CN181522

Overview
NameCN181522
Unique NameCN181522
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length617
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN181522 vs. ExPASy Swiss-Prot
Match: EXPA6_ARATH (Expansin-A6 OS=Arabidopsis thaliana GN=EXPA6 PE=2 SV=2)

HSP 1 Score: 347.821 bits (891), Expect = 2.520e-95
Identity = 157/189 (83.07%), Postives = 178/189 (94.18%), Query Frame = 2
Query:   53 GVILS-LVCLMWVADARLPGDYSGGPWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFEIKCANEPAWCHSGSPSILVTATNFCPPNYALPSDNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKKGGIRFTINGFRYFNLVLVTNVAGAGDILRVNV 616
            G++LS L  ++ +++AR+PG Y+GG W++AHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNG SCGACFE+KCA++P WCHSGSPSI +TATNFCPPN+A PSDNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVS+RRVPCRK+GGIRFTINGFRYFNLVLVTNVAGAG+I+R+ V
Sbjct:    5 GLVLSVLTTILALSEARIPGVYNGGGWETAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGFSCGACFELKCASDPKWCHSGSPSIFITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVSFRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGNIVRLGV 193          
BLAST of CN181522 vs. ExPASy Swiss-Prot
Match: EXPA4_ARATH (Expansin-A4 OS=Arabidopsis thaliana GN=EXPA4 PE=1 SV=1)

HSP 1 Score: 346.665 bits (888), Expect = 5.613e-95
Identity = 156/187 (83.42%), Postives = 172/187 (91.98%), Query Frame = 2
Query:   56 VILSLVCLMWVADARLPGDYSGGPWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFEIKCANEPAWCHSGSPSILVTATNFCPPNYALPSDNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKKGGIRFTINGFRYFNLVLVTNVAGAGDILRVNV 616
            ++ +   L  +ADAR+PG YSGG WQ+AHATFYGGSDASGTMGGACGYGNLYSQGYG NTAALSTALFNNG+SCGACFE+KCAN+P WCHSGSPSIL+TATNFCPPN A PSDNGGWCNPPR HFDLAMP+FLKIA+YRAGIVPVSYRRVPCRK+GGIRFTING RYFNLVL+TNVAGAGDI+R +V
Sbjct:    7 ILFTTFVLFSLADARIPGIYSGGAWQNAHATFYGGSDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGMSCGACFELKCANDPQWCHSGSPSILITATNFCPPNLAQPSDNGGWCNPPREHFDLAMPVFLKIAQYRAGIVPVSYRRVPCRKRGGIRFTINGHRYFNLVLITNVAGAGDIVRASV 193          
BLAST of CN181522 vs. ExPASy Swiss-Prot
Match: EXPA7_ORYSJ (Expansin-A7 OS=Oryza sativa subsp. japonica GN=EXPA7 PE=2 SV=1)

HSP 1 Score: 341.273 bits (874), Expect = 2.358e-93
Identity = 156/178 (87.64%), Postives = 164/178 (92.13%), Query Frame = 2
Query:   89 ADARLPGDYSGGPWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFEIKCANEPAW--CHSGSPSILVTATNFCPPNYALPSDNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKKGGIRFTINGFRYFNLVLVTNVAGAGDILRVNV 616
            A  R+PG Y GG WQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVN AALSTALFN+G SCGACFEIKC N+P W  CH GSPSIL+TATNFCPPNYALPSDNGGWCNPPRPHFDLAMPMFL IAEYRAGIVPVSYRRVPCRKKGG+RFTINGFRYFNLVL+TNVAGAGDI+R +V
Sbjct:   23 AAGRIPGAYGGGEWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNNAALSTALFNSGQSCGACFEIKCVNQPGWEWCHPGSPSILITATNFCPPNYALPSDNGGWCNPPRPHFDLAMPMFLHIAEYRAGIVPVSYRRVPCRKKGGVRFTINGFRYFNLVLITNVAGAGDIVRASV 200          
BLAST of CN181522 vs. ExPASy Swiss-Prot
Match: EXPA3_ARATH (Expansin-A3 OS=Arabidopsis thaliana GN=EXPA3 PE=2 SV=1)

