CN181502

Overview
NameCN181502
Unique NameCN181502
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length510
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CN181502 vs. ExPASy Swiss-Prot
Match: ATP5H_ARATH (ATP synthase subunit d, mitochondrial OS=Arabidopsis thaliana GN=At3g52300 PE=1 SV=3)

HSP 1 Score: 132.109 bits (331), Expect = 1.443e-30
Identity = 68/98 (69.39%), Postives = 77/98 (78.57%), Query Frame = -1 
Query:  220 DEVNSTLQTKFSQEPEPIDWEYYRKGIGSRLVDMYKQAYESIEVPKYVDKVTPEYKSKFDALLVELKEAEGKSPNARTPL-KSIRNSKRSSMMKSGMT 510
            DEVN+ LQTKFSQEPEPIDW+YYRKGIG+ +VD YK+AY+SIE+PKYVDKVTPEYK KFDALLVELKEAE KS      L K I + +  S   S MT
Sbjct:   45 DEVNTQLQTKFSQEPEPIDWDYYRKGIGAGIVDKYKEAYDSIEIPKYVDKVTPEYKPKFDALLVELKEAEQKSLKESERLEKEIADVQEISKKLSTMT 142
The following BLAST results are available for this feature:
BLAST of CN181502 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
ATP5H_ARATH1.443e-3069.39ATP synthase subunit d, mitochondrial OS=Arabidops... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS04_0001A18_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001A18, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN181502 ID=CN181502; Name=CN181502; organism=Citrus sinensis; type=EST; length=510bp
GAGGGTTAAAATGTATGCATTGCCACGAAAACTGAATGTTTAGCATAGAT
GTGATCAAAGCTCAAATTTTGAAACCATGAGCAACAGGTTTATGCAAAAA
CAATTCGAATGATCATTATTATTTAACAAGCTGGGAAAACAGGGCAACTT
CAGAAAATCTTGGCCGAGCTAGGAAATGCAGCTGCTAAATTGAGCAAATG
TGTGATCAATAGCCCCAGTAGTCATTCCTGATTTCATCATCGAACTTCTT
TTTGAGTTCCGGATGCTTTTCAAAGGAGTCCGAGCGTTTGGAGATTTCCC
TTCTGCTTCTTTCAATTCCACCAGCAAAGCATCAAACTTAGATTTGTATT
CAGGGGTGACTTTGTCTACATACTTTGGGACCTCTATGCTTTCATAAGCC
TGTTTGTACATGTCCACCAAGCGAGAGCCAATTCCTTTTCTGTAATACTC
CCAGTCAATAGGTTCAGGTTCCTGGCTGAACTTGGTCTGAAGAGTGGAGT
TGACTTCGTC
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