CN181497

Overview
NameCN181497
Unique NameCN181497
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length317
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN181497 vs. ExPASy Swiss-Prot
Match: AL2C4_ARATH (Aldehyde dehydrogenase family 2 member C4 OS=Arabidopsis thaliana GN=ALDH2C4 PE=1 SV=2)

HSP 1 Score: 130.183 bits (326), Expect = 3.189e-30
Identity = 61/99 (61.62%), Postives = 78/99 (78.79%), Query Frame = -3
Query:   16 KNEIFGPVMALMKFFFAEKTIKSANNKKNGLAAGIMTKDLNVANTVSRSIRKKIIWINCYFAFDSDCPYGGYKMSGFGRDCGKKSLHHYLQVKSKMAPI 312
            ++EIFGPVM+LMKF   E+ IK ANN K GLAAGI+++D+++ NTVSRSI+  IIW+NCYF FD DCPYGGYKMSG  R+ G  +L +YLQ KS + P+
Sbjct:  397 QDEIFGPVMSLMKFKTVEEGIKCANNTKYGLAAGILSQDIDLINTVSRSIKAGIIWVNCYFGFDLDCPYGGYKMSGNCRESGMDALDNYLQTKSVVMPL 495          
BLAST of CN181497 vs. ExPASy Swiss-Prot
Match: AL2B4_ARATH (Aldehyde dehydrogenase family 2 member B4, mitochondrial OS=Arabidopsis thaliana GN=ALDH2B4 PE=1 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 5.824e-24
Identity = 49/95 (51.58%), Postives = 72/95 (75.79%), Query Frame = -3
Query:   31 AKNEIFGPVMALMKFFFAEKTIKSANNKKNGLAAGIMTKDLNVANTVSRSIRKKIIWINCYFAFDSDCPYGGYKMSGFGRDCGKKSLHHYLQVKS 315
            A++EIFGPV +++KF   ++ IK AN  K GLAAG+ TK+L+ AN VSR+++   +W+NC+  FD+  P+GGYKMSG GR+ G  SL++YLQ+K+
Sbjct:  433 AQDEIFGPVQSILKFSDVDEVIKRANETKYGLAAGVFTKNLDTANRVSRALKAGTVWVNCFDVFDAAIPFGGYKMSGNGREKGIYSLNNYLQIKA 527          
BLAST of CN181497 vs. ExPASy Swiss-Prot
Match: ALDH2_MACPR (Aldehyde dehydrogenase, cytosolic 2 (Fragment) OS=Macroscelides proboscideus PE=2 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 1.695e-23
Identity = 50/95 (52.63%), Postives = 66/95 (69.47%), Query Frame = -3
Query:   31 AKNEIFGPVMALMKFFFAEKTIKSANNKKNGLAAGIMTKDLNVANTVSRSIRKKIIWINCYFAFDSDCPYGGYKMSGFGRDCGKKSLHHYLQVKS 315
            AK EIFGPV  +MKF   ++ IK ANN   GLAAG+ TKDL+ A TVS +++   +W+NCY A    CP+GG+KMSG GR+ G+  LH Y +VK+
Sbjct:  136 AKEEIFGPVQQIMKFKSLDEVIKRANNTFYGLAAGVFTKDLDKAVTVSAALQAGTVWVNCYMANSVQCPFGGFKMSGNGRELGEYGLHEYTEVKT 230          
BLAST of CN181497 vs. ExPASy Swiss-Prot
Match: AL1A1_MOUSE (Retinal dehydrogenase 1 OS=Mus musculus GN=Aldh1a1 PE=1 SV=5)

HSP 1 Score: 106.686 bits (265), Expect = 3.775e-23
Identity = 47/95 (49.47%), Postives = 66/95 (69.47%), Query Frame = -3
Query:   31 AKNEIFGPVMALMKFFFAEKTIKSANNKKNGLAAGIMTKDLNVANTVSRSIRKKIIWINCYFAFDSDCPYGGYKMSGFGRDCGKKSLHHYLQVKS 315
            AK EIFGPV  +MKF   +  IK ANN   GLAAG+ TKDL+ A TVS +++  ++W+NCY    + CP+GG+KMSG GR+ G+  L+ Y ++K+
Sbjct:  397 AKEEIFGPVQQIMKFKSVDDVIKRANNTTYGLAAGLFTKDLDKAITVSSALQAGVVWVNCYMMLSAQCPFGGFKMSGNGRELGEHGLYEYTELKT 491          
BLAST of CN181497 vs. ExPASy Swiss-Prot
Match: AL1A1_RAT (Retinal dehydrogenase 1 OS=Rattus norvegicus GN=Aldh1a1 PE=1 SV=3)

