CN188552

Overview
NameCN188552
Unique NameCN188552
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length870
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN188552 vs. ExPASy Swiss-Prot
Match: ACA13_ARATH (Putative calcium-transporting ATPase 13, plasma membrane-type OS=Arabidopsis thaliana GN=ACA13 PE=2 SV=1)

HSP 1 Score: 382.489 bits (981), Expect = 1.689e-105
Identity = 182/233 (78.11%), Postives = 209/233 (89.70%), Query Frame = -2
Query:  171 EVAKESSDIVIMDDNFTSVVTVLRWGRCVYNNIQKFLQFQLTVNVAALVINFVAAVSSGKVPLTAVQLLWVNLIMDTLGALALATEQPTNDLMSKPPVGRSEPLITKLMWRNLIPQAIYQVTILLTLQFKGRSIFSVNESVKDTMIFNTFVFCQIFNEFNARKLEKKNIFKGIHKNKLFLAIIGITIVLQLIMVEFLKKFADTERLNWGQWAACIGIAAMSWPIGFLFKCIPV 869
            EVAKESSDIVI+DDNF SV TVL+WGRCVYNNIQKF+QFQLTVNVAALVINFVAAVS+G VPLTAVQLLWVNLIMDTLGALALATE+PTNDLM K P+GR  PLIT +MWRNL+ QA YQ+++LL LQF+GRSIF+V E VK+T+IFNTFV CQ+FNEFNAR LEKKN+FKG+HKN+LF+ II +T+VLQ++MVEFLK+FADTERLN GQW  CI IAA SWPIG+L K +PV
Sbjct:  770 EVAKESSDIVILDDNFASVATVLKWGRCVYNNIQKFIQFQLTVNVAALVINFVAAVSAGDVPLTAVQLLWVNLIMDTLGALALATEKPTNDLMKKKPIGRVAPLITNIMWRNLLAQAFYQISVLLVLQFRGRSIFNVTEKVKNTLIFNTFVLCQVFNEFNARSLEKKNVFKGLHKNRLFIGIIVVTVVLQVVMVEFLKRFADTERLNLGQWGVCIAIAAASWPIGWLVKSVPV 1002          
BLAST of CN188552 vs. ExPASy Swiss-Prot
Match: ACA12_ARATH (Putative calcium-transporting ATPase 12, plasma membrane-type OS=Arabidopsis thaliana GN=ACA12 PE=2 SV=1)

HSP 1 Score: 377.096 bits (967), Expect = 7.094e-104
Identity = 180/239 (75.31%), Postives = 212/239 (88.70%), Query Frame = -2
Query:  153 EVAKESSDIVIMDDNFTSVVTVLRWGRCVYNNIQKFLQFQLTVNVAALVINFVAAVSSGKVPLTAVQLLWVNLIMDTLGALALATEQPTNDLMSKPPVGRSEPLITKLMWRNLIPQAIYQVTILLTLQFKGRSIFSVNESVKDTMIFNTFVFCQIFNEFNARKLEKKNIFKGIHKNKLFLAIIGITIVLQLIMVEFLKKFADTERLNWGQWAACIGIAAMSWPIGFLFKCIPVSGTQLL 869
            EVAKESSDIVI+DDNF SV TVL+WGRCVYNNIQKF+QFQLTVNVAALVINF+AA+S+G+VPLTAVQLLWVNLIMDTLGALALATE+PTN+L+ + PVGR+E LIT +MWRNL+ Q++YQ+ +LL LQFKG SIFSV + VKDT+IFNTFV CQ+FNEFNAR++EKKN+FKG+H+N+LF+ II ITIVLQ+IMVEFLKKFADT RLN  QW  CI +A++SWPIGF  K IPVS T  L
Sbjct:  774 EVAKESSDIVILDDNFASVATVLKWGRCVYNNIQKFIQFQLTVNVAALVINFIAAISAGEVPLTAVQLLWVNLIMDTLGALALATERPTNELLKRKPVGRTEALITNVMWRNLLVQSLYQIAVLLILQFKGMSIFSVRKEVKDTLIFNTFVLCQVFNEFNAREMEKKNVFKGLHRNRLFIGIIAITIVLQVIMVEFLKKFADTVRLNGWQWGTCIALASLSWPIGFFTKFIPVSETPFL 1012          
BLAST of CN188552 vs. ExPASy Swiss-Prot
Match: ACA8_ARATH (Calcium-transporting ATPase 8, plasma membrane-type OS=Arabidopsis thaliana GN=ACA8 PE=1 SV=1)

