CN181498

Overview
NameCN181498
Unique NameCN181498
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length680
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8291 contig Csv1_Contig8291:33..712. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN181498 vs. ExPASy Swiss-Prot
Match: AL2C4_ARATH (Aldehyde dehydrogenase family 2 member C4 OS=Arabidopsis thaliana GN=ALDH2C4 PE=1 SV=2)

HSP 1 Score: 266.544 bits (680), Expect = 8.933e-71
Identity = 135/213 (63.38%), Postives = 156/213 (73.24%), Query Frame = 2
Query:   50 LSNGSCK--SLFKMPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSR-ALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEXTPLIALYFAHLAKLAGV 679
            + NG C   +  K+PEIKFTKLFING+F+D+ SGKTFETIDPR GE IA IAEGDKEDVDLAV AAR AFDHGPWPR +G ER  ++ KFAD                 GKL    K  DIP  A   RY AGAADKIHGE LKM+R +L GYTL+EPIGVVG+IIPWNFP+ MF  KV+PA+AAGCTM+VKPAE T L AL++AHL+K AG+
Sbjct:    1 MENGKCNGATTVKLPEIKFTKLFINGQFIDAASGKTFETIDPRNGEVIATIAEGDKEDVDLAVNAARYAFDHGPWPRMTGFERAKLINKFADLIEENIEELAKLDAVDGGKLFQLGKYADIPATAGHFRYNAGAADKIHGETLKMTRQSLFGYTLKEPIGVVGNIIPWNFPSIMFATKVAPAMAAGCTMVVKPAEQTSLSALFYAHLSKEAGI 213          
BLAST of CN181498 vs. ExPASy Swiss-Prot
Match: AL2B4_ARATH (Aldehyde dehydrogenase family 2 member B4, mitochondrial OS=Arabidopsis thaliana GN=ALDH2B4 PE=1 SV=1)

HSP 1 Score: 197.593 bits (501), Expect = 5.096e-50
Identity = 102/197 (51.78%), Postives = 122/197 (61.93%), Query Frame = 2
Query:   89 EIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEXTPLIALYFAHLAKLAGV 679
            ++  T+L ING FVDS SGKTF T+DPRTGE IA +AEGD ED++ AVKAAR AFD GPWP+ S  ER  ++L+FAD                 GK +  +   +IP  A   RYYAG ADKIHG  +      Q +TL EPIGV G IIPWNFP  MF  KV PALA G T+++K AE TPL A Y   L   AG+
Sbjct:   54 QVSHTQLLINGNFVDSASGKTFPTLDPRTGEVIAHVAEGDAEDINRAVKAARTAFDEGPWPKMSAYERSRVLLRFADLVEKHSEELASLETWDNGKPYQQSLTAEIPMFARLFRYYAGWADKIHGLTIPADGNYQVHTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLTAFYAGKLFLEAGL 250          
BLAST of CN181498 vs. ExPASy Swiss-Prot
Match: AL2B7_ARATH (Aldehyde dehydrogenase family 2 member B7, mitochondrial OS=Arabidopsis thaliana GN=ALDH2B7 PE=2 SV=2)

HSP 1 Score: 181.03 bits (458), Expect = 4.936e-45
Identity = 94/197 (47.72%), Postives = 119/197 (60.41%), Query Frame = 2
Query:   89 EIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEXTPLIALYFAHLAKLAGV 679
            +++ T+L I G FVD+VSGKTF T+DPR GE IA+++EGD EDV+ AV AAR+AFD GPWP+ +  ER  I+ +FAD                 GK +  +   ++P  A   RYYAG ADKIHG  +         TL EPIGV G IIPWNFP  M   K+ PALA G T+++K AE TPL AL    L   AG+
Sbjct:   50 KVEHTQLLIGGRFVDAVSGKTFPTLDPRNGEVIAQVSEGDAEDVNRAVAAARKAFDEGPWPKMTAYERSKILFRFADLIEKHNDEIAALETWDNGKPYEQSAQIEVPMLARVFRYYAGWADKIHGMTMPGDGPHHVQTLHEPIGVAGQIIPWNFPLLMLSWKLGPALACGNTVVLKTAEQTPLSALLVGKLLHEAGL 246          
BLAST of CN181498 vs. ExPASy Swiss-Prot
Match: AL1A1_HUMAN (Retinal dehydrogenase 1 OS=Homo sapiens GN=ALDH1A1 PE=1 SV=2)

