CN181488
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN181488 vs. ExPASy Swiss-Prot
Match: GSL_ARATH (Probable 2-oxoacid dependent dioxygenase OS=Arabidopsis thaliana GN=GSL-OH PE=2 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.425e-30 Identity = 66/180 (36.67%), Postives = 107/180 (59.44%), Query Frame = 1 Query: 64 ESYDRAKPLKRSDDSXXXXXXXXXXXXTAIPRFYIHPPATLADLRPKSKTRPVSDVVPTIDLSGV-DSDDLRPTIVEKIACASRELGFFQVVNHGIGVEVLERMVRAIKGFHEQPPDIKAPVYRRENTKGVSYISNIDLFHSKAASWRDTLQIRLGLTEPELEEVPEICRKEAVEWNHHV 600 E+YDRA LK D+ T +PR + +P +A+ +P S ++PTIDL GV +S +R ++V K+ A + GFFQ +NHG+ ++V+E+M+ I+ FH+Q P+++ Y R+ TK + Y SN DL+ S AASWRDTL + P+ +++PE+C + +E++ V Sbjct: 3 ENYDRASELKAFDEMKIGVKGLVDAGVTKVPRIFHNPHVNVANPKPTSTVV----MIPTIDLGGVFESTVVRESVVAKVKDAMEKFGFFQAINHGVPLDVMEKMINGIRRFHDQDPEVRKMFYTRDKTKKLKYHSNADLYESPAASWRDTLSCVMAPDVPKAQDLPEVCGEIMLEYSKEV 178
BLAST of CN181488 vs. ExPASy Swiss-Prot
Match: ACCH2_ARATH (1-aminocyclopropane-1-carboxylate oxidase homolog 2 OS=Arabidopsis thaliana GN=At1g06640 PE=2 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 1.742e-28 Identity = 65/180 (36.11%), Postives = 100/180 (55.56%), Query Frame = 1 Query: 67 SYDRAKPLKRSDDSXXXXXXXXXXXXTAIPRFYIHPPATLADLRPKSKTRPVSDVVPTIDLSGVDSDDL--RPTIVEKIACASRELGFFQVVNHGIGVEVLERMVRAIKGFHEQPPDIKAPVYRRENTKGVSYISNIDLFHSKAASWRDTLQIRLGLTEPELEEVPEICRKEAVEWNHHV 600 S+DRA LK D++ + IPR + H LA+ +P +PTIDL G D D +E I A+ + GFFQV+NHG+ +E+LE+M ++ FHEQPP+++ +Y R+ + Y+SN DL+ + AA+WRDT + PE +++PEICR +E++ V Sbjct: 9 SFDRASELKAFDETKTGVKGLVDSGISKIPRIFHHSSVELANPKPLPSDLLHLKTIPTIDLGGRDFQDAIKHKNAIEGIKEAAAKWGFFQVINHGVSLELLEKMKDGVRDFHEQPPEVRKDLYSRDFGRKFIYLSNFDLYTAAAANWRDTFYCYMAPDPPEPQDLPEICRDVMMEYSKQV 188
BLAST of CN181488 vs. ExPASy Swiss-Prot
Match: ACCH3_ARATH (1-aminocyclopropane-1-carboxylate oxidase homolog 4 OS=Arabidopsis thaliana GN=At1g06650 PE=2 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 2.971e-28 Identity = 63/179 (35.20%), Postives = 100/179 (55.87%), Query Frame = 1 Query: 70 YDRAKPLKRSDDSXXXXXXXXXXXXTAIPRFYIHPPATLADLRPKSKTRPVSDVVPTIDLSGVDSDDL--RPTIVEKIACASRELGFFQVVNHGIGVEVLERMVRAIKGFHEQPPDIKAPVYRRENTKGVSYISNIDLFHSKAASWRDTLQIRLGLTEPELEEVPEICRKEAVEWNHHV 600 +DRA LK D++ + +PR + HP L+ +P +PTIDL G D D R +E+I A+ + GFFQV+NHG+ +E+LE+M + ++ FHEQ +++ Y R+ ++ Y+SN DLF S AA+WRDT + P+ +++PEICR +E++ V Sbjct: 10 FDRASELKAFDETKTGVKGLVDSGVSQVPRIFHHPTVKLSTPKPLPSDLLHLKTIPTIDLGGRDFQDAIKRNNAIEEIKEAAAKWGFFQVINHGVSLELLEKMKKGVRDFHEQSQEVRKEFYSRDFSRRFLYLSNFDLFSSPAANWRDTFSCTMAPDTPKPQDLPEICRDIMMEYSKQV 188
BLAST of CN181488 vs. ExPASy Swiss-Prot
