CN188577

Overview
NameCN188577
Unique NameCN188577
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length836
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CN188577_ssr637 microsatellite CN188577_ssr637:637..648. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig209 contig Csv1_Contig209:96..931. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN188577 vs. ExPASy Swiss-Prot
Match: CIPK5_ARATH (CBL-interacting serine/threonine-protein kinase 5 OS=Arabidopsis thaliana GN=CIPK5 PE=1 SV=1)

HSP 1 Score: 250.366 bits (638), Expect = 9.476e-66
Identity = 129/229 (56.33%), Postives = 156/229 (68.12%), Query Frame = -2
Query:  149 NMYRKVFKAEFVYPPWISTDAKRLISKLLVSDPERRITIQSIMRVPWFRKGFTRPVAFSITQHXXXXXXDQAATEKTENDRHNNQEEKVSSPKFFNAFEFISSMSSGFDLSNLFENKKKTGSMFTSRYSARHIMEKIEGVAKGMNFKVAKVKDFKIRLRGDSEGRKGPLSXXXXXXXXXXXXXXXEFSKSSGDTLEYAKFCEEDVRPALKDIVWTWQGDNINKVEGEDC 835
            NMYRK+F+A+F +PPW S +A+RLISKLLV DP+RRI+I +IMR PW RK FT P+AF I +            E+ + D  N  E    SPKFFNAFEFISSMSSGFDLS+LFE+K+K  S+FTSR SA  +MEKIE V K MN KV + KDFK+++ G +EGRKG LS               EF KS+GDTLEY +  EE+VRPAL DIVW+W GDN N    EDC
Sbjct:  220 NMYRKIFRADFEFPPWFSPEARRLISKLLVVDPDRRISIPAIMRTPWLRKNFTPPLAFKIDEPICSQSSKNNEEEEEDGDCENQTEP--ISPKFFNAFEFISSMSSGFDLSSLFESKRKVQSVFTSRSSATEVMEKIETVTKEMNMKVKRTKDFKVKMEGKTEGRKGRLSMTAEVFEVAPEISVVEFCKSAGDTLEYDRLYEEEVRPALNDIVWSWHGDN-NNTSSEDC 445          
BLAST of CN188577 vs. ExPASy Swiss-Prot
Match: CIPKP_ARATH (CBL-interacting serine/threonine-protein kinase 25 OS=Arabidopsis thaliana GN=CIPK25 PE=2 SV=1)

HSP 1 Score: 229.565 bits (584), Expect = 1.731e-59
Identity = 119/221 (53.85%), Postives = 146/221 (66.06%), Query Frame = -2
Query:  170 MYRKVFKAEFVYPPWISTDAKRLISKLLVSDPERRITIQSIMRVPWFRKGFTRPVAFSITQHXXXXXXDQAATEKTENDRHNNQEEKVSSPKFFNAFEFISSMSSGFDLSNLFENKKKTGSMFTSRYSARHIMEKIEGVAKGMNFKVAKVKDFKIRLRGDSEGRKGPLSXXXXXXXXXXXXXXXEFSKSSGDTLEYAKFCEEDVRPALKDIVWTWQGDNIN 832
            MYRK+FK+EF YPPW S ++KRLISKLLV DP +RI+I +IMR PWFRK    P+ F I +       D+  T                SPKFFNAFEFISSMSSGFDLS+LFE+K+K  SMFTSR+SA  IM K+EG+ K MN KV + KDFK++L G +EGRKG ++               E  KS+GDTLEY +  EE VRPAL++IVW+W GDN N
Sbjct:  251 MYRKIFKSEFEYPPWFSPESKRLISKLLVVDPNKRISIPAIMRTPWFRKNINSPIEFKIDELEIQNVEDETPTTTATTATTTTTPV---SPKFFNAFEFISSMSSGFDLSSLFESKRKLRSMFTSRWSASEIMGKLEGIGKEMNMKVKRTKDFKVKLFGKTEGRKGQIAVTAEVFEVAPEVAVVELCKSAGDTLEYNRLYEEHVRPALEEIVWSWHGDNHN 468          
BLAST of CN188577 vs. ExPASy Swiss-Prot
Match: CIPKG_ARATH (CBL-interacting serine/threonine-protein kinase 16 OS=Arabidopsis thaliana GN=CIPK16 PE=1 SV=1)

