CN188594

Overview
NameCN188594
Unique NameCN188594
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length735
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig328 contig Csv1_Contig328:497..1231. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN188594 vs. ExPASy Swiss-Prot
Match: ORYA_ORYSJ (Oryzain alpha chain OS=Oryza sativa subsp. japonica GN=Os04g0650000 PE=1 SV=2)

HSP 1 Score: 231.106 bits (588), Expect = 4.801e-60
Identity = 97/151 (64.24%), Postives = 114/151 (75.50%), Query Frame = -1
Query:  283 GYGTEKGADYWIVKNSWGSSWGEGGYIRMERNVAGTLTGKCGIAMEASYXXXXXXXXXXXXXXXXXXXXXPAVCDNYYSCPESNTCCCVFEYGNSCFAWGCCPLEAATCCDDHYSCCPHDYPICNVRAGTCLMSKDNPLGVRALRRTPAKP 735
            GYGTE G DYWIV+NSWG SWGE GY+RMERN+  + +GKCGIA+E SY                     P VCDNYY+CP+S TCCC++EYG  C+AWGCCPLE ATCCDDHYSCCPH+YPICNV+ GTCLM+KD+PL V+AL+RT AKP
Sbjct:  295 GYGTENGKDYWIVRNSWGKSWGESGYVRMERNIKAS-SGKCGIAVEPSYPLKKGENPPNPGPTPPSPTPPPTVCDNYYTCPDSTTCCCIYEYGKYCYAWGCCPLEGATCCDDHYSCCPHEYPICNVQQGTCLMAKDSPLAVKALKRTLAKP 444          
BLAST of CN188594 vs. ExPASy Swiss-Prot
Match: RD21A_ARATH (Cysteine proteinase RD21a OS=Arabidopsis thaliana GN=RD21A PE=1 SV=1)

HSP 1 Score: 229.565 bits (584), Expect = 1.397e-59
Identity = 95/158 (60.13%), Postives = 117/158 (74.05%), Query Frame = -1
Query:  262 GYGTEKGADYWIVKNSWGSSWGEGGYIRMERNVAGTLTGKCGIAMEASYXXXXXXXXXXXXXXXXXXXXXPAVCDNYYSCPESNTCCCVFEYGNSCFAWGCCPLEAATCCDDHYSCCPHDYPICNVRAGTCLMSKDNPLGVRALRRTPAKPYWAHGNQ 735
            GYGTE G DYWIV+NSWG SWGE GY+RM RN+A + +GKCGIA+E SY                     P  CD+YY+CPESNTCCC+FEYG  CFAWGCCPLEAATCCDD+YSCCPH+YP+C++  GTCL+SK++P  V+AL+R PA P+W+ G +
Sbjct:  303 GYGTENGKDYWIVRNSWGKSWGESGYLRMARNIASS-SGKCGIAIEPSYPIKNGENPPNPGPSPPSPIKPPTQCDSYYTCPESNTCCCLFEYGKYCFAWGCCPLEAATCCDDNYSCCPHEYPVCDLDQGTCLLSKNSPFSVKALKRKPATPFWSQGRK 459          
BLAST of CN188594 vs. ExPASy Swiss-Prot
Match: CYSPL_SOLLC (Low-temperature-induced cysteine proteinase (Fragment) OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 201.06 bits (510), Expect = 5.321e-51
Identity = 87/159 (54.72%), Postives = 107/159 (67.30%), Query Frame = -1
Query:  259 GYGTEKGADYWIVKNSWGSSWGEGGYIRMERNVAGTLTGKCGIAMEASYXXXXXXXXXXXXXXXXXXXXXPAVCDNYYSCPESNTCCCVFEYGNSCFAWGCCPLEAATCCDDHYSCCPHDYPICNVRAGTCLMSKDNPLGVRALRRTPAKPYWAHGNQG 735
            GYGTE G DYWIV+NSWG++  E GY+R++RNV+ + +G CG+A+E SY                     P  CD Y  C    TCCC+ ++  SCF+WGCCPLE ATCC+DHYSCCPHDYPICNVR GTC MSK NPLGV+A++R  A+P  A GN G
Sbjct:  184 GYGTENGMDYWIVRNSWGANCRENGYLRVQRNVSSS-SGLCGLAIEPSYPVKTGPNPPKPAPSPPSPVKPPTECDEYSQCAVGTTCCCILQFRRSCFSWGCCPLEGATCCEDHYSCCPHDYPICNVRQGTCSMSKGNPLGVKAMKRILAQPIGAFGNGG 341          
BLAST of CN188594 vs. ExPASy Swiss-Prot
Match: ORYB_ORYSJ (Oryzain beta chain OS=Oryza sativa subsp. japonica GN=Os04g0670200 PE=1 SV=2)

HSP 1 Score: 191.43 bits (485), Expect = 4.216e-48
Identity = 87/156 (55.77%), Postives = 101/156 (64.74%), Query Frame = -1
Query:  286 GYGTEKGADYWIVKNSWGSSWGEGGYIRMERNVAGTLTGKCGIAMEASYXXXXXXXXXXXXXXXXXXXXXPA------VCDNYYSCPESNTCCCVFEYGNSCFAWGCCPLEAATCCDDHYSCCPHDYPICNVRAGTCLMSKDNPLGVRALRRTPAK 735
            GYGT+ G DYWIV+NSWG  WGE GY+RMERN+  T TGKCGIAM ASY                     P       VCD+ +SCP  +TCCC F + N C  WGCCP+E ATCC DH SCCP DYP+CN RAGTC  SK++PL V+AL+RT AK
Sbjct:  308 GYGTDNGKDYWIVRNSWGPKWGESGYVRMERNINVT-TGKCGIAMMASYPTKSGANPPKPSPTPPTPPTPPPPSAPDHVCDDNFSCPAGSTCCCAFGFRNLCLVWGCCPVEGATCCKDHASCCPPDYPVCNTRAGTCSASKNSPLSVKALKRTLAK 462          
BLAST of CN188594 vs. ExPASy Swiss-Prot
Match: CYSP1_ORYSJ (Cysteine protease 1 OS=Oryza sativa subsp. japonica GN=CP1 PE=2 SV=2)

HSP 1 Score: 162.54 bits (410), Expect = 2.097e-39
Identity = 76/157 (48.41%), Postives = 88/157 (56.05%), Query Frame = -1
Query:  283 GYGTEK--GADYWIVKNSWGSSWGEGGYIRMERNVAGTLTGKCGIAMEASYXXXXXXXXXXXXXXXXXXXXXPAVCDNYYSCPESNTCCCVFEYGNSCFAWGCCPLEAATCCDDHYSCCPHDYPICNVRAGTCLMSKDNPLGVRA----LRRTPAKP 735
            GYGT+   GA YW V+NSWG  WGE GYIRMERNV    TGKCGIAM ASY                        CD Y  CP   TCCC +   N C  WGCCP+E ATCC DH +CCP +YP+CN +A TC  SK++P  +R      R  P +P
Sbjct:  323 GYGTDAATGAAYWTVRNSWGPDWGENGYIRMERNVTAR-TGKCGIAMMASYPIKKGPNPKPSPPSPAPSPPQQ--CDRYSKCPAGTTCCCNYGIRNHCIVWGCCPVEGATCCKDHSTCCPKEYPVCNAKARTCSKSKNSPYNIRTPAAMARSVPEQP 476          
BLAST of CN188594 vs. ExPASy Swiss-Prot
Match: GCP1_ARATH (Germination-specific cysteine protease 1 OS=Arabidopsis thaliana GN=GCP1 PE=2 SV=2)

HSP 1 Score: 86.6557 bits (213), Expect = 1.463e-16
Identity = 36/49 (73.47%), Postives = 42/49 (85.71%), Query Frame = -1
Query:  589 GYGTEKGADYWIVKNSWGSSWGEGGYIRMERNVAGTLTGKCGIAMEASY 735
            GYG+E G DYWIV+NSWG  WGE GYIRMERN+A + +GKCGIA+EASY
Sbjct:  311 GYGSENGVDYWIVRNSWGPRWGEEGYIRMERNLAASKSGKCGIAVEASY 359          
BLAST of CN188594 vs. ExPASy Swiss-Prot
Match: CYSP4_BRANA (Cysteine proteinase COT44 (Fragment) OS=Brassica napus PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 7.259e-16
Identity = 37/49 (75.51%), Postives = 43/49 (87.76%), Query Frame = -1
Query:  589 GYGTEKGADYWIVKNSWGSSWGEGGYIRMERNVAGTLTGKCGIAMEASY 735
            GYG+E G DYWIV+NSWG+ WGE GYIRMERNVA + +GKCGIA+EASY
Sbjct:  266 GYGSENGVDYWIVRNSWGTRWGEDGYIRMERNVA-SKSGKCGIAIEASY 313          
BLAST of CN188594 vs. ExPASy Swiss-Prot
Match: CYSP_HEMSP (Thiol protease SEN102 OS=Hemerocallis sp. GN=SEN102 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.673e-12
Identity = 34/50 (68.00%), Postives = 37/50 (74.00%), Query Frame = -1
Query:  589 GYG-TEKGADYWIVKNSWGSSWGEGGYIRMERNVAGTLTGKCGIAMEASY 735
            GYG T  G  YWIVKNSWG  WGE GYIRM+R ++    GKCGIAMEASY
Sbjct:  295 GYGATRDGTKYWIVKNSWGEEWGESGYIRMQRGISDK-RGKCGIAMEASY 343          
BLAST of CN188594 vs. ExPASy Swiss-Prot
Match: CPR4_ARATH (Probable cysteine proteinase At4g11320 OS=Arabidopsis thaliana GN=At4g11320 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.673e-12
Identity = 33/49 (67.35%), Postives = 37/49 (75.51%), Query Frame = -1
Query:  589 GYGTEKGADYWIVKNSWGSSWGEGGYIRMERNVAGTLTGKCGIAMEASY 735
            GYGTE G DYWIVKNS G +WGE GY++M RN+A    G CGIAM ASY
Sbjct:  310 GYGTENGRDYWIVKNSRGDTWGEAGYMKMARNIANP-RGLCGIAMRASY 357          
BLAST of CN188594 vs. ExPASy Swiss-Prot
Match: CPGP2_ZINOF (Zingipain-2 OS=Zingiber officinale PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.854e-12
Identity = 32/49 (65.31%), Postives = 35/49 (71.43%), Query Frame = -1
Query:  589 GYGTEKGADYWIVKNSWGSSWGEGGYIRMERNVAGTLTGKCGIAMEASY 735
            GYGTE   D+WIVKNSWG +WGE GYIR ERN+     GKCGI   ASY
Sbjct:  167 GYGTENDKDFWIVKNSWGKNWGESGYIRAERNIENP-DGKCGITRFASY 214          
The following BLAST results are available for this feature:
BLAST of CN188594 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 21
Match NameE-valueIdentityDescription
ORYA_ORYSJ4.801e-6064.24Oryzain alpha chain OS=Oryza sativa subsp. japonic... [more]
RD21A_ARATH1.397e-5960.13Cysteine proteinase RD21a OS=Arabidopsis thaliana ... [more]
CYSPL_SOLLC5.321e-5154.72Low-temperature-induced cysteine proteinase (Fragm... [more]
ORYB_ORYSJ4.216e-4855.77Oryzain beta chain OS=Oryza sativa subsp. japonica... [more]
CYSP1_ORYSJ2.097e-3948.41Cysteine protease 1 OS=Oryza sativa subsp. japonic... [more]
GCP1_ARATH1.463e-1673.47Germination-specific cysteine protease 1 OS=Arabid... [more]
CYSP4_BRANA7.259e-1675.51Cysteine proteinase COT44 (Fragment) OS=Brassica n... [more]
CYSP_HEMSP1.673e-1268.00Thiol protease SEN102 OS=Hemerocallis sp. GN=SEN10... [more]
CPR4_ARATH1.673e-1267.35Probable cysteine proteinase At4g11320 OS=Arabidop... [more]
CPGP2_ZINOF2.854e-1265.31Zingipain-2 OS=Zingiber officinale PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0006G05_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0006G05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188594 ID=CN188594; Name=CN188594; organism=Citrus sinensis; type=EST; length=735bp
CTTTTTTAATACACAATTTGTTTGTGCATTGTTCGGATTCAACGCAGATA
CCATTCTTACAACGCTATATACAAAACCAACGTCCGAATAAATATTTAAC
AGACCATCCACCTGCCGGTACATTAACGTTTGAAATGAAATGCAGTAAAA
TGAACTAAGGCCGGGGAGAAACTCATTCACAAGCACGAATATCTTCATCC
TCGCTTCGGCCTTCCACTGCTCTTACAGTGCCAACTATAATTAAGCACTG
CTACTTCCACCTTGATTTCCATGAGCCCAGTAAGGTTTAGCAGGGGTGCG
TCGCAATGCCCTCACTCCCAATGGGTTGTCCTTGCTCATCAAGCAGGTCC
CAGCACGAACATTACAGATGGGATAGTCATGTGGGCAGCAGCTATAGTGG
TCATCACAGCAGGTGGCAGCCTCGAGCGGGCAGCATCCCCATGCAAAGCA
AGAGTTACCATACTCAAAGACACAGCAGCAAGTGTTGCTCTCAGGGCAAG
AGTAATAATTGTCACACACAGCAGGAGGCTTTGTTGGAGATGGAGGAGAC
GGTCCGGGGTTGGGAGGATTTTGGCCTTTCTTTATGGGATATGAGGCCTC
CATGGCAATTCCACACTTGCCCGTGAGAGTGCCAGCCACGTTACGCTCCA
TCCTAATATAGCCACCCTCTCCCCAGCTACTGCCCCATGAATTCTTCACA
ATCCAGTAATCAGCTCCCTTTTCTGTGCCATATCC
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