HSP 1 Score: 180.259 bits (456), Expect = 8.419e-45
Identity = 97/197 (49.24%), Postives = 119/197 (60.41%), Query Frame = 2
Query:   89 EIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHG-PWPRFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEXTPLIALYFAHLAKLAG 676
            +I++TK+FIN E+ DSVSGK F   +P T E + ++ EGDKEDVD AVKAARQAF  G PW     +ER  ++ K AD                 GKL+S A + D+ G   TLRY AG ADKI G  + +      YT  EPIGV G IIPWNFP  M   K+ PAL+ G T++VKPAE TPL AL+ A L K AG
Sbjct:   17 KIQYTKIFINNEWHDSVSGKKFPVFNPATEEELCQVEEGDKEDVDKAVKAARQAFQIGSPWRTMDASERGRLLYKLADLIERDRLLLATMESMNGGKLYSNAYLNDLAGCIKTLRYCAGWADKIQGRTIPIDGNFFTYTRHEPIGVCGQIIPWNFPLVMLIWKIGPALSCGNTVVVKPAEQTPLTALHVASLIKEAG 213          
BLAST of CN181498 vs. ExPASy Swiss-Prot
Match: AL1A1_CHICK (Retinal dehydrogenase 1 OS=Gallus gallus GN=ALDH1A1 PE=2 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 8.419e-45
Identity = 96/197 (48.73%), Postives = 118/197 (59.90%), Query Frame = 2
Query:   89 EIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHG-PWPRFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEXTPLIALYFAHLAKLAG 676
            +IK+TK+FIN E+ DSVSGK FE  +P   E I  +AEGDK D+D AVKAAR+AF+ G PW     +ER  ++ K AD                 GKL S A + D+     T+RY AG ADKIHG  + M      +T  EP+GV G IIPWNFP  MF  K++PAL  G T++VKPAE TPL ALY   L K AG
Sbjct:   25 KIKYTKIFINNEWHDSVSGKKFEVFNPANEEKICEVAEGDKADIDKAVKAARKAFELGSPWRTMDASERGRLLNKLADLVERDRLTLATMEAIDGGKLFSTAYLMDLGACIKTIRYCAGWADKIHGRTVPMDGNFFTFTRHEPVGVCGQIIPWNFPLVMFIWKIAPALCCGNTVVVKPAEQTPLSALYMGSLIKEAG 221          
BLAST of CN181498 vs. ExPASy Swiss-Prot
Match: ALDH_ENCBU (Aldehyde dehydrogenase OS=Enchytraeus buchholzi GN=ALDH PE=2 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 1.436e-44
Identity = 97/197 (49.24%), Postives = 121/197 (61.42%), Query Frame = 2
Query:   89 EIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRG-IMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEXTPLIALYFAHLAKLAG 676
            +++FTK+FIN EFVDSVSGKTF TI+P TGE +A + EGDK D+D AV AAR AF      R   A  RG ++ K AD                 GK  + + +GD   A   LRYYAG ADKI G+ +     +  YT  EP+GVVG I PWNFP  +   K++PA+AAGCT+++KPAE TPL ALY A L K AG
Sbjct:   14 KVEFTKIFINNEFVDSVSGKTFATINPSTGEKLAEVQEGDKADIDKAVAAARAAFKRDAEYRKHDASDRGRLLFKLADLIEAHRVQLRTLETLDNGKPFAMSYLGDTLMAQKVLRYYAGFADKIVGQTIPADGNVFCYTRHEPVGVVGAITPWNFPLHLAASKIAPAIAAGCTLVLKPAEQTPLTALYLASLVKQAG 210          
BLAST of CN181498 vs. ExPASy Swiss-Prot
Match: AL1A1_MACFA (Retinal dehydrogenase 1 OS=Macaca fascicularis GN=ALDH1A1 PE=2 SV=3)