HSP 1 Score: 219.164 bits (557), Expect = 2.339e-56
Identity = 112/219 (51.14%), Postives = 151/219 (68.95%), Query Frame = -2
Query:  176 MYRKVFKAEFVYPPWISTDAKRLISKLLVSDPERRITIQSIMRVPWFRKGFTRPVAFSITQHXXXXXXDQAATEKTENDRHNNQEEKVSSPKFFNAFEFISSMSSGFDLSNLFENKKKTGSMFTSRYSARHIMEKIEGVAKGMNFKVAKVKDFKIRLRGDSEGRKGPLSXXXXXXXXXXXXXXXEFSKSSGDTLEYAKFCEEDVRPALKDIVWTWQGDN 832
            +Y K+FKAE  +PPW S ++K L+S+LLV DPE+RI++  I  +PWFRK FT  VAFSI +        +  T+K + D  N +E+  +SP+ FNAF+FI+SMSSGFDLSNLFE K+K   MFTS++ A+ + E++E  A+ M+ +V  VKD K++L+  +EGRKG LS               EF K+SGDTLEY  FCE+DVRPALKDIVW+WQGD+
Sbjct:  232 LYTKIFKAECEFPPWFSLESKELLSRLLVPDPEQRISMSEIKMIPWFRKNFTPSVAFSIDE--TIPSPPEPPTKKKKKDL-NEKEDDGASPRSFNAFQFITSMSSGFDLSNLFEIKRKPKRMFTSKFPAKSVKERLETAAREMDMRVKHVKDCKMKLQRRTEGRKGRLSVTAEVFEVAPEVSVVEFCKTSGDTLEYYLFCEDDVRPALKDIVWSWQGDD 447          
BLAST of CN188577 vs. ExPASy Swiss-Prot
Match: CIPKG_ORYSJ (CBL-interacting protein kinase 16 OS=Oryza sativa subsp. japonica GN=CIPK16 PE=2 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 1.858e-45
Identity = 95/220 (43.18%), Postives = 132/220 (60.00%), Query Frame = -2
Query:  179 MYRKVFKAEFVYPPWISTDAKRLISKLLVSDPERRITIQSIMRVPWFRKGFTRPVAFSITQHXXXXXXDQAATEKTEND--RHNNQEEKVSSPKFFNAFEFISSMSSGFDLSNLFENKKKTGSMFTSRYSARHIMEKIEGVAKGMNFKVAKVKDFKIRLRGDSEGRKGPLSXXXXXXXXXXXXXXXEFSKSSGDTLEYAKFCEEDVRPALKDIVWTWQGD 832
            MY+K+FKAE+  PPW+S DA+RLI +LLV DP +RI+I  IMR PWF+KGF  PV  S             + +K E D    +  +    SP+  NAF+ ISSMSSGFDLS +FE+++K  ++FTSR  A  +++K+E V + + +   + K +K+RL   ++G  G L+               EF+  +GD LE+ KFC  DVRP L DIVW WQGD
Sbjct:  231 MYQKIFKAEYQVPPWVSGDARRLIVRLLVVDPAKRISIPEIMRTPWFKKGFVPPVPTS-----------PVSPKKWEEDDVLLDGGDSGAMSPRTCNAFQLISSMSSGFDLSGMFESEQKAATVFTSRAPAATVIQKLEAVGRSLGYSATRGKGWKLRLEATADGANGRLAVTVEALEVAADVAVVEFAHDAGDELEFNKFCAVDVRPGLADIVWAWQGD 439          
BLAST of CN188577 vs. ExPASy Swiss-Prot
Match: CIPK5_ORYSJ (CBL-interacting protein kinase 5 OS=Oryza sativa subsp. japonica GN=CIPK5 PE=2 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 4.587e-36
Identity = 87/223 (39.01%), Postives = 123/223 (55.16%), Query Frame = -2
Query:  176 MYRKVFKAEFVYPPWISTDAKRLISKLLVSDPERRITIQSIMRVPWFRKGFTRPVAFSITQHXXXXXXDQAATEKTENDRHNNQEEKVSS--PKFFNAFEFISSMSSGFDLSNLFENKK--KTGSMFTSRYSARHIMEKIEGVAKGMNFKVAKVKDFKIRLRGDSEGRKGPLSXXXXXXXXXXXXXXXEFSKSSGDTLEYAKFCEEDVRPALKDIVWTWQGDN 832
            MYRK+ K +  +P W +TD +RL+S+LL  +P  RIT++ ++  PWF+KG+   V  S             A      D     +E  SS  P   NAF+ I S+S GFDLS LFEN K  K  S F ++  A  I+ K+E +A+  +FKV K +D  ++L+G  EGRKG L+               E  KS+GDTLEY KFC + +RP+L+DI W  Q ++