HSP 1 Score: 333.954 bits (855), Expect = 6.888e-91
Identity = 167/240 (69.58%), Postives = 195/240 (81.25%), Query Frame = -2
Query:  171 EVAKESSDIVIMDDNFTSVVTVLRWGRCVYNNIQKFLQFQLTVNVAALVINFVAAVSSGKVPLTAVQLLWVNLIMDTLGALALATEQPTNDLMSKPPVGRSEPLITKLMWRNLIPQAIYQVTILLTLQFKGRSIFSVNES-------VKDTMIFNTFVFCQIFNEFNARKLEKKNIFKGIHKNKLFLAIIGITIVLQLIMVEFLKKFADTERLNWGQWAACIGIAAMSWPIGFLFKCIPV 869
            EVAKESSDI+I+DDNF SVV V+RWGR VY NIQKF+QFQLTVNVAALVIN VAA+SSG VPLTAVQLLWVNLIMDTLGALALATE PT+ LM +PPVGR EPLIT +MWRNL+ QAIYQV++LLTL F+G SI  +          VK+T+IFN FV CQ FNEFNARK ++KNIFKG+ KN+LF+ II IT+VLQ+I+VEFL KFA T +LNW QW  C+GI  +SWP+  + K IPV
Sbjct:  808 EVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINVVAAISSGDVPLTAVQLLWVNLIMDTLGALALATEPPTDHLMGRPPVGRKEPLITNIMWRNLLIQAIYQVSVLLTLNFRGISILGLEHEVHEHATRVKNTIIFNAFVLCQAFNEFNARKPDEKNIFKGVIKNRLFMGIIVITLVLQVIIVEFLGKFASTTKLNWKQWLICVGIGVISWPLALVGKFIPV 1047          
BLAST of CN188552 vs. ExPASy Swiss-Prot
Match: ACA10_ARATH (Calcium-transporting ATPase 10, plasma membrane-type OS=Arabidopsis thaliana GN=ACA10 PE=1 SV=2)

HSP 1 Score: 319.701 bits (818), Expect = 1.344e-86
Identity = 160/241 (66.39%), Postives = 192/241 (79.67%), Query Frame = -2
Query:  162 EVAKESSDIVIMDDNFTSVVTVLRWGRCVYNNIQKFLQFQLTVNVAALVINFVAAVSSGKVPLTAVQLLWVNLIMDTLGALALATEQPTNDLMSKPPVGRSEPLITKLMWRNLIPQAIYQVTILLTLQFKGRSIFSVN-----ESVKDTMIFNTFVFCQIFNEFNARKLEKKNIFKGIHKNKLFLAIIGITIVLQLIMVEFLKKFADTERLNWGQWAACIGIAAMSWPIGFLFKCIPVSGT 869
            EVAKE SDI+I+DDNF SVV V+RWGR VY NIQKF+QFQLTVNVAALVIN VAA+S+G+VPLTAVQLLWVNLIMDTLGALALATE PT+ LM + PVGR EPLIT +MWRNL  QA+YQVT+LL L F+G SI  +      E VK+T+IFN FV CQ+FNEFNARK ++ NIF+G+ +N LF+ II ITIVLQ+++VEFL  FA T +L+W  W  CIGI ++SWP+  + K IPV  T
Sbjct:  812 EVAKEKSDIIILDDNFESVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINVVAAISAGEVPLTAVQLLWVNLIMDTLGALALATEPPTDHLMDRAPVGRREPLITNIMWRNLFIQAMYQVTVLLILNFRGISILHLKSKPNAERVKNTVIFNAFVICQVFNEFNARKPDEINIFRGVLRNHLFVGIISITIVLQVVIVEFLGTFASTTKLDWEMWLVCIGIGSISWPLAVIGKLIPVPET 1052          
BLAST of CN188552 vs. ExPASy Swiss-Prot
Match: ACA9_ARATH (Calcium-transporting ATPase 9, plasma membrane-type OS=Arabidopsis thaliana GN=ACA9 PE=2 SV=2)

HSP 1 Score: 315.464 bits (807), Expect = 2.535e-85
Identity = 159/245 (64.90%), Postives = 189/245 (77.14%), Query Frame = -2
Query:  156 EVAKESSDIVIMDDNFTSVVTVLRWGRCVYNNIQKFLQFQLTVNVAALVINFVAAVSSGKVPLTAVQLLWVNLIMDTLGALALATEQPTNDLMSKPPVGRSEPLITKLMWRNLIPQAIYQVTILLTLQFKGRSIFSVNE-------SVKDTMIFNTFVFCQIFNEFNARKLEKKNIFKGIHKNKLFLAIIGITIVLQLIMVEFLKKFADTERLNWGQWAACIGIAAMSWPIGFLFKCIPVSGTQL 869
            EVAKESSDI+I+DDNF SVV V+RWGR VY NIQKF+QFQLTVNVAAL+IN VAA+SSG VPL AVQLLWVNLIMDTLGALALATE PT+ LM + PVGR EPLIT +MWRNL+ Q+ YQV +LL L F G SI  +N         VK+TMIFN FV CQIFNEFNARK ++ N+F+G++KN LF+AI+G+T +LQ+I+V FL KFA T RL W  W A I I  +SWP+  + K IPV  T +
Sbjct:  825 EVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALIINVVAAMSSGDVPLKAVQLLWVNLIMDTLGALALATEPPTDHLMHRTPVGRREPLITNIMWRNLLVQSFYQVAVLLVLNFAGLSILGLNHENHAHAVEVKNTMIFNAFVMCQIFNEFNARKPDEMNVFRGVNKNPLFVAIVGVTFILQIIIVTFLGKFAHTVRLGWQLWLASIIIGLVSWPLAIVGKLIPVPKTPM 1069          
BLAST of CN188552 vs. ExPASy Swiss-Prot
Match: ACA5_ORYSJ (Probable calcium-transporting ATPase 5, plasma membrane-type OS=Oryza sativa subsp. japonica GN=Os11g0140400 PE=3 SV=1)

HSP 1 Score: 285.034 bits (728), Expect = 3.669e-76
Identity = 129/237 (54.43%), Postives = 184/237 (77.64%), Query Frame = -2
Query:  171 EVAKESSDIVIMDDNFTSVVTVLRWGRCVYNNIQKFLQFQLTVNVAALVINFVAAVSSGKVPLTAVQLLWVNLIMDTLGALALATEQPTNDLMSKPPVGRSEPLITKLMWRNLIPQAIYQVTILLTLQFKGRSIFSV----NESVKDTMIFNTFVFCQIFNEFNARKLEKKNIFKGIHKNKLFLAIIGITIVLQLIMVEFLKKFADTERLNWGQWAACIGIAAMSWPIGFLFKCIPV 869
            EVAKES+D++++DDNFT+++ V RWGR VY NIQKF+QFQLTVN+ ALVINFV+A  +G  PLTAVQLLWVN+IMDTLGALALATE P +++M +PPV + E  ITK+MWRN++ Q++YQ+ +L  L F G S+ ++    ++S+ +T+IFN+FVFCQ+FNE N+R+++K N+F+GI  N +F+A+I  T+  Q++++EFL  FA T  LNW  W   +G+ ++S  +G + KCIPV
Sbjct:  759 EVAKESADVIVLDDNFTTIINVARWGRAVYINIQKFVQFQLTVNIVALVINFVSACITGSAPLTAVQLLWVNMIMDTLGALALATEPPNDEMMKRPPVRKGESFITKVMWRNIMGQSLYQLFVLGALMFGGESLLNIKGADSKSIINTLIFNSFVFCQVFNEINSREMQKINVFRGIISNWIFIAVIAATVAFQVVIIEFLGTFASTVPLNWQHWLLSVGLGSISLIVGVILKCIPV 995          
BLAST of CN188552 vs. ExPASy Swiss-Prot
Match: ACA4_ORYSJ (Probable calcium-transporting ATPase 4, plasma membrane-type OS=Oryza sativa subsp. japonica GN=Os12g0136900 PE=3 SV=1)

HSP 1 Score: 281.567 bits (719), Expect = 4.057e-75
Identity = 128/237 (54.01%), Postives = 181/237 (76.37%), Query Frame = -2
Query:  171 EVAKESSDIVIMDDNFTSVVTVLRWGRCVYNNIQKFLQFQLTVNVAALVINFVAAVSSGKVPLTAVQLLWVNLIMDTLGALALATEQPTNDLMSKPPVGRSEPLITKLMWRNLIPQAIYQVTILLTLQFKGRSIFSV----NESVKDTMIFNTFVFCQIFNEFNARKLEKKNIFKGIHKNKLFLAIIGITIVLQLIMVEFLKKFADTERLNWGQWAACIGIAAMSWPIGFLFKCIPV 869
            EVAKES+D++++DDNFT+++ V RWGR VY NIQKF+QFQLTVN+ ALVINFV+A   G  PLTAVQLLWVN+IMDTLGALALATE P +++M +PPV + E  ITK MWRN++ Q++YQ+ +L  L F G  + ++    ++S+ +T+IFN+FVFCQ+FNE N+R+++K N+F+GI  N +F+A+I  T+  Q++++EFL  FA T  LNW  W   +G+ ++S  +G + KCIPV
Sbjct:  781 EVAKESADVIVLDDNFTTIINVARWGRAVYINIQKFVQFQLTVNIVALVINFVSACIIGSAPLTAVQLLWVNMIMDTLGALALATEPPNDEMMKRPPVRKGESFITKFMWRNIMGQSLYQLFVLGALMFGGERLLNIKGADSKSIINTLIFNSFVFCQVFNEINSREMQKINVFRGIISNWIFIAVIAATVAFQVVIIEFLGTFASTVPLNWQHWLLSVGLGSISLIVGVILKCIPV 1017          
BLAST of CN188552 vs. ExPASy Swiss-Prot
Match: ACA3_ORYSJ (Calcium-transporting ATPase 3, plasma membrane-type OS=Oryza sativa subsp. japonica GN=Os01g0939100 PE=2 SV=1)

HSP 1 Score: 271.552 bits (693), Expect = 4.198e-72
Identity = 128/237 (54.01%), Postives = 178/237 (75.11%), Query Frame = -2
Query:  171 EVAKESSDIVIMDDNFTSVVTVLRWGRCVYNNIQKFLQFQLTVNVAALVINFVAAVSSGKVPLTAVQLLWVNLIMDTLGALALATEQPTNDLMSKPPVGRSEPLITKLMWRNLIPQAIYQVTILLTLQFKGRSIFSVN----ESVKDTMIFNTFVFCQIFNEFNARKLEKKNIFKGIHKNKLFLAIIGITIVLQLIMVEFLKKFADTERLNWGQWAACIGIAAMSWPIGFLFKCIPV 869
            EVAKE++D++IMDDNF++++ V +WGR VY NIQKF+QFQLTVNV AL++NF++A  +G  PLT VQLLWVNLIMDTLGALALATE P + +M +PPVGR +  ITK+MWRN++ Q+IYQ+ +L  L  +G+S+  +N    +S+ +T +FNTFVFCQ+FNE N+R++EK N+F GI  + +F A++G+T   Q+IMVE L  FA+T  L+   W   + I ++   IG + KCIPV
Sbjct:  784 EVAKENADVIIMDDNFSTIINVAKWGRSVYINIQKFVQFQLTVNVVALMVNFISASFTGSAPLTIVQLLWVNLIMDTLGALALATEPPNDAMMKRPPVGRGDNFITKVMWRNIVGQSIYQLVVLGVLLLRGKSLLQINGPQADSLLNTFVFNTFVFCQVFNEVNSREMEKINVFSGIFSSWIFSAVVGVTAGFQVIMVELLGTFANTVHLSGKLWLTSVLIGSVGLVIGAILKCIPV 1020          
BLAST of CN188552 vs. ExPASy Swiss-Prot
Match: ACA1_ARATH (Calcium-transporting ATPase 1, chloroplastic OS=Arabidopsis thaliana GN=ACA1 PE=1 SV=3)

HSP 1 Score: 271.552 bits (693), Expect = 4.198e-72
Identity = 130/237 (54.85%), Postives = 179/237 (75.53%), Query Frame = -2
Query:  171 EVAKESSDIVIMDDNFTSVVTVLRWGRCVYNNIQKFLQFQLTVNVAALVINFVAAVSSGKVPLTAVQLLWVNLIMDTLGALALATEQPTNDLMSKPPVGRSEPLITKLMWRNLIPQAIYQVTILLTLQFKGRSIFSVNESVKD----TMIFNTFVFCQIFNEFNARKLEKKNIFKGIHKNKLFLAIIGITIVLQLIMVEFLKKFADTERLNWGQWAACIGIAAMSWPIGFLFKCIPV 869
            EVAKES+D++I+DDNF+++VTV +WGR VY NIQKF+QFQLTVNV AL++NF++A  +G  PLTAVQLLWVN+IMDTLGALALATE P +DLM + PVGR    I+ +MWRN++ Q++YQ+ I+  LQ KG+++F ++    D    T+IFN FVFCQ+FNE ++R++EK ++FKGI KN +F+A++  T+V Q+I++E L  FADT  LN GQW   I +  +  P+    K IPV
Sbjct:  781 EVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFLSACLTGNAPLTAVQLLWVNMIMDTLGALALATEPPQDDLMKRSPVGRKGNFISNVMWRNILGQSLYQLVIIWCLQTKGKTMFGLDGPDSDLTLNTLIFNIFVFCQVFNEISSREMEKIDVFKGILKNYVFVAVLTCTVVFQVIIIELLGTFADTTPLNLGQWLVSIILGFLGMPVAAALKMIPV 1017          
BLAST of CN188552 vs. ExPASy Swiss-Prot
Match: ACA11_ARATH (Putative calcium-transporting ATPase 11, plasma membrane-type OS=Arabidopsis thaliana GN=ACA11 PE=2 SV=1)

HSP 1 Score: 271.552 bits (693), Expect = 4.198e-72
Identity = 132/241 (54.77%), Postives = 178/241 (73.86%), Query Frame = -2
Query:  159 EVAKESSDIVIMDDNFTSVVTVLRWGRCVYNNIQKFLQFQLTVNVAALVINFVAAVSSGKVPLTAVQLLWVNLIMDTLGALALATEQPTNDLMSKPPVGRSEPLITKLMWRNLIPQAIYQVTILLTLQFKGRSIFSVN----ESVKDTMIFNTFVFCQIFNEFNARKLEKKNIFKGIHKNKLFLAIIGITIVLQLIMVEFLKKFADTERLNWGQWAACIGIAAMSWPIGFLFKCIPVSGTQ 869
            EVAKE++D++IMDDNF ++V V +WGR VY NIQKF+QFQLTVNV AL+INFV+A  +G  PLTAVQLLWVN+IMDTLGALALATE P   LM + P+GR+   IT+ MWRN+I Q+IYQ+ +L  L F G+ I ++N      V +T+IFN+FVFCQ+FNE N+R++EK N+F+G+ K+ +F+A++  T+  Q+I+VEFL  FA T  L+W  W  CI I ++S  +    KCIPV   +
Sbjct:  769 EVAKENADVIIMDDNFATIVNVAKWGRAVYINIQKFVQFQLTVNVVALIINFVSACITGSAPLTAVQLLWVNMIMDTLGALALATEPPNEGLMKRQPIGRTASFITRAMWRNIIGQSIYQLIVLGILNFAGKQILNLNGPDSTIVLNTIIFNSFVFCQVFNEVNSREIEKINVFEGMFKSWVFVAVMTATVGFQVIIVEFLGAFASTVPLSWQHWLLCILIGSVSMILAVGLKCIPVESNR 1009          
The following BLAST results are available for this feature:
BLAST of CN188552 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 124
Match NameE-valueIdentityDescription
ACA13_ARATH1.689e-10578.11Putative calcium-transporting ATPase 13, plasma me... [more]
ACA12_ARATH7.094e-10475.31Putative calcium-transporting ATPase 12, plasma me... [more]
ACA8_ARATH6.888e-9169.58Calcium-transporting ATPase 8, plasma membrane-typ... [more]
ACA10_ARATH1.344e-8666.39Calcium-transporting ATPase 10, plasma membrane-ty... [more]
ACA9_ARATH2.535e-8564.90Calcium-transporting ATPase 9, plasma membrane-typ... [more]
ACA5_ORYSJ3.669e-7654.43Probable calcium-transporting ATPase 5, plasma mem... [more]
ACA4_ORYSJ4.057e-7554.01Probable calcium-transporting ATPase 4, plasma mem... [more]
ACA3_ORYSJ4.198e-7254.01Calcium-transporting ATPase 3, plasma membrane-typ... [more]
ACA1_ARATH4.198e-7254.85Calcium-transporting ATPase 1, chloroplastic OS=Ar... [more]
ACA11_ARATH4.198e-7254.77Putative calcium-transporting ATPase 11, plasma me... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0006E16_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0006E16, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188552 ID=CN188552; Name=CN188552; organism=Citrus sinensis; type=EST; length=870bp
TATCAAATAATTTCATTATGAACTAATTAGCTATTAGACTTATATCTATA
GATCGAGCTAAGAAACTTATGAAACTAAACAAAGATCATAGAAAATATTA
ACAGATAGAGAATTGATTATGGATTTGTGATTCATGAAGCTCTTTGCTTG
AAAAGCAGCTGCGTGCCAGAAACGGGAATGCACTTGAAGAGAAAACCAAT
TGGCCAAGACATAGCTGCAATGCCAATACAAGCTGCCCATTGCCCCCAGT
TCAGCCTCTCAGTATCAGCAAACTTCTTCAGAAACTCTACCATTATGAGT
TGAAGAACAATGGTAATTCCAATGATTGCTAGAAACAACTTGTTCTTGTG
TATCCCTTTGAATATATTCTTCTTCTCAAGTTTCCTAGCATTGAACTCAT
TGAAGATTTGGCAGAAGACAAAAGTATTGAAAATCATGGTATCTTTAACA
CTTTCATTCACGCTGAAGATTGATCTTCCTTTAAATTGCAGAGTCAGTAA
GATGGTCACCTGATAAATGGCCTGAGGGATGAGATTCCTCCACATGAGTT
TTGTTATCAGAGGCTCGGATCGGCCAACGGGAGGCTTTGACATGAGATCA
TTGGTGGGCTGCTCAGTGGCCAATGCCAATGCTCCTAGTGTATCCATTAT
CAGGTTCACCCAGAGCAGCTGAACAGCAGTTAGTGGGACTTTTCCTGAAG
AAACAGCAGCAACAAAGTTGATGACAAGAGCAGCAACATTGACTGTGAGC
TGAAATTGAAGGAATTTCTGAATGTTGTTGTAGACACATCGTCCCCATCT
CAGAACTGTCACTACAGAGGTGAAGTTATCATCCATAATGACGATATCTG
AGCTCTCCTTTGCCACTTCA
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