Match: ACCH1_ARATH (1-aminocyclopropane-1-carboxylate oxidase homolog 1 OS=Arabidopsis thaliana GN=At1g06620 PE=2 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 6.618e-28 Identity = 69/186 (37.10%), Postives = 104/186 (55.91%), Query Frame = 1 Query: 46 ATIMSLESYDRAKPLKRSDDSXXXXXXXXXXXXTAIPRFYIHPPATLADLRPKSKTRPVSDVVPTIDLSGVDSDDL-RPTIVEKIACASRELGFFQVVNHGIGVEVLERMVRAIKGFHEQPPDIKAPVYRRENTKGVSYISNIDLFHSKAASWRDTLQIRLGLTEPELEEVPEICRKEAVEWNHHV 600 +++ + + DR+ LK D++ T IP + PPATL +P S + +PTIDL G +D + R ++VEKI A+ + GFFQV+NHGI ++VLE+M+ I+ FHEQ ++K Y R+ + Y SN DLF S AA+WRDTL P E++P C + +E++ V Sbjct: 3 SSLPQVAALDRSTLLKAFDETKTGVKGLIDAGITEIPSIFRAPPATLTSPKPPSSS---DFSIPTIDLKGGGTDSITRRSLVEKIGDAAEKWGFFQVINHGIPMDVLEKMIDGIREFHEQDTEVKKGFYSRDPASKMVYSSNFDLFSSPAANWRDTLGCYTAPDPPRPEDLPATCGEMMIEYSKEV 185
BLAST of CN181488 vs. ExPASy Swiss-Prot
Match: ACCH3_SOLLC (1-aminocyclopropane-1-carboxylate oxidase homolog OS=Solanum lycopersicum GN=ACO3 PE=2 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 9.556e-27 Identity = 67/184 (36.41%), Postives = 100/184 (54.35%), Query Frame = 1 Query: 64 ESYDRAKPLKRSDDSXXXXXXXXXXXXTAIPRFYIHPPATLADLRPKSKTRPVSDVVPTIDLSGVDSDDLR-PTIVEKIACASRELGFFQVVNHGIGVEVLERMVRAIKGFHEQPPDIKAPVYRRENTKGVSYISNIDLFHSK--AASWRDTLQIRLGLTEPELEEVPEICRKEAVEWNHHVKQ 606 ESYD+ LK DD+ T +P+ ++ PP + ++K V P IDL G+D D ++ IV+K+ AS + GFFQVVNHGI VL+R ++ + F EQ ++K Y R+ K V Y SN+DL+ S AASWRDT+ + P L+E P C + ++++ VK+ Sbjct: 8 ESYDKMSELKAFDDTKAGVKGLVDSGITKVPQIFVLPP------KDRAKKCETHFVFPVIDLQGIDEDPIKHKEIVDKVRDASEKWGFFQVVNHGIPTSVLDRTLQGTRQFFEQDNEVKKQYYTRDTAKKVVYTSNLDLYKSSVPAASWRDTIFCYMAPNPPSLQEFPTPCGESLIDFSKDVKK 185
BLAST of CN181488 vs. ExPASy Swiss-Prot
Match: DV4H_CATRO (Deacetoxyvindoline 4-hydroxylase OS=Catharanthus roseus GN=D4H PE=1 SV=2) HSP 1 Score: 110.538 bits (275), Expect = 7.572e-24 Identity = 64/185 (34.59%), Postives = 104/185 (56.22%), Query Frame = 1 Query: 58 SLESYDRAKPLKRSDDSXXXXXXXXXXXXTAIPRFYIHPPATLADLRPKSKTRPVSDV-VPTIDLSGVDSD-DLRPTIVEKIACASRELGFFQVVNHGIGVEVLERMVRAIKGFHEQPPDIKAPVYRREN-TKGVSYISNIDLFHSKAASWRDTLQIRLGLTEPELEEVPEICRKEAVEWNHHVK 603 +L + + LK D++ T IPR +I P L + S R SD+ +P I+L+G+ S+ ++R IVEKI AS + GFFQ+VNHGI +V+++MV ++ FHEQ IK Y R+ K Y SN L A +WRDT++ + +P+ +E P++CR ++++++V+ Sbjct: 35 TLSEEESLRELKAFDETKAGVKGIVDTGITKIPRIFIDQPKNLDRI---SVCRGKSDIKIPVINLNGLSSNSEIRREIVEKIGEASEKYGFFQIVNHGIPQDVMDKMVDGVRKFHEQDDQIKRQYYSRDRFNKNFLYSSNYVLIPGIACNWRDTMECIMNSNQPDPQEFPDVCRDILMKYSNYVR 216 The following BLAST results are available for this feature:
BLAST of CN181488 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CN181488 ID=CN181488; Name=CN181488; organism=Citrus sinensis; type=EST; length=649bpback to top |