Sbjct:  220 MYRKISKGDVKFPQWFTTDVRRLLSRLLDPNPNIRITVEKLVEHPWFKKGYKPAVMLSQPNESNNLKDVHTAFSADHKDNEGKAKEPASSLKPVSLNAFDII-SLSKGFDLSGLFENDKEQKADSRFMTQKPASAIVSKLEQIAETESFKVKK-QDGLVKLQGSKEGRKGQLAIDAEIFEVTPSFFVVEVKKSAGDTLEYEKFCNKGLRPSLRDICWDGQSEH 440          
BLAST of CN188577 vs. ExPASy Swiss-Prot
Match: CIPK2_ORYSJ (CBL-interacting protein kinase 2 OS=Oryza sativa subsp. japonica GN=CIPK2 PE=2 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 4.587e-36
Identity = 83/229 (36.24%), Postives = 120/229 (52.40%), Query Frame = -2
Query:  149 NMYRKVFKAEFVYPPWISTDAKRLISKLLVSDPERRITIQSIMRVPWFRKGFTRPVAFSITQHXXXXXXDQAATEKTENDRHNNQEEKVSSPKFFNAFEFISSMSSGFDLSNLFENKKKTGSMFTSRYSARHIMEKIEGVAKGMNFKVAKVKDFKIRLRGDSEGRKGPLSXXXXXXXXXXXXXXXEFSKSSGDTLEYAKFCEEDVRPALKDIVWTWQGDNINKVEGEDC 835
            +MY+K+ KAEF  P W +TD +RL+ ++L  +P  RI++  IM  PWFRKG        + ++             T+ D  N+       P   NAF+ I S+S+G DLS +FE   K  S FTS  +A  I+ KIE +AKG+  K+ K     +++ G   GRKG +                E  K++GDTLEY K   +++RPALKDIVW WQG+   + +   C
Sbjct:  220 DMYKKIGKAEFKCPSWFNTDVRRLLLRILDPNPSTRISMDKIMENPWFRKGLDA----KLLRYNLQPKDAIPVDMSTDFDSFNSAPTLEKKPSNLNAFDII-SLSTGLDLSGMFEESDKKESKFTSTSTASTIISKIEDIAKGLRLKLTKKDGGLLKMEGSKPGRKGVMGIDAEIFEVTPNFHLVELKKTNGDTLEYRKVLNQEMRPALKDIVWAWQGEQPKQQQQPTC 443          
BLAST of CN188577 vs. ExPASy Swiss-Prot
Match: CIPKK_ARATH (CBL-interacting serine/threonine-protein kinase 20 OS=Arabidopsis thaliana GN=CIPK20 PE=1 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 3.883e-35
Identity = 86/223 (38.57%), Postives = 122/223 (54.71%), Query Frame = -2
Query:  170 MYRKVFKAEFVYPPWISTDAKRLISKLLVSDPERRITIQSIMRVPWFRKGFTR-PVAFSITQHXXXXXXDQAATEKTENDRHNNQEEKVSSPKFFNAFEFISSMSSGFDLSNLFENKKKTGSMFTSRYSARHIMEKIEGVA-KGMNFKVAKVKDFKIRLRGDSEGRKGPLSXXXXXXXXXXXXXXXEFSKSSGDTLEYAKFCEEDVRPALKDIVWTWQGDNIN 832
            MYRK+ K EF  P W   + K+L+S++L  +P  RI I+ IM   WF+KGF +     S   H           +   +D H     K   P  +NAF+ ISS+S GFDLS LFE ++++ S FT++  A+ I+ K E +A     F + K  D  +++    EGRKG L+               EF KS GDT+EY +FC+ ++RP+LKDIVW WQG+N N
Sbjct:  220 MYRKITKGEFKCPNWFPPEVKKLLSRILDPNPNSRIKIEKIMENSWFQKGFKKIETPKSPESH---------QIDSLISDVHAAFSVK---PMSYNAFDLISSLSQGFDLSGLFEKEERSESKFTTKKDAKEIVSKFEEIATSSERFNLTK-SDVGVKMEDKREGRKGHLAIDVEIFEVTNSFHMVEFKKSGGDTMEYKQFCDRELRPSLKDIVWKWQGNNNN 429          
BLAST of CN188577 vs. ExPASy Swiss-Prot
Match: CIPKA_ORYSJ (CBL-interacting protein kinase 10 OS=Oryza sativa subsp. japonica GN=CIPK10 PE=2 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 2.783e-33
