARKSAEQAVK I A E G ++  YDYLPYFYSRAFDLSWQFYGDNVG++VLFGDND  S   KFG+YWIK+ KVVG FLE G+PEEN AIAK+AR QPSVESL+VL  EGLSFA+ I
Sbjct:  238 GEVTEVKLKDGRTLEADIVIVGVGGRPIISLFKDQVEEEKGGLKTDGFFKTSLPDVYAIGDVATFPMKLYNEMRRVEHVDHARKSAEQAVKAIKAAEEGNSIPEYDYLPYFYSRAFDLSWQFYGDNVGESVLFGDNDPESPKPKFGSYWIKERKVVGAFLEGGSPEENNAIAKLARAQPSVESLEVLSKEGLSFATNI 435          
BLAST of CN181531 vs. ExPASy Swiss-Prot
Match: MDAR1_ARATH (Probable monodehydroascorbate reductase, cytoplasmic isoform 1 OS=Arabidopsis thaliana GN=At3g09940 PE=2 SV=1)

HSP 1 Score: 299.286 bits (765), Expect = 1.458e-80
Identity = 149/197 (75.63%), Postives = 164/197 (83.25%), Query Frame = -1
Query:  152 GEVKEVKLKDGRTLEADIVVVGVGGRPLISLFKGQVAENKGGIETDDFFKTSADDVYAVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMATEGGKTVTGYDYLPYFYSRAFDLSWQFYGDNVGDTVLFGDNDLASATHKFGTYWIKDGKVVGVFLESGTPEENKAIAKVARVQPSVESLDVLKNEGLSFASK 742
            GEV EVKL+DGRTLEA+IVV GVG RP  SLFKGQ+ E KGGI+TD FFKTS  DVYA+GDVATFPMK+Y   RRVEH D+ARKSA QAVK I A E GKT+  YDYLPYFYSR F LSW+FYG+NVG++VLFGDND  S   KFGTYW+KDGKVVGVFLE GT EE+KAIAKVAR QPSVESLDVL  EGLSFA+K
Sbjct:  239 GEVTEVKLEDGRTLEANIVVAGVGARPATSLFKGQLEEEKGGIKTDGFFKTSVPDVYALGDVATFPMKMYGGTRRVEHADNARKSAAQAVKAIKAGEEGKTIPDYDYLPYFYSRFFKLSWEFYGENVGESVLFGDNDPKSPKPKFGTYWVKDGKVVGVFLEGGTQEEHKAIAKVARAQPSVESLDVLSEEGLSFATK 435          
BLAST of CN181531 vs. ExPASy Swiss-Prot
Match: MDAR3_ARATH (Probable monodehydroascorbate reductase, cytoplasmic isoform 3 OS=Arabidopsis thaliana GN=At3g52880 PE=1 SV=1)

HSP 1 Score: 296.975 bits (759), Expect = 7.234e-80
Identity = 141/198 (71.21%), Postives = 170/198 (85.86%), Query Frame = -1
Query:  149 GEVKEVKLKDGRTLEADIVVVGVGGRPLISLFKGQVAENKGGIETDDFFKTSADDVYAVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMATEGGKTVTGYDYLPYFYSRAFDLSWQFYGDNVGDTVLFGDNDLASATHKFGTYWIKDGKVVGVFLESGTPEENKAIAKVARVQPSVESLDVLKNEGLSFASKI 742
            GEVKEV+LKDGRTLEADIV+VGVG +PL SLFKGQV E+KGGI+TD FFKTS  DVYAVGDVATFP+K+Y ++RRVEHVDH+RKSAEQAVK I A EGG  V  YDYLP+FYSR+FDLSWQFYGDNVGD+VLFGD++ ++   +FG YW++ GKVVG F+E G+ +ENKA+AKVA+ +PS ESLD L  +G+SFA+KI
Sbjct:  237 GEVKEVQLKDGRTLEADIVIVGVGAKPLTSLFKGQVEEDKGGIKTDAFFKTSVPDVYAVGDVATFPLKMYGDVRRVEHVDHSRKSAEQAVKAIKAAEGGAAVEEYDYLPFFYSRSFDLSWQFYGDNVGDSVLFGDSNPSNPKPRFGAYWVQGGKVVGAFMEGGSGDENKALAKVAKARPSAESLDELVKQGISFAAKI 434          
BLAST of CN181531 vs. ExPASy Swiss-Prot
Match: MDARF_CUCSA (Monodehydroascorbate reductase, fruit isozyme (Fragments) OS=Cucumis sativus PE=1 SV=1)

HSP 1 Score: 198.749 bits (504), Expect = 2.681e-50
Identity = 113/185 (61.08%), Postives = 125/185 (67.57%), Query Frame = -1
Query:  182 VKEVKLKDGRTLEADIVVVGVGGRPLISLFKGQVAENKGGIETDDFFKTSADDVYAVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMATEGGKTVTGYDYLPYFYSRAFDLSWQFYGDNVGDTVLFGDNDLASATHKFGTYWIKDGKVVGVFLESGTPEENKAIAKVARVQPSVESLDVL 736