HSP 1 Score: 106.301 bits (264), Expect = 4.931e-23
Identity = 47/95 (49.47%), Postives = 66/95 (69.47%), Query Frame = -3
Query:   31 AKNEIFGPVMALMKFFFAEKTIKSANNKKNGLAAGIMTKDLNVANTVSRSIRKKIIWINCYFAFDSDCPYGGYKMSGFGRDCGKKSLHHYLQVKS 315
            AK EIFGPV  +MKF   +  IK ANN   GLAAG+ TKDL+ A TVS +++  ++W+NCY    + CP+GG+KMSG GR+ G+  L+ Y ++K+
Sbjct:  397 AKEEIFGPVQQIMKFKSIDDVIKRANNTTYGLAAGVFTKDLDRAITVSSALQAGVVWVNCYMILSAQCPFGGFKMSGNGRELGEHGLYEYTELKT 491          
BLAST of CN181497 vs. ExPASy Swiss-Prot
Match: AL1A7_MOUSE (Aldehyde dehydrogenase, cytosolic 1 OS=Mus musculus GN=Aldh1a7 PE=2 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 6.440e-23
Identity = 48/95 (50.53%), Postives = 66/95 (69.47%), Query Frame = -3
Query:   31 AKNEIFGPVMALMKFFFAEKTIKSANNKKNGLAAGIMTKDLNVANTVSRSIRKKIIWINCYFAFDSDCPYGGYKMSGFGRDCGKKSLHHYLQVKS 315
            AK EIFGPV  +MKF   +  IK ANN   GLAAG+ TKDL+ A TVS +++  ++W+NCY A    CP+GG+KMSG GR+ G+  L+ Y ++K+
Sbjct:  397 AKEEIFGPVQQIMKFKSMDDVIKRANNTTYGLAAGVFTKDLDKAITVSSALQAGMVWVNCYLAVPVQCPFGGFKMSGNGRELGEHGLYEYTELKT 491          
BLAST of CN181497 vs. ExPASy Swiss-Prot
Match: ALDH2_RAT (Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus GN=Aldh2 PE=1 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 1.874e-22
Identity = 48/95 (50.53%), Postives = 66/95 (69.47%), Query Frame = -3
Query:   31 AKNEIFGPVMALMKFFFAEKTIKSANNKKNGLAAGIMTKDLNVANTVSRSIRKKIIWINCYFAFDSDCPYGGYKMSGFGRDCGKKSLHHYLQVKS 315
            AK EIFGPVM ++KF   E+ +  ANN K GLAA + TKDL+ AN +S++++   +WINCY  F +  P+GGYKMSG GR+ G+  L  Y +VK+
Sbjct:  415 AKEEIFGPVMQILKFKTIEEVVGRANNSKYGLAAAVFTKDLDKANYLSQALQAGTVWINCYDVFGAQSPFGGYKMSGSGRELGEYGLQAYTEVKT 509          
BLAST of CN181497 vs. ExPASy Swiss-Prot
Match: ALDH2_MESAU (Aldehyde dehydrogenase, mitochondrial OS=Mesocricetus auratus GN=ALDH2 PE=1 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 1.874e-22
Identity = 48/95 (50.53%), Postives = 66/95 (69.47%), Query Frame = -3
Query:   31 AKNEIFGPVMALMKFFFAEKTIKSANNKKNGLAAGIMTKDLNVANTVSRSIRKKIIWINCYFAFDSDCPYGGYKMSGFGRDCGKKSLHHYLQVKS 315
            AK EIFGPVM ++KF   E+ +  ANN K GLAA + TKDL+ AN +S++++   +WINCY  F +  P+GGYKMSG GR+ G+  L  Y +VK+
Sbjct:  396 AKEEIFGPVMQILKFKTIEEVVGRANNSKYGLAAAVFTKDLDKANYLSQALQAGTVWINCYDVFGAQSPFGGYKMSGSGRELGEYGLQAYTEVKT 490          
BLAST of CN181497 vs. ExPASy Swiss-Prot
Match: AL1A7_RAT (Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus GN=Aldh1a7 PE=1 SV=2)