Identity = 84/223 (37.67%), Postives = 121/223 (54.26%), Query Frame = -2
Query:  179 NMYRKVFKAEFVYPPWISTDAKRLISKLLVSDPERRITIQSIMRVPWFRKGFTRPVAFSITQHXXXXXXDQAATEKTENDRHNNQEE---KVSSPKFFNAFEFISSMSSGFDLSNLFENK-KKTGSMFTSRYSARHIMEKIEGVAKGMNFKVAKVKDFKIRLRGDSEGRKGPLSXXXXXXXXXXXXXXXEFSKSSGDTLEYAKFCEEDVRPALKDIVWTWQGD 835
            NMY+K+ KAEF +P W S+D ++L+ ++L  +P  RI++  IM  PWFR G    +                  + T  +  NN  E   +  +    NAF+ I S+SSGFDLS +FE++  K  S FTS  +A  I +K+E VAK +  K  K     +++ G   GRKG +S               EF+K +GDTLEY K  ++++RPALKDIVW WQG+
Sbjct:  220 NMYKKICKAEFKWPSWFSSDIRKLLRRILDPNPATRISVSEIMEDPWFRVGLNSDLLNKTIPTDKVDKVVHVDMDSTFGNLSNNINEGKQEAENLTSLNAFDII-SLSSGFDLSAMFEDENSKEESKFTSTNTATTITKKLEDVAKNLRLKFLKKNGGLLKMEGSKPGRKGVMSINAEIFQITPDFHLVEFTKINGDTLEYQK-VKQEMRPALKDIVWAWQGE 440          
BLAST of CN188577 vs. ExPASy Swiss-Prot
Match: CIPKI_ORYSJ (CBL-interacting protein kinase 18 OS=Oryza sativa subsp. japonica GN=CIPK18 PE=2 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 1.804e-32
Identity = 86/230 (37.39%), Postives = 120/230 (52.17%), Query Frame = -2
Query:  179 MYRKVFKAEFVYPPWISTDAKRLISKLLVSDPERRITIQSIMRVPWFRKGF-----------TRPVAFSITQHXXXXXXDQAATEKTENDRHNNQEEKVSSPKFFNAFEFISSMSSGFDLSNLF-ENKKKTGSMFTSRYSARHIMEKIEGVAKGMNFKVAKVKDFKIRLRGDSEGRKGPLSXXXXXXXXXXXXXXXEFSKSSGDTLEYAKFCEEDVRPALKDIVWTWQGD 832
            MYRK+ KAEF  P W S+D ++L+S++L  +P  R+ I  IM   WF+KG              PV      +        ++++KTE      +++        NAF+ I S+S GFDLS LF E  KK  + FTS  SA  I+ K+E VA      V K +   +++ G SEGRKG L+               E  K++GDTLEY    +ED++PALKDIVW WQG+
Sbjct:  223 MYRKIGKAEFKCPAWFSSDVRKLVSRILDPNPRSRMPITKIMETYWFKKGLDSKLILKNVETNEPVTALADVNVVFSSMGSSSSKKTE------EKQDAGKLTNLNAFDII-SLSEGFDLSGLFEETDKKKEARFTSSQSASAIISKLEDVASCSKLTVKKKEGGVLKMEGASEGRKGVLAIDAEIFEVTPSFHLVEIKKNNGDTLEYQHLWKEDMKPALKDIVWAWQGE 445          
BLAST of CN188577 vs. ExPASy Swiss-Prot
Match: CIPKA_ARATH (CBL-interacting serine/threonine-protein kinase 10 OS=Arabidopsis thaliana GN=CIPK10 PE=1 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 8.952e-32
Identity = 88/246 (35.77%), Postives = 119/246 (48.37%), Query Frame = -2
Query:  140 MYRKVFKAEFVYPPWISTDAKRLISKLLVSDPERRITIQSIMRVPWFRKGFTRPVAFSITQHXXXXXXDQAATEKT---------------ENDRHNNQEEKVSSPKFFNAFEFISSMSSGFDLSNLFENKKKTGSMFTSRYSARHIMEKIEGVAKGMNFKVAKVKDFKIRLRGDSEGRKGPLSXXXXXXXXXXXXXXXEFSKSSGDTLEYAKFCEEDVRPALKDIVWTWQGDNINKVEGEDCEMQ 832
            MYRK+ KA+F  P W + + +RL+ K+L  +PE RITI  I    WFRKG        + +        +A T  T               EN     +E     P   NAF+ I ++S+GFDL+ LF +  K  S FTS+  A  I+ K+E VA+ +   + K +    +L    EGRKG LS               E  KS+GDTLEY K   ED+RPAL DIVW WQG+       ++ E Q