            V+ +KLKDGRTL+ADIVVVGVGGRPL+SLFK                 TS  DVYAVGDVAT+P+KLY E+RRVEHVDHAR S E+                YDYLPYFYSR F+L+WQFYGDNVG+TVLF DN        FGTYWI   KVVGVFLE GTP+E     KVARVQP VESLD L
Sbjct:   28 VEAIKLKDGRTLDADIVVVGVGGRPLVSLFK-----------------TSIPDVYAVGDVATYPLKLYNELRRVEHVDHARLSIEE----------------YDYLPYFYSRTFNLAWQFYGDNVGETVLFPDN--------FGTYWI---KVVGVFLEGGTPDE----YKVARVQPPVESLDQL 164          
BLAST of CN181531 vs. ExPASy Swiss-Prot
Match: MDAR2_ARATH (Probable monodehydroascorbate reductase, cytoplasmic isoform 2 OS=Arabidopsis thaliana GN=At3g27820 PE=2 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 1.921e-48
Identity = 104/199 (52.26%), Postives = 133/199 (66.83%), Query Frame = -1
Query:  149 EVKEVKLKDGRTLEADIVVVGVGGRPLISLFKGQVAENKGGIETDDFFKTSADDVYAVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMATEGGKTVTG-YDYLPYFYSRAFDLSWQFYGDNVGDTVLFGDNDLASATHKFGTYWIKDGKVVGVFLESGTPEENKAIAKVARVQPSVE-SLDVLKNEGLSFASKI 739
            +V  V LKDG  L AD+VVVG+G RP  SLF+GQ+   KGGI+ +   ++S   VYA+GDVATFP+KL+ EMRR+EHVD ARKSA  AV  IM        TG +DYLP+FYSR F  SWQFYGD  GD V FG+ +   +   FG YW+K G +VG FLE GT EE + I+K  +++P+V   L+ L+ EGL FA  +
Sbjct:  237 KVTAVNLKDGSHLPADLVVVGIGIRPNTSLFEGQLTIEKGGIKVNSRMQSSDSSVYAIGDVATFPVKLFGEMRRLEHVDSARKSARHAVSAIM----DPIKTGDFDYLPFFYSRVFAFSWQFYGDPTGDVVHFGEYEDGKS---FGAYWVKKGHLVGSFLEGGTKEEYETISKATQLKPAVTIDLEELEREGLGFAHTV 428          
BLAST of CN181531 vs. ExPASy Swiss-Prot
Match: MDARP_ARATH (Monodehydroascorbate reductase, chloroplastic OS=Arabidopsis thaliana GN=At1g63940 PE=2 SV=3)

HSP 1 Score: 178.333 bits (451), Expect = 3.750e-44
Identity = 95/207 (45.89%), Postives = 130/207 (62.80%), Query Frame = -1
Query:  149 GEVKEVKLKDGRTLEADIVVVGVGGRPLISLFKGQVAENK--GGIETDDFFKTSADDVYAVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMATEGGKTVTGYDYLPYFYSRAFDLS-------WQFYGDNVGDTVLFGDNDLASATHKFGTYWIKDGKVVGVFLESGTPEENKAIAKVARVQPSVESLDVLKNEGLSFASKI 742
            G V  VKL DG T+EAD VV+G+G +P I  F+  +A NK  GGI+ D  F+TS   ++A+GDVA FP+K+Y  M RVEHVDHAR+SA+  VK+++          YDYLPYFYSR F+         WQF+GDNVG+TV  G+ D      K  T+WI+ G++ GV +ESG+PEE + + K+AR QP V+   +     +  A +I
Sbjct:  290 GRVSAVKLADGSTIEADTVVIGIGAKPAIGPFE-TLAMNKSIGGIQVDGLFRTSTPGIFAIGDVAAFPLKIYDRMTRVEHVDHARRSAQHCVKSLLTAH----TDTYDYLPYFYSRVFEYEGSPRKVWWQFFGDNVGETVEVGNFD-----PKIATFWIESGRLKGVLVESGSPEEFQLLPKLARSQPLVDKAKLASASSVEEALEI 486          
BLAST of CN181531 vs. ExPASy Swiss-Prot
Match: AIFM3_HUMAN (Apoptosis-inducing factor 3 OS=Homo sapiens GN=AIFM3 PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 7.138e-11
Identity = 52/186 (27.96%), Postives = 89/186 (47.85%), Query Frame = -1