HSP 1 Score: 104.375 bits (259), Expect = 1.874e-22
Identity = 46/95 (48.42%), Postives = 66/95 (69.47%), Query Frame = -3
Query:   31 AKNEIFGPVMALMKFFFAEKTIKSANNKKNGLAAGIMTKDLNVANTVSRSIRKKIIWINCYFAFDSDCPYGGYKMSGFGRDCGKKSLHHYLQVKS 315
            AK EIFGPV  +MKF   ++ IK ANN   GLAAG+ TKDL+ A TVS +++   +W+NCY      CP+GG+KMSG GR+ G++ ++ Y ++K+
Sbjct:  397 AKEEIFGPVQQIMKFKSIDEVIKRANNTPYGLAAGVFTKDLDRAITVSSALQAGTVWVNCYLTLSVQCPFGGFKMSGNGREMGEQGVYEYTELKT 491          
BLAST of CN181497 vs. ExPASy Swiss-Prot
Match: ALDH2_HORSE (Aldehyde dehydrogenase, mitochondrial OS=Equus caballus GN=ALDH2 PE=1 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 2.447e-22
Identity = 48/95 (50.53%), Postives = 66/95 (69.47%), Query Frame = -3
Query:   31 AKNEIFGPVMALMKFFFAEKTIKSANNKKNGLAAGIMTKDLNVANTVSRSIRKKIIWINCYFAFDSDCPYGGYKMSGFGRDCGKKSLHHYLQVKS 315
            AK EIFGPVM ++KF   E+ +  ANN K GLAA + TKDL+ AN +S++++   +WINCY  F +  P+GGYKMSG GR+ G+  L  Y +VK+
Sbjct:  396 AKEEIFGPVMQILKFKTIEEVVGRANNSKYGLAAAVFTKDLDKANYLSQALQAGTVWINCYDVFGAQSPFGGYKMSGNGRELGEYGLQAYTEVKT 490          
The following BLAST results are available for this feature:
BLAST of CN181497 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 277
Match NameE-valueIdentityDescription
AL2C4_ARATH3.189e-3061.62Aldehyde dehydrogenase family 2 member C4 OS=Arabi... [more]
AL2B4_ARATH5.824e-2451.58Aldehyde dehydrogenase family 2 member B4, mitocho... [more]
ALDH2_MACPR1.695e-2352.63Aldehyde dehydrogenase, cytosolic 2 (Fragment) OS=... [more]
AL1A1_MOUSE3.775e-2349.47Retinal dehydrogenase 1 OS=Mus musculus GN=Aldh1a1... [more]
AL1A1_RAT4.931e-2349.47Retinal dehydrogenase 1 OS=Rattus norvegicus GN=Al... [more]
AL1A7_MOUSE6.440e-2350.53Aldehyde dehydrogenase, cytosolic 1 OS=Mus musculu... [more]
ALDH2_RAT1.874e-2250.53Aldehyde dehydrogenase, mitochondrial OS=Rattus no... [more]
ALDH2_MESAU1.874e-2250.53Aldehyde dehydrogenase, mitochondrial OS=Mesocrice... [more]
AL1A7_RAT1.874e-2248.42Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norv... [more]
ALDH2_HORSE2.447e-2250.53Aldehyde dehydrogenase, mitochondrial OS=Equus cab... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001A15_f Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001A15, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN181497 ID=CN181497; Name=CN181497; organism=Citrus sinensis; type=EST; length=317bp
CCTTTTCTCAAAAAAAATGGGAGCCATTTTGGACTTGACCTGCAGATAGT
GATGTAGAGATTTTTTTCCACAGTCTCGACCAAATCCACTCATCTTGTAT
CCTCCGTAAGGGCAGTCGCTGTCAAAAGCAAAATAACAATTGATCCATAT
AATTTTTTTTCGAATTGATCTAGAGACGGTATTAGCCACATTCAAGTCCT
TTGTCATAATGCCTGCTGCTAGGCCATTTTTTTTATTATTTGCACTCTTA
ATTGTTTTTTCGGCAAAAAAAAATTTCATCAATGCCATCACAGGTCCGAA
AATTTCATTCTTTGCTA
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