HSP 1 Score: 177.948 bits (450), Expect = 4.178e-44
Identity = 96/197 (48.73%), Postives = 118/197 (59.90%), Query Frame = 2
Query:   89 EIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHG-PWPRFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEXTPLIALYFAHLAKLAG 676
            +I++TK+FIN E+ DSVSGK F   +P T E + ++ EGDK DVD AVKAARQAF  G PW     +ER  ++ K AD                 GKL+S A + D+ G   TLRY AG ADKI G  + +      YT  EPIGV G IIPWNFP  M   K+ PAL+ G T++VKPAE TPL AL+ A L K AG
Sbjct:   17 KIQYTKIFINNEWHDSVSGKKFPVFNPATEEELCQVEEGDKADVDKAVKAARQAFQIGSPWRTMDASERGRLLYKLADLIERDRLLLATMESMNGGKLYSNAYLNDLAGCIKTLRYCAGWADKIQGRTIPIDGNFFTYTRHEPIGVCGQIIPWNFPLVMLIWKIGPALSCGNTVVVKPAEQTPLTALHVASLIKEAG 213          
BLAST of CN181498 vs. ExPASy Swiss-Prot
Match: AL1A1_RAT (Retinal dehydrogenase 1 OS=Rattus norvegicus GN=Aldh1a1 PE=1 SV=3)

HSP 1 Score: 177.178 bits (448), Expect = 7.127e-44
Identity = 95/197 (48.22%), Postives = 120/197 (60.91%), Query Frame = 2
Query:   89 EIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHG-PWPRFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEXTPLIALYFAHLAKLAG 676
            +I+ TK+FIN E+ DSVSGK F  ++P T E I  + EGDK DVD AVKAARQAF  G PW     +ER  ++ K AD                 GK+ + A + D+ G+   L+Y AG ADKIHG+ +     +  +T REPIGV G IIPWNFP  MF  K+ PAL+ G T++VKPAE TPL AL+ A L K AG
Sbjct:   17 KIQHTKIFINNEWHDSVSGKKFPVLNPATEEVICHVEEGDKADVDKAVKAARQAFQIGSPWRTMDASERGRLLNKLADLMERDRLLLATIEAINGGKVFANAYLSDLGGSIKALKYCAGWADKIHGQTIPSDGDIFTFTRREPIGVCGQIIPWNFPLLMFIWKIGPALSCGNTVVVKPAEQTPLTALHMASLIKEAG 213          
BLAST of CN181498 vs. ExPASy Swiss-Prot
Match: AL1A1_MOUSE (Retinal dehydrogenase 1 OS=Mus musculus GN=Aldh1a1 PE=1 SV=5)

HSP 1 Score: 176.407 bits (446), Expect = 1.216e-43
Identity = 95/197 (48.22%), Postives = 119/197 (60.41%), Query Frame = 2
Query:   89 EIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHG-PWPRFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEXTPLIALYFAHLAKLAG 676
            +I+ TK+FIN E+ +SVSGK F  ++P T E I  + EGDK DVD AVKAARQAF  G PW     +ER  ++ K AD                 GK+ + A + D+ G    L+Y AG ADKIHG+ +     +  YT REPIGV G IIPWNFP  MF  K+ PAL+ G T++VKPAE TPL AL+ A L K AG
Sbjct:   17 KIQHTKIFINNEWHNSVSGKKFPVLNPATEEVICHVEEGDKADVDKAVKAARQAFQIGSPWRTMDASERGRLLNKLADLMERDRLLLATMEALNGGKVFANAYLSDLGGCIKALKYCAGWADKIHGQTIPSDGDIFTYTRREPIGVCGQIIPWNFPMLMFIWKIGPALSCGNTVVVKPAEQTPLTALHLASLIKEAG 213          
BLAST of CN181498 vs. ExPASy Swiss-Prot
Match: AL1A1_SHEEP (Retinal dehydrogenase 1 OS=Ovis aries GN=ALDH1A1 PE=1 SV=2)

