CN181501

Overview
NameCN181501
Unique NameCN181501
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length449
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CN181501 vs. ExPASy Swiss-Prot
Match: ATP5H_ARATH (ATP synthase subunit d, mitochondrial OS=Arabidopsis thaliana GN=At3g52300 PE=1 SV=3)

HSP 1 Score: 93.5893 bits (231), Expect = 4.059e-19
Identity = 50/78 (64.10%), Postives = 58/78 (74.36%), Query Frame = 1 
Query:    1 EYYRKGIGSRLVDMYKQAYESIEVPKYVDKVTPEYKSKFDALLVELKEAEGKSPNARTPL-KSIRNSKRSSMMKSGMT 231
            +YYRKGIG+ +VD YK+AY+SIE+PKYVDKVTPEYK KFDALLVELKEAE KS      L K I + +  S   S MT
Sbjct:   65 DYYRKGIGAGIVDKYKEAYDSIEIPKYVDKVTPEYKPKFDALLVELKEAEQKSLKESERLEKEIADVQEISKKLSTMT 142
The following BLAST results are available for this feature:
BLAST of CN181501 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
ATP5H_ARATH4.059e-1964.10ATP synthase subunit d, mitochondrial OS=Arabidops... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS04_0001A18_f Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001A18, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN181501 ID=CN181501; Name=CN181501; organism=Citrus sinensis; type=EST; length=449bp
GAGTATTACAGAAAAGGAATTGGCTCTCGCTTGGTGGACATGTACAAACA
GGCTTATGAAAGCATAGAGGTCCCAAAGTATGTAGACAAAGTCACCCCTG
AATACAAATCTAAGTTTGATGCTTTGCTGGTGGAATTGAAAGAAGCAGAA
GGGAAATCTCCAAACGCTCGGACTCCTTTGAAAAGCATCCGGAACTCAAA
AAGAAGTTCGATGATGAAATCAGGAATGACTACTGGGGCTATTGATCACA
CATTTGCTCAATTTAGCAGCTGCATTTCCTAGCTCGGCCAAGATTTTCTG
AAGTTGCCCTGTTTTCCCAGCTTGTTAAATAATAATGATCATTCGAATTG
TTTTTGCATAAACCTGTTGCTCATGGTTTCAAAATTTGAGCTTTGATCAC
ATCTATGCTAAACATTCAGTTTTCGTGGCAATGCATACATTTTAACCCT
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