Query:  203 GEVKEVKLKDGRTLEADIVVVGVGGRPLISLFK--GQVAENKGGIETDDFFKTSADDVYAVGDVATFPMKLYREMRRVE--HVDHARKSAEQAVKTIMATEGGKTVTGYDYLPYFYSRAFDLSWQF--YGDNVGDTVLFGDNDLASATHKFGTYWIKDGKVVGVFLESGTPEENKAIAKVARVQPS 742
            G++KEV LK  + + AD+ VVG+G  P     +  G   +++G I  +   +T+   V+A GD  TFP+  +R  R+V   H   A      A + ++A E   +      +PY ++  F  S ++  YG+   D ++ GD +      KF  ++ K  +V+ V   +  P     ++KVA V  S
Sbjct:  405 GKLKEVVLKSSKVVRADVCVVGIGAVPATGFLRQSGIGLDSRGFIPVNKMMQTNVPGVFAAGDAVTFPL-AWRNNRKVNIPHWQMAHAQGRVAAQNMLAQEAEMST-----VPYLWTAMFGKSLRYAGYGEGFDDVIIQGDLE----ELKFVAFYTKGDEVIAVASMNYDP----IVSKVAEVLAS 576          
The following BLAST results are available for this feature:
BLAST of CN181531 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 10
Match NameE-valueIdentityDescription
MDARS_CUCSA1.554e-9081.31Monodehydroascorbate reductase, seedling isozyme O... [more]
MDAR_SOLLC1.361e-8680.30Monodehydroascorbate reductase OS=Solanum lycopers... [more]
MDAR_PEA1.778e-8678.79Monodehydroascorbate reductase OS=Pisum sativum PE... [more]
MDAR4_ARATH1.152e-8578.28Probable monodehydroascorbate reductase, cytoplasm... [more]
MDAR1_ARATH1.458e-8075.63Probable monodehydroascorbate reductase, cytoplasm... [more]
MDAR3_ARATH7.234e-8071.21Probable monodehydroascorbate reductase, cytoplasm... [more]
MDARF_CUCSA2.681e-5061.08Monodehydroascorbate reductase, fruit isozyme (Fra... [more]
MDAR2_ARATH1.921e-4852.26Probable monodehydroascorbate reductase, cytoplasm... [more]
MDARP_ARATH3.750e-4445.89Monodehydroascorbate reductase, chloroplastic OS=A... [more]
AIFM3_HUMAN7.138e-1127.96Apoptosis-inducing factor 3 OS=Homo sapiens GN=AIF... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS04_0001B09_f Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001B09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN181531 ID=CN181531; Name=CN181531; organism=Citrus sinensis; type=EST; length=742bp
TTTTTGGAACAAATTATAGCGTTTATTTAACCAAATCCCAAACGTAGACT
TACAAAACCAACAAGTTTAAAAGCAAATAAGATATATTTTTCAAAACAGT
CGCTCTGAAATCACAATATTATTATCCCCTCTAAATAAAGCATTCTCAGA
TCTTGCTAGCAAAGGAAAGACCCTCATTTTTCAGCACATCCAAGCTTTCA
ACTGAAGGTTGGACCCTAGCAACTTTGGCAATGGCTTTGTTTTCTTCTGG
AGTTCCACTCTCAAGAAAAACCCCAACAACTTTTCCATCTTTGATCCAGT
ATGTTCCAAACTTATGGGTTGCTGATGCCAGATCGTTGTCCCCAAACAGC
ACGGTGTCACCGACATTGTCTCCATAGAACTGCCATGACAGATCAAAGGC
ACGAGAATAGAAGTATGGGAGATAGTCGTATCCAGTAACTGTTTTACCTC
CCTCAGTTGCCATGATGGTCTTCACAGCCTGCTCAGCTGATTTGCGGGCA
TGGTCAACATGCTCAACTCTTCTCATTTCCCGGTACAATTTCATAGGGAA
AGTCGCCACATCCCCTACAGCGTACACATCATCAGCACTTGTCTTGAAAA
AATCATCAGTCTCTATGCCTCCTTTATTCTCTGCAACCTGCCCTTTAAAT
AATGATATAAGAGGTCTTCCTCCTACACCAACAACAACAATGTCAGCTTC
CAGAGTCCTGCCGTCCTTCAGCTTCACTTCTTTGACCTCTCC
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