Sbjct:  220 MYRKIGKADFKAPSWFAPEVRRLLCKMLDPNPETRITIARIRESSWFRKGLHMKQK-KMEKRVKEINSVEAGTAGTNENGAGPSENGAGPSENGDRVTEENHTDEPTNLNAFDLI-ALSAGFDLAGLFGDDNKRESRFTSQKPASVIISKLEEVAQRLKLSIRKREAGLFKLERLKEGRKGILSMDAEIFQVTPNFHLVEVKKSNGDTLEYQKLVAEDLRPALSDIVWVWQGEKDELTSQQETEYQ 463          
The following BLAST results are available for this feature:
BLAST of CN188577 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 51
Match NameE-valueIdentityDescription
CIPK5_ARATH9.476e-6656.33CBL-interacting serine/threonine-protein kinase 5 ... [more]
CIPKP_ARATH1.731e-5953.85CBL-interacting serine/threonine-protein kinase 25... [more]
CIPKG_ARATH2.339e-5651.14CBL-interacting serine/threonine-protein kinase 16... [more]
CIPKG_ORYSJ1.858e-4543.18CBL-interacting protein kinase 16 OS=Oryza sativa ... [more]
CIPK5_ORYSJ4.587e-3639.01CBL-interacting protein kinase 5 OS=Oryza sativa s... [more]
CIPK2_ORYSJ4.587e-3636.24CBL-interacting protein kinase 2 OS=Oryza sativa s... [more]
CIPKK_ARATH3.883e-3538.57CBL-interacting serine/threonine-protein kinase 20... [more]
CIPKA_ORYSJ2.783e-3337.67CBL-interacting protein kinase 10 OS=Oryza sativa ... [more]
CIPKI_ORYSJ1.804e-3237.39CBL-interacting protein kinase 18 OS=Oryza sativa ... [more]
CIPKA_ARATH8.952e-3235.77CBL-interacting serine/threonine-protein kinase 10... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0006F12_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0006F12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188577 ID=CN188577; Name=CN188577; organism=Citrus sinensis; type=EST; length=836bp
TAGTAGCCAACCCAAATATAGTATTTACATGTGTTCCGAAACCATTAAAC
CAAAAAACAAAATGTCAAAAATTTGCAAGTAAAATTAAAACCCTGGCCTG
TAGTTAAAATTAATTTAGTTGGTAGGCAGCATTTGAGAGTTGCATTTCAC
AATCTTCACCCTCGACTTTGTTAATATTGTCACCTTGCCATGTCCAGACG
ATGTCTTTCAATGCAGGCCTAACATCTTCTTCGCAAAACTTTGCATACTC
CAAGGTATCACCGGACGACTTCGAAAACTCGACGACCGCCACCTCCGGCG
CCACCTCGAACACCTCCGCAATCACCGACAGGGGCCCTTTTCGCCCCTCG
GAATCCCCGCGTAACCTAATTTTAAAATCCTTGACTTTTGCCACCTTAAA
GTTCATCCCCTTGGCAACCCCCTCAATCTTTTCCATTATATGCCTGGCCG
AATACCTTGACGTGAACATGGACCCCGTTTTCTTCTTGTTCTCAAACAAA
TTGGACAAATCGAACCCCGACGACATGGATGAGATGAACTCAAACGCGTT
AAAAAACTTGGGAGACGATACTTTCTCTTCCTGATTATTATGACGATCGT
TCTCCGTTTTTTCTGTCGCCGCTTGATCGTCGTCGCCATCATCATCATGT
TGAGTAATGGAAAACGCGACGGGTCTAGTGAACCCTTTGCGGAACCAAGG
GACGCGCATGATGGATTGAATGGTGATTCGCCTCTCGGGATCGGAGACGA
GAAGCTTGGAAATCAAACGCTTGGCATCCGTGGAAATCCAAGGAGGATAA
ACGAACTCAGCCTTGAAAACTTTCCTATACATGTTC
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