HSP 1 Score: 176.022 bits (445), Expect = 1.588e-43
Identity = 96/197 (48.73%), Postives = 115/197 (58.38%), Query Frame = 2
Query:   89 EIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHG-PWPRFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEXTPLIALYFAHLAKLAG 676
            + K+TK+FIN E+  SVSGK F   +P T E +  + EGDKEDVD AVKAARQAF  G PW     +ER  ++ K AD                 GKL S A + D+ G   TLRY AG ADKI G  + M      YT  EP+GV G IIPWNFP  MF  K+ PAL+ G T++VKPAE TPL AL+   L K AG
Sbjct:   17 QFKYTKIFINNEWHSSVSGKKFPVFNPATEEKLCEVEEGDKEDVDKAVKAARQAFQIGSPWRTMDASERGRLLNKLADLIERDRLLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGWADKIQGRTIPMDGNFFTYTRSEPVGVCGQIIPWNFPLLMFLWKIGPALSCGNTVVVKPAEQTPLTALHMGSLIKEAG 213          
The following BLAST results are available for this feature:
BLAST of CN181498 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 355
Match NameE-valueIdentityDescription
AL2C4_ARATH8.933e-7163.38Aldehyde dehydrogenase family 2 member C4 OS=Arabi... [more]
AL2B4_ARATH5.096e-5051.78Aldehyde dehydrogenase family 2 member B4, mitocho... [more]
AL2B7_ARATH4.936e-4547.72Aldehyde dehydrogenase family 2 member B7, mitocho... [more]
AL1A1_HUMAN8.419e-4549.24Retinal dehydrogenase 1 OS=Homo sapiens GN=ALDH1A1... [more]
AL1A1_CHICK8.419e-4548.73Retinal dehydrogenase 1 OS=Gallus gallus GN=ALDH1A... [more]
ALDH_ENCBU1.436e-4449.24Aldehyde dehydrogenase OS=Enchytraeus buchholzi GN... [more]
AL1A1_MACFA4.178e-4448.73Retinal dehydrogenase 1 OS=Macaca fascicularis GN=... [more]
AL1A1_RAT7.127e-4448.22Retinal dehydrogenase 1 OS=Rattus norvegicus GN=Al... [more]
AL1A1_MOUSE1.216e-4348.22Retinal dehydrogenase 1 OS=Mus musculus GN=Aldh1a1... [more]
AL1A1_SHEEP1.588e-4348.73Retinal dehydrogenase 1 OS=Ovis aries GN=ALDH1A1 P... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001A15_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001A15, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN181498 ID=CN181498; Name=CN181498; organism=Citrus sinensis; type=EST; length=680bp
GAGGTAATACCACAAAGATAGAGAAAGATAGAGAGAGATGGAGGGCAGTC
TTAGCAATGGAAGCTGCAAGTCTTTATTCAAGATGCCGGAGATCAAGTTC
ACGAAGCTGTTCATTAACGGAGAATTTGTTGATTCTGTTTCAGGGAAAAC
GTTTGAAACAATTGATCCAAGGACAGGAGAAGCAATAGCAAGAATTGCTG
AAGGAGACAAGGAGGATGTTGATCTTGCCGTCAAGGCAGCACGTCAGGCG
TTTGATCACGGTCCATGGCCACGTTTTTCTGGAGCCGAAAGGAGAGGGAT
AATGTTGAAGTTTGCGGACTTAATTGAAGAACACGCAGAGGTATTAGCGG
TGCTGGAAGCTCTTGATGCTGGCAAATTGCACAGTTGGGCCAAAATGGGC
GACATTCCAGGAGCTGCTAATACCCTTCGTTACTATGCTGGTGCAGCTGA
TAAAATACACGGAGAGGTTCTAAAAATGTCTCGGGCGTTACAGGGCTACA
CGTTGCGTGAGCCAATTGGCGTTGTTGGACACATCATTCCCTGGAATTTT
CCTACCACCATGTTTTTCATGAAGGTTAGCCCTGCGTTAGCCGCTGGGTG
CACAATGATTGTCAAGCCTGCTGAGCNAACTCCCCTTATTGCTCTTTATT
TTGCCCATCTTGCCAAGCTGGCTGGAGTAC
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