CN188494

Overview
NameCN188494
Unique NameCN188494
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length732
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13608 contig Csv1_Contig13608:241..972. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN188494 vs. ExPASy Swiss-Prot
Match: CADH1_OCIBA (Cinnamyl alcohol dehydrogenase 1 OS=Ocimum basilicum GN=CAD1 PE=1 SV=1)

HSP 1 Score: 309.686 bits (792), Expect = 1.046e-83
Identity = 155/242 (64.05%), Postives = 168/242 (69.42%), Query Frame = 3
Query:    6 HTDIHQIKNDLGMSNYPMXXXXXXXXXXXXXXXXXSNFXXXXXXXXXXXXXCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSXXXXXXXXXXXXXXXXXXXAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANHPLEPYXXXXXXXXXXXXTGVINTPMQFLTPMVM 731
            HTD+HQIKNDLGMSNYPM                 + F              C NCRPC +D+EQYCNKKIWSYNDVY DGKPTQGGFA +MVVDQKFVVKIPDGMA EQAAPLLCAGVTV+SPL+HFGLKQS                   AKAMGHHVTVISSSDKKR EA++HLGAD YLVSSDA RMQEAADSLDYIIDTVP  HPLEPY             GV+NTP+QF++PMVM
Sbjct:   48 HTDVHQIKNDLGMSNYPMVPGHEVVGEVVEVGSEVTKFRAGDVVGVGCIVGSCGNCRPCNSDIEQYCNKKIWSYNDVYPDGKPTQGGFAGAMVVDQKFVVKIPDGMAPEQAAPLLCAGVTVYSPLNHFGLKQSGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSDKKRAEALDHLGADDYLVSSDAARMQEAADSLDYIIDTVPVFHPLEPYLSLLKIDGKLILMGVVNTPLQFVSPMVM 289          
BLAST of CN188494 vs. ExPASy Swiss-Prot
Match: CADH1_ARACO (Probable cinnamyl alcohol dehydrogenase 1 OS=Aralia cordata GN=CAD1 PE=2 SV=1)

HSP 1 Score: 305.834 bits (782), Expect = 1.510e-82
Identity = 156/243 (64.20%), Postives = 170/243 (69.96%), Query Frame = 3
Query:    6 HTDIHQIKNDLGMSNYPMXXXXXXXXXXXXXXXXXSNFXXXXXXXXXXXXXCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQ-SXXXXXXXXXXXXXXXXXXXAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANHPLEPYXXXXXXXXXXXXTGVINTPMQFLTPMVM 731
            HTDIHQIKNDLG SNYPM                 + F             CC+ CRPC+ADVEQYCNKKIWSYNDVYTDGKPTQGGF+  MVVDQKFVVKIPDGMA EQAAPLLCAGVTV+SPL+HFGLK+ S                   AKAMGHHVTVISSSDKK+ EA++HLGAD YLVSSDAT+MQEAADSLDYIIDTVP  HPLEPY             GVINTP+QF++PMVM
Sbjct:   48 HTDIHQIKNDLGASNYPMVPGHEVVGEVVEVGSDVTKFKVGDCVGDGTIVGCCKTCRPCKADVEQYCNKKIWSYNDVYTDGKPTQGGFSGHMVVDQKFVVKIPDGMAPEQAAPLLCAGVTVYSPLTHFGLKEISGLRGGILGLGGVGHMGVKLAKAMGHHVTVISSSDKKKEEAIDHLGADAYLVSSDATQMQEAADSLDYIIDTVPVFHPLEPYLSLLKLDGKLILMGVINTPLQFISPMVM 290          
BLAST of CN188494 vs. ExPASy Swiss-Prot
Match: CADH_POPDE (Probable cinnamyl alcohol dehydrogenase OS=Populus deltoides PE=2 SV=2)

HSP 1 Score: 301.212 bits (770), Expect = 3.720e-81
Identity = 151/242 (62.40%), Postives = 166/242 (68.60%), Query Frame = 3
Query:    6 HTDIHQIKNDLGMSNYPMXXXXXXXXXXXXXXXXXSNFXXXXXXXXXXXXXCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSXXXXXXXXXXXXXXXXXXXAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANHPLEPYXXXXXXXXXXXXTGVINTPMQFLTPMVM 731
            HTDIHQIKNDLGMS+YPM                 + F              C+NC PC++++EQYCNKKIWSYNDVYTDGKPTQGGFAESMVV QKFVV+IPDGM+ EQAAPLLCAG+TV+SPL HFGLKQS                   AKAMGHHVTVISSSDKKR EAMEHLGAD+YLVSSD   MQ+AAD LDYIIDTVP  HPLEPY             GVIN P+QF+TPMVM
Sbjct:   48 HTDIHQIKNDLGMSHYPMVPGHEVVGEVVEVGSDVTRFKVGDVVGVGVIVGSCKNCHPCKSEIEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVHQKFVVRIPDGMSPEQAAPLLCAGLTVYSPLKHFGLKQSGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSDKKREEAMEHLGADEYLVSSDVESMQKAADQLDYIIDTVPVVHPLEPYLSLLKLDGKLILMGVINAPLQFVTPMVM 289          
BLAST of CN188494 vs. ExPASy Swiss-Prot
Match: CADH1_TOBAC (Probable cinnamyl alcohol dehydrogenase 1 OS=Nicotiana tabacum GN=CAD14 PE=1 SV=1)

HSP 1 Score: 301.212 bits (770), Expect = 3.720e-81
Identity = 149/242 (61.57%), Postives = 167/242 (69.01%), Query Frame = 3
Query:    6 HTDIHQIKNDLGMSNYPMXXXXXXXXXXXXXXXXXSNFXXXXXXXXXXXXXCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSXXXXXXXXXXXXXXXXXXXAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANHPLEPYXXXXXXXXXXXXTGVINTPMQFLTPMVM 731
            HTD+HQ+KNDLGMSNYP+                 S F              CRNC PC+ D+EQYCNKKIW+ NDVYTDGKPTQGGFA+SMVVDQKFVVKIP+GMA EQAAPLLCAG+TV+SPL+HFG KQS                   AKAMGHHVTVISSS+KKR EA+EHLGAD YLVSSD  +MQEA+DSLDYIIDTVP  HPLEPY             GVINTP+QF++PMVM
Sbjct:   48 HTDLHQVKNDLGMSNYPLVPGHEVVGEVVEVGPDVSKFKVGDTVGVGLLVGSCRNCGPCKRDIEQYCNKKIWNCNDVYTDGKPTQGGFAKSMVVDQKFVVKIPEGMAPEQAAPLLCAGITVYSPLNHFGFKQSGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSNKKRQEALEHLGADDYLVSSDTDKMQEASDSLDYIIDTVPVGHPLEPYLSLLKIDGKLILMGVINTPLQFISPMVM 289          
BLAST of CN188494 vs. ExPASy Swiss-Prot
Match: CADH4_ARATH (Cinnamyl alcohol dehydrogenase 4 OS=Arabidopsis thaliana GN=CAD4 PE=1 SV=1)

HSP 1 Score: 294.664 bits (753), Expect = 3.482e-79
Identity = 145/242 (59.92%), Postives = 166/242 (68.60%), Query Frame = 3
Query:    6 HTDIHQIKNDLGMSNYPMXXXXXXXXXXXXXXXXXSNFXXXXXXXXXXXXXCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSXXXXXXXXXXXXXXXXXXXAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANHPLEPYXXXXXXXXXXXXTGVINTPMQFLTPMVM 731
            HTDIHQIKNDLGMSNYPM                 S F             CC +C+PC +++EQYCNK+IWSYNDVYTDGKPTQGGFA++M+V+QKFVVKIP+GMA+EQAAPLLCAGVTV+SPLSHFGL  S                   AKAMGHHVTVISSSDKK+ EA+EHLGAD Y+VSSD   MQ  ADSLDYIIDTVP  HPL+PY             GVINTP+QF+TP+V+
Sbjct:   49 HTDIHQIKNDLGMSNYPMVPGHEVVGEVLEVGSDVSKFTVGDVVGVGVVVGCCGSCKPCSSELEQYCNKRIWSYNDVYTDGKPTQGGFADTMIVNQKFVVKIPEGMAVEQAAPLLCAGVTVYSPLSHFGLMASGLKGGILGLGGVGHMGVKIAKAMGHHVTVISSSDKKKEEAIEHLGADDYVVSSDPAEMQRLADSLDYIIDTVPVFHPLDPYLACLKLDGKLILMGVINTPLQFVTPLVI 290          
BLAST of CN188494 vs. ExPASy Swiss-Prot
Match: CADH_MEDSA (Probable cinnamyl alcohol dehydrogenase OS=Medicago sativa GN=CAD2 PE=1 SV=1)

HSP 1 Score: 291.967 bits (746), Expect = 2.257e-78
Identity = 146/242 (60.33%), Postives = 164/242 (67.77%), Query Frame = 3
Query:    6 HTDIHQIKNDLGMSNYPMXXXXXXXXXXXXXXXXXSNFXXXXXXXXXXXXXCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSXXXXXXXXXXXXXXXXXXXAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANHPLEPYXXXXXXXXXXXXTGVINTPMQFLTPMVM 731
            H+D+HQIKNDLGMSNYPM                 + F             CC++CR C++++EQYCNKKIWSYNDVYTDGK TQGGFAES VV+QKFVVKIP+G+A EQ APLLCAGVTV+SPLSHFGLK                     AKA+GHHVTVISSSDKK+ EA+E LGAD YLVSSD   MQEAADSLDYIIDTVP  HPLEPY             GVINTP+QF+TPMVM
Sbjct:   49 HSDLHQIKNDLGMSNYPMVPGHEVVGEVLEVGSNVTRFKVGEIVGVGLLVGCCKSCRACDSEIEQYCNKKIWSYNDVYTDGKITQGGFAESTVVEQKFVVKIPEGLAPEQVAPLLCAGVTVYSPLSHFGLKTPGLRGGILGLGGVGHMGVKVAKALGHHVTVISSSDKKKKEALEDLGADNYLVSSDTVGMQEAADSLDYIIDTVPVGHPLEPYLSLLKIDGKLILMGVINTPLQFVTPMVM 290          
BLAST of CN188494 vs. ExPASy Swiss-Prot
Match: CADH2_TOBAC (Probable cinnamyl alcohol dehydrogenase 2 OS=Nicotiana tabacum GN=CAD19 PE=1 SV=1)

HSP 1 Score: 289.656 bits (740), Expect = 1.120e-77
Identity = 144/242 (59.50%), Postives = 162/242 (66.94%), Query Frame = 3
Query:    6 HTDIHQIKNDLGMSNYPMXXXXXXXXXXXXXXXXXSNFXXXXXXXXXXXXXCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSXXXXXXXXXXXXXXXXXXXAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANHPLEPYXXXXXXXXXXXXTGVINTPMQFLTPMVM 731
            H+D+HQ+KNDLGMSNYP+                 S F              CRNC PC+ ++EQYCNKKIW+ NDVYTDGKPTQGGFA SMVVDQ FVVKIP+GMA EQAAPLLCAG+TV+SP +HFG  QS                   AKAMGHHVTVISSS+KKR EA+EHLGAD YLVSSD  +MQEAADSLDYIIDTVP  HPLE Y             GVINTP+QF++PMVM
Sbjct:   48 HSDLHQVKNDLGMSNYPLVPGHEVVGKVVEVGADVSKFKVGDTVGVGLLVGSCRNCGPCKREIEQYCNKKIWNCNDVYTDGKPTQGGFANSMVVDQNFVVKIPEGMAPEQAAPLLCAGITVYSPFNHFGFNQSGFRGGILGLGGVGHMGVKIAKAMGHHVTVISSSNKKRQEALEHLGADDYLVSSDTDKMQEAADSLDYIIDTVPVGHPLELYLSLLKIDGKLILIGVINTPLQFISPMVM 289          
BLAST of CN188494 vs. ExPASy Swiss-Prot
Match: CADH_EUCGL (Probable cinnamyl alcohol dehydrogenase OS=Eucalyptus globulus GN=CAD PE=2 SV=1)

HSP 1 Score: 284.648 bits (727), Expect = 3.603e-76
Identity = 141/242 (58.26%), Postives = 160/242 (66.12%), Query Frame = 3
Query:    6 HTDIHQIKNDLGMSNYPMXXXXXXXXXXXXXXXXXSNFXXXXXXXXXXXXXCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSXXXXXXXXXXXXXXXXXXXAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANHPLEPYXXXXXXXXXXXXTGVINTPMQFLTPMVM 731
            H+DIHQIKNDLGMS+YPM                 + +             CCR+C PC +D EQYCNKKIW+YNDVYTDGKPTQGGFA  +VV ++FVVKIPDG+  EQAAPL+CAGVTV+SPL  FGLKQS                   AKAMGHHVTVISSSDKKR EA+EHLGAD YLVSSD   M+EA DSLDYI DT+P  HPLEPY            TGVIN P+QF++PMVM
Sbjct:   48 HSDIHQIKNDLGMSHYPMVPGHEVVGEVLEVGSEVTKYRVGDRVGTGIVVGCCRSCSPCNSDQEQYCNKKIWNYNDVYTDGKPTQGGFAGEIVVGERFVVKIPDGLESEQAAPLMCAGVTVYSPLVRFGLKQSGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSDKKRTEALEHLGADAYLVSSDENGMKEATDSLDYIFDTIPVVHPLEPYLALLKLDGKLILTGVINAPLQFISPMVM 289          
BLAST of CN188494 vs. ExPASy Swiss-Prot
Match: CADH2_EUCGU (Probable cinnamyl alcohol dehydrogenase 2 OS=Eucalyptus gunnii GN=CAD2 PE=2 SV=1)

HSP 1 Score: 284.648 bits (727), Expect = 3.603e-76
Identity = 141/242 (58.26%), Postives = 160/242 (66.12%), Query Frame = 3
Query:    6 HTDIHQIKNDLGMSNYPMXXXXXXXXXXXXXXXXXSNFXXXXXXXXXXXXXCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSXXXXXXXXXXXXXXXXXXXAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANHPLEPYXXXXXXXXXXXXTGVINTPMQFLTPMVM 731
            H+DIHQIKNDLGMS+YPM                 + +             CCR+C PC +D EQYCNKKIW+YNDVYTDGKPTQGGFA  +VV ++FVVKIPDG+  EQAAPL+CAGVTV+SPL  FGLKQS                   AKAMGHHVTVISSSDKKR EA+EHLGAD YLVSSD   M+EA DSLDYI DT+P  HPLEPY            TGVIN P+QF++PMVM
Sbjct:   48 HSDIHQIKNDLGMSHYPMVPGHEVVGEVLEVGSEVTKYRVGDRVGTGIVVGCCRSCSPCNSDQEQYCNKKIWNYNDVYTDGKPTQGGFAGEIVVGERFVVKIPDGLESEQAAPLMCAGVTVYSPLVRFGLKQSGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSDKKRTEALEHLGADAYLVSSDENGMKEATDSLDYIFDTIPVVHPLEPYLALLKLDGKLILTGVINAPLQFISPMVM 289          
BLAST of CN188494 vs. ExPASy Swiss-Prot
Match: CADH1_EUCGU (Probable cinnamyl alcohol dehydrogenase 1 OS=Eucalyptus gunnii GN=CAD1 PE=3 SV=1)

HSP 1 Score: 282.337 bits (721), Expect = 1.788e-75
Identity = 139/242 (57.44%), Postives = 159/242 (65.70%), Query Frame = 3
Query:    6 HTDIHQIKNDLGMSNYPMXXXXXXXXXXXXXXXXXSNFXXXXXXXXXXXXXCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSXXXXXXXXXXXXXXXXXXXAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANHPLEPYXXXXXXXXXXXXTGVINTPMQFLTPMVM 731
            H+DIHQIKNDLGMS+YPM                 + +             CCR+C PC +D EQYCNKKIW+YNDVYTDGKPTQGGFA  +VV ++FVVKIPDG+  EQAAPL+CAGVTV+ PL  FGLKQS                   AKAMGHHVTVISSSDKKR EA+EHLGAD YLVSSD   M+EA DSLDY+ DT+P  HPLEPY            TGVIN P+QF++PMVM
Sbjct:   48 HSDIHQIKNDLGMSHYPMVPGHEVVGEVLEVGSEVTKYRVGDRVGTGIVVGCCRSCSPCNSDQEQYCNKKIWNYNDVYTDGKPTQGGFAGEIVVGERFVVKIPDGLESEQAAPLMCAGVTVYRPLVRFGLKQSGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSDKKRTEALEHLGADAYLVSSDENGMKEATDSLDYVFDTIPVVHPLEPYLALLKLDGKLILTGVINAPLQFISPMVM 289          
The following BLAST results are available for this feature:
BLAST of CN188494 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 54
Match NameE-valueIdentityDescription
CADH1_OCIBA1.046e-8364.05Cinnamyl alcohol dehydrogenase 1 OS=Ocimum basilic... [more]
CADH1_ARACO1.510e-8264.20Probable cinnamyl alcohol dehydrogenase 1 OS=Arali... [more]
CADH_POPDE3.720e-8162.40Probable cinnamyl alcohol dehydrogenase OS=Populus... [more]
CADH1_TOBAC3.720e-8161.57Probable cinnamyl alcohol dehydrogenase 1 OS=Nicot... [more]
CADH