HSP 1 Score: 332.798 bits (852), Expect = 8.388e-91
Identity = 155/190 (81.58%), Postives = 167/190 (87.89%), Query Frame = 2
Query:   47 WAGVILSLVCLMWVADARLPGDYSGGPWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFEIKCANEPAWCHSGSPSILVTATNFCPPNYALPSDNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKKGGIRFTINGFRYFNLVLVTNVAGAGDILRVNV 616
            W  V  S   L+   +A++PG YSGGPWQ+AHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNG SCGACFEIKC ++P WC  G+PSILVTATNFCPPN+A PSD+GGWCNPPR HFDLAMPMFLKI  YRAGIVPVSYRRVPCRK GGIRFT+NGFRYFNLVLVTNVAGAGDI  V+V
Sbjct:   11 WLAVTASF--LLTATNAKIPGVYSGGPWQNAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGFSCGACFEIKCTDDPRWCVPGNPSILVTATNFCPPNFAQPSDDGGWCNPPREHFDLAMPMFLKIGLYRAGIVPVSYRRVPCRKIGGIRFTVNGFRYFNLVLVTNVAGAGDINGVSV 198          
BLAST of CN181522 vs. ExPASy Swiss-Prot
Match: EXPA9_ARATH (Expansin-A9 OS=Arabidopsis thaliana GN=EXPA9 PE=2 SV=1)

HSP 1 Score: 327.405 bits (838), Expect = 3.524e-89
Identity = 145/183 (79.23%), Postives = 167/183 (91.26%), Query Frame = 2
Query:   68 LVCLMWVADARLPGDYSGGPWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFEIKCANEPAWCHSGSPSILVTATNFCPPNYALPSDNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKKGGIRFTINGFRYFNLVLVTNVAGAGDILRVNV 616
            +V   + A+A++PG Y+GGPW +AHATFYG +DASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCG+CFE+KC N+P WC  G+PSIL+TATNFCPPN+   SDNGGWCNPPR HFDLAMPMFL IA+Y+AGIVPVSYRR+PCRKKGGIRFTINGF+YFNLVLVTNVAGAGD+++V+V
Sbjct:   12 MVVTAFTANAKIPGVYTGGPWINAHATFYGEADASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGSCFELKCINDPGWCLPGNPSILITATNFCPPNFNQASDNGGWCNPPREHFDLAMPMFLSIAKYKAGIVPVSYRRIPCRKKGGIRFTINGFKYFNLVLVTNVAGAGDVIKVSV 194          
BLAST of CN181522 vs. ExPASy Swiss-Prot
Match: EXP16_ARATH (Expansin-A16 OS=Arabidopsis thaliana GN=EXPA16 PE=2 SV=1)

HSP 1 Score: 323.553 bits (828), Expect = 5.089e-88
Identity = 147/186 (79.03%), Postives = 161/186 (86.56%), Query Frame = 2
Query:   59 ILSLVCLMWVADARLPGDYSGGPWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFEIKCANEPAWCHSGSPSILVTATNFCPPNYALPSDNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKKGGIRFTINGFRYFNLVLVTNVAGAGDILRVNV 616
            I  L  L+   DA +P  +SGG WQ+AHATFYGG+DASGTMGGACGYGNLYSQGYG NTAALST+LFN+G SCGACFEIKC N+P WCH G+PS+ VTATNFCPPN A PSDNGGWCNPPR HFDLAMP+FLKIAEYRAGIVP+SYRRV CRK GGIRFTING RYFNLVL+TNVAGAGDI R +V
Sbjct:   11 IFPLFLLLSFTDAGIPRVFSGGSWQTAHATFYGGNDASGTMGGACGYGNLYSQGYGTNTAALSTSLFNSGQSCGACFEIKCVNDPKWCHPGNPSVFVTATNFCPPNLAQPSDNGGWCNPPRSHFDLAMPVFLKIAEYRAGIVPISYRRVACRKSGGIRFTINGHRYFNLVLITNVAGAGDIARTSV 196          
BLAST of CN181522 vs. ExPASy Swiss-Prot
Match: EXPA4_ORYSJ (Expansin-A4 OS=Oryza sativa subsp. japonica GN=EXPA4 PE=2 SV=1)

HSP 1 Score: 280.026 bits (715), Expect = 6.453e-75
Identity = 131/186 (70.43%), Postives = 152/186 (81.72%), Query Frame = 2
Query:   59 ILSLVCLMWVADARLPGDYSGGPWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFEIKCANEPAWCHSGSPSILVTATNFCPPNYALPSDNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKKGGIRFTINGFRYFNLVLVTNVAGAGDILRVNV 616
            I  ++ L+++A       Y G  WQSAHATFYGG DASGTMGGACGYGNLYSQGYG NTAALSTALFN+G +CG+C+E++C N  + C  GS  I VTATNFCPPNY LPSD+GGWCNPPRPHFD+A P FL IA+YRAGIVPVS+RRVPC KKGG+RFT+NG  YFNLVLVTNVAGAGD+  V++
Sbjct:    3 IAGVLFLLFLARQASAAGYGG--WQSAHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNDGAACGSCYELRCDNAGSSCLPGS--ITVTATNFCPPNYGLPSDDGGWCNPPRPHFDMAEPAFLHIAQYRAGIVPVSFRRVPCVKKGGVRFTVNGHSYFNLVLVTNVAGAGDVRSVSI 184          
BLAST of CN181522 vs. ExPASy Swiss-Prot
Match: EXPA4_ORYSI (Expansin-A4 OS=Oryza sativa subsp. indica GN=EXPA4 PE=2 SV=1)

HSP 1 Score: 280.026 bits (715), Expect = 6.453e-75
Identity = 131/186 (70.43%), Postives = 152/186 (81.72%), Query Frame = 2
Query:   59 ILSLVCLMWVADARLPGDYSGGPWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFEIKCANEPAWCHSGSPSILVTATNFCPPNYALPSDNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKKGGIRFTINGFRYFNLVLVTNVAGAGDILRVNV 616
            I  ++ L+++A       Y G  WQSAHATFYGG DASGTMGGACGYGNLYSQGYG NTAALSTALFN+G +CG+C+E++C N  + C  GS  I VTATNFCPPNY LPSD+GGWCNPPRPHFD+A P FL IA+YRAGIVPVS+RRVPC KKGG+RFT+NG  YFNLVLVTNVAGAGD+  V++
Sbjct:    3 IAGVLFLLFLARQASAAGYGG--WQSAHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNDGAACGSCYELRCDNAGSSCLPGS--ITVTATNFCPPNYGLPSDDGGWCNPPRPHFDMAEPAFLHIAQYRAGIVPVSFRRVPCVKKGGVRFTVNGHSYFNLVLVTNVAGAGDVRSVSI 184          
BLAST of CN181522 vs. ExPASy Swiss-Prot
Match: EXPA1_ARATH (Expansin-A1 OS=Arabidopsis thaliana GN=EXPA1 PE=2 SV=1)

HSP 1 Score: 279.641 bits (714), Expect = 8.427e-75
Identity = 126/163 (77.30%), Postives = 143/163 (87.73%), Query Frame = 2
Query:  113 YSGGPWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFEIKCANEPAWCHSGSPSILVTATNFCPPNYALPSDNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKKGGIRFTINGFRYFNLVLVTNVAGAGDI 601
            Y+GG W +AHATFYGG DASGTMGGACGYGNLYSQGYG NTAALSTALFNNGLSCGACFEI+C N+  WC  GS  I+VTATNFCPPN ALP++ GGWCNPP+ HFDL+ P+F +IA+YRAGIVPV+YRRVPC ++GGIRFTING  YFNLVL+TNV GAGD+
Sbjct:   22 YAGGGWVNAHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGACFEIRCQNDGKWCLPGS--IVVTATNFCPPNNALPNNAGGWCNPPQQHFDLSQPVFQRIAQYRAGIVPVAYRRVPCVRRGGIRFTINGHSYFNLVLITNVGGAGDV 182          
BLAST of CN181522 vs. ExPASy Swiss-Prot
Match: EXPA2_ORYSJ (Expansin-A2 OS=Oryza sativa subsp. japonica GN=EXPA2 PE=2 SV=2)

HSP 1 Score: 278.1 bits (710), Expect = 2.452e-74
Identity = 128/173 (73.99%), Postives = 143/173 (82.66%), Query Frame = 2
Query:   98 RLPGDYSGGPWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFEIKCANEPAWCHSGSPSILVTATNFCPPNYALPSDNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKKGGIRFTINGFRYFNLVLVTNVAGAGDILRVNV 616
            R   DY  G WQSAHATFYGG DASGTMGGACGYGNLYS GYG NTAALST LFN+G +CG+C+E++C N+  WC  GS  + VTATN CPPNYALP+D+GGWCNPPRPHFD+A P FL+I  YRAGIVPVSYRRVPC KKGGIRFTING  YFNLVLVTNVAG GD+  V++
Sbjct:   21 RAAADY--GSWQSAHATFYGGGDASGTMGGACGYGNLYSTGYGTNTAALSTVLFNDGAACGSCYELRCDNDGQWCLPGS--VTVTATNLCPPNYALPNDDGGWCNPPRPHFDMAEPAFLQIGVYRAGIVPVSYRRVPCVKKGGIRFTINGHSYFNLVLVTNVAGPGDVQSVSI 189          
The following BLAST results are available for this feature:
BLAST of CN181522 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 91
Match NameE-valueIdentityDescription
EXPA6_ARATH2.520e-9583.07Expansin-A6 OS=Arabidopsis thaliana GN=EXPA6 PE=2 ... [more]
EXPA4_ARATH5.613e-9583.42Expansin-A4 OS=Arabidopsis thaliana GN=EXPA4 PE=1 ... [more]
EXPA7_ORYSJ2.358e-9387.64Expansin-A7 OS=Oryza sativa subsp. japonica GN=EXP... [more]
EXPA3_ARATH8.388e-9181.58Expansin-A3 OS=Arabidopsis thaliana GN=EXPA3 PE=2 ... [more]
EXPA9_ARATH3.524e-8979.23Expansin-A9 OS=Arabidopsis thaliana GN=EXPA9 PE=2 ... [more]
EXP16_ARATH5.089e-8879.03Expansin-A16 OS=Arabidopsis thaliana GN=EXPA16 PE=... [more]
EXPA4_ORYSJ6.453e-7570.43Expansin-A4 OS=Oryza sativa subsp. japonica GN=EXP... [more]
EXPA4_ORYSI6.453e-7570.43Expansin-A4 OS=Oryza sativa subsp. indica GN=EXPA4... [more]
EXPA1_ARATH8.427e-7577.30Expansin-A1 OS=Arabidopsis thaliana GN=EXPA1 PE=2 ... [more]
EXPA2_ORYSJ2.452e-7473.99Expansin-A2 OS=Oryza sativa subsp. japonica GN=EXP... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001B04_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001B04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN181522 ID=CN181522; Name=CN181522; organism=Citrus sinensis; type=EST; length=617bp
GAGGTTTGTGAGTGAAGAGAATAAAGAAACGATGGCGGTGGTGAATTGGG
CTGGCGTTATCCTCTCTTTAGTATGCTTAATGTGGGTGGCTGATGCAAGA
CTCCCTGGCGATTACTCCGGTGGCCCATGGCAAAGCGCCCATGCCACCTT
TTACGGCGGCTCTGACGCCTCCGGCACCATGGGAGGAGCGTGCGGTTACG
GTAACTTGTACAGCCAGGGCTACGGCGTGAATACGGCGGCGCTGAGCACG
GCGCTGTTCAACAATGGCTTGAGCTGCGGTGCTTGCTTTGAGATCAAGTG
TGCAAACGAACCCGCGTGGTGTCACTCCGGGAGCCCTTCCATTTTGGTTA
CCGCTACAAACTTTTGCCCGCCCAATTACGCACTCCCAAGTGACAATGGC
GGCTGGTGTAACCCTCCTCGCCCTCATTTTGACCTCGCCATGCCCATGTT
CCTCAAGATTGCTGAGTACCGCGCCGGCATCGTCCCCGTCTCCTACCGCC
GGGTACCATGCCGCAAGAAGGGAGGAATCAGGTTCACAATAAACGGGTTC
CGCTACTTCAACTTGGTTCTGGTCACCAACGTGGCGGGTGCAGGGGATAT
CCTGAGGGTGAACGTGA
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