CN188551
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN188551 vs. ExPASy Swiss-Prot
Match: MDHP_MEDSA (Malate dehydrogenase [NADP], chloroplastic OS=Medicago sativa GN=MDH1 PE=2 SV=1) HSP 1 Score: 250.751 bits (639), Expect = 5.521e-66 Identity = 130/151 (86.09%), Postives = 139/151 (92.05%), Query Frame = 1 Query: 262 ISCSV--NQVQAPVAVEQDDPKSKTNDCYGVFCLTYDLKAEEETKSWKKMVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDAEWALLIGAKPRGPGMERAGLLDIN 708 ISCSV NQVQAP AV+ DPKSK DCYGVFCLTYDLKAEEETKSWKK++ IAVSGAAGMI+NHLLFKLA+GEV GP+QPIALKLLGSERSLQALEGVAMELEDSLFPLLREV I I+PYE+F+DAEWALLIGAKPRGPGMERA LLDIN Sbjct: 47 ISCSVAPNQVQAP-AVQTQDPKSKP-DCYGVFCLTYDLKAEEETKSWKKLITIAVSGAAGMISNHLLFKLASGEVFGPNQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVVISIDPYEVFQDAEWALLIGAKPRGPGMERAALLDIN 195
BLAST of CN188551 vs. ExPASy Swiss-Prot
Match: MDHP_PEA (Malate dehydrogenase [NADP], chloroplastic OS=Pisum sativum PE=1 SV=2) HSP 1 Score: 248.44 bits (633), Expect = 2.740e-65 Identity = 128/151 (84.77%), Postives = 137/151 (90.73%), Query Frame = 1 Query: 262 ISCSV--NQVQAPVAVEQDDPKSKTNDCYGVFCLTYDLKAEEETKSWKKMVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDAEWALLIGAKPRGPGMERAGLLDIN 708 ISCSV NQVQ P A QD PK K DCYGVFCLTYDLKAEEETKSWKK++NIAVSGAAGMI+NHLLFKLA+GEV GPDQPIALKLLGSERS+QALEGVAMELEDSLFPLLREV I I+PYE+F+DAEWALLIGAKPRGPG+ERA LLDIN Sbjct: 51 ISCSVAPNQVQVPAAQTQD-PKGKP-DCYGVFCLTYDLKAEEETKSWKKLINIAVSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERSIQALEGVAMELEDSLFPLLREVVISIDPYEVFQDAEWALLIGAKPRGPGVERAALLDIN 199
BLAST of CN188551 vs. ExPASy Swiss-Prot
Match: MDHP_MESCR (Malate dehydrogenase [NADP], chloroplastic OS=Mesembryanthemum crystallinum GN=MDH1 PE=2 SV=1) HSP 1 Score: 239.965 bits (611), Expect = 9.746e-63 Identity = 121/151 (80.13%), Postives = 133/151 (88.08%), Query Frame = 1 Query: 262 ISCSV--NQVQAPVAVEQDDPKSKTNDCYGVFCLTYDLKAEEETKSWKKMVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDAEWALLIGAKPRGPGMERAGLLDIN 708 I CSV NQVQAPVAV + K +CYG+FCLTYDLKAEEETK+WKKM+ IAVSGAAGMI+NHLLFKLA+GEV GPDQPIALKLLGSERS ALEGVAMELEDSL+PLLR V IGI+PY++F+DAEWALLIGAKPRGPGMERA LLDIN Sbjct: 49 IRCSVAPNQVQAPVAVPAEGQTGKP-ECYGIFCLTYDLKAEEETKTWKKMITIAVSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERSFNALEGVAMELEDSLYPLLRAVSIGIDPYDIFQDAEWALLIGAKPRGPGMERADLLDIN 198
BLAST of CN188551 vs. ExPASy Swiss-Prot
Match: MDHP_FLABI (Malate dehydrogenase [NADP], chloroplastic OS=Flaveria bidentis PE=1 SV=1) HSP 1 Score: 233.802 bits (595), Expect = 6.984e-61 Identity = 116/153 (75.82%), Postives = 134/153 (87.58%), Query Frame = 1 Query: 259 TISCSV---NQVQAPVAVEQDDPKSKTNDCYGVFCLTYDLKAEEETKSWKKMVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDAEWALLIGAKPRGPGMERAGLLDIN 708 +I CSV +Q+QAP+ P + +C+GVFCLTYDLKAEEETKSWKK++N+AVSGAAGMI+NHLLFKLA+GEV GPDQPI+LKLLGSERS ALEGVAMELEDSL+PLLR+V IGI+PYE+F+DAEWALLIGAKPRGPGMERA LLDIN Sbjct: 65 SIRCSVTSSDQIQAPL------PAKQKPECFGVFCLTYDLKAEEETKSWKKIINVAVSGAAGMISNHLLFKLASGEVFGPDQPISLKLLGSERSFAALEGVAMELEDSLYPLLRQVSIGIDPYEIFQDAEWALLIGAKPRGPGMERADLLDIN 211
BLAST of CN188551 vs. ExPASy Swiss-Prot
Match: MDHP1_SORBI (Malate dehydrogenase [NADP] 1, chloroplastic OS=Sorghum bicolor PE=1 SV=1) HSP 1 Score: 230.335 bits (586), Expect = 7.722e-60 Identity = 118/153 (77.12%), Postives = 131/153 (85.62%), Query Frame = 1 Query: 259 TISCSVN---QVQAPVAVEQDDPKSKTNDCYGVFCLTYDLKAEEETKSWKKMVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDAEWALLIGAKPRGPGMERAGLLDIN 708 T+ CSV+ QVQ VA + K DC+GVFC TYDLKAE++TKSWKK+VNIAVSGAAGMI+NHLLFKLA+GEV G DQPIALKLLGSERS QALEGVAMELEDSL+PLLREV IGI+PYE+FED +WALLIGAKPRGPGMERA LLDIN Sbjct: 37 TVRCSVDAAKQVQDGVATAEAPATRK--DCFGVFCTTYDLKAEDKTKSWKKLVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPLLREVSIGIDPYEVFEDVDWALLIGAKPRGPGMERAALLDIN 187
BLAST of CN188551 vs. ExPASy Swiss-Prot
Match: MDHP_SPIOL (Malate dehydrogenase [NADP], chloroplastic OS=Spinacia oleracea GN=MDH PE=1 SV=1) HSP 1 Score: 229.18 bits (583), Expect = 1.720e-59 Identity = 117/151 (77.48%), Postives = 128/151 (84.77%), Query Frame = 1 Query: 262 ISCSV--NQVQAPVAVEQDDPKSKTNDCYGVFCLTYDLKAEEETKSWKKMVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDAEWALLIGAKPRGPGMERAGLLDIN 708 I CS+ NQVQ PVAV K +CYGVFC TYDLK EEET+SWKKM+ IA+SGAAG I+NHLLFKLA+G V GPDQPIALKLLGSE+S ALEGVAMELEDSL+PLLREV IGI+PYE+FEDAEWALLIGAKPRGPGMERA LLDIN Sbjct: 43 ICCSLAPNQVQTPVAVPTGAQSIKP-ECYGVFCWTYDLKKEEETRSWKKMITIAISGAAGTISNHLLFKLASGVVFGPDQPIALKLLGSEKSFHALEGVAMELEDSLYPLLREVSIGIDPYEVFEDAEWALLIGAKPRGPGMERADLLDIN 192
BLAST of CN188551 vs. ExPASy Swiss-Prot
Match: MDHP2_SORBI (Malate dehydrogenase [NADP] 2, chloroplastic OS=Sorghum bicolor PE=1 SV=1) HSP 1 Score: 223.016 bits (567), Expect = 1.233e-57 Identity = 113/154 (73.38%), Postives = 126/154 (81.82%), Query Frame = 1 Query: 259 TISCSV----NQVQAPVAVEQDDPKSKTNDCYGVFCLTYDLKAEEETKSWKKMVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDAEWALLIGAKPRGPGMERAGLLDIN 708 T+ CSV QVQ VA + N+C+GVFC YDLKAE++TKSWKK+V IAVSGAAGMI+NHLLFKLA+GEV G DQPIALKLLGSERS QALEGV MELEDSL+PLLREV IGI PYE+F+D +WALLIGAKPRGPGMERA LLDIN Sbjct: 37 TVRCSVVDAAKQVQDGVATAVGGGAASGNECFGVFCNIYDLKAEDKTKSWKKLVTIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVRMELEDSLYPLLREVSIGIGPYEVFQDVDWALLIGAKPRGPGMERAALLDIN 190
BLAST of CN188551 vs. ExPASy Swiss-Prot
Match: MDHP_MAIZE (Malate dehydrogenase [NADP], chloroplastic OS=Zea mays PE=1 SV=1) HSP 1 Score: 222.631 bits (566), Expect = 1.610e-57 Identity = 111/155 (71.61%), Postives = 130/155 (83.87%), Query Frame = 1 Query: 259 TISCSVNQVQ-----APVAVEQDDPKSKTNDCYGVFCLTYDLKAEEETKSWKKMVNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDAEWALLIGAKPRGPGMERAGLLDIN 708 T+ CSV+ + AV + P S+ +C+GVFC TYDLKAE++TKSW+K+VN+AVSGAAGMI+NHLLFKLA+GEV G DQPIALKLLGSERS QALEGVAMELEDSL+PLLREV IGI+PY +F+D +WALLIGAKPRGPGMERA LLDIN Sbjct: 37 TVRCSVDATKQAQDGVATAVATEAPASR-KECFGVFCTTYDLKAEDKTKSWRKLVNVAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPLLREVSIGIDPYVVFQDVDWALLIGAKPRGPGMERAALLDIN 190
BLAST of CN188551 vs. ExPASy Swiss-Prot
Match: MDH_MYCPA (Malate dehydrogenase OS=Mycobacterium paratuberculosis GN=mdh PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 1.125e-26 Identity = 59/101 (58.42%), Postives = 79/101 (78.22%), Query Frame = 1 Query: 406 VNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDAEWALLIGAKPRGPGMERAGLLDIN 708 + +AV+GAAG I LLF+LA+G +LGPD+PI L+LL E +L+ALEGV MEL+D FPLL V+IG +P ++F+ A ALL+GA+PRGPGMER+ LL+ N Sbjct: 6 LKVAVTGAAGQIGYSLLFRLASGSLLGPDRPIELRLLEIEPALKALEGVVMELDDCAFPLLSGVEIGADPNKIFDGANLALLVGARPRGPGMERSDLLEAN 106
BLAST of CN188551 vs. ExPASy Swiss-Prot
Match: MDH_MYCA1 (Malate dehydrogenase OS=Mycobacterium avium (strain 104) GN=mdh PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 1.125e-26 Identity = 59/101 (58.42%), Postives = 79/101 (78.22%), Query Frame = 1 Query: 406 VNIAVSGAAGMIANHLLFKLAAGEVLGPDQPIALKLLGSERSLQALEGVAMELEDSLFPLLREVKIGINPYELFEDAEWALLIGAKPRGPGMERAGLLDIN 708 + +AV+GAAG I LLF+LA+G +LGPD+PI L+LL E +L+ALEGV MEL+D FPLL V+IG +P ++F+ A ALL+GA+PRGPGMER+ LL+ N Sbjct: 6 LKVAVTGAAGQIGYSLLFRLASGSLLGPDRPIELRLLEIEPALKALEGVVMELDDCAFPLLSGVEIGADPNKIFDGANLALLVGARPRGPGMERSDLLEAN 106 The following BLAST results are available for this feature:
BLAST of CN188551 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 186
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188551 ID=CN188551; Name=CN188551; organism=Citrus sinensis; type=EST; length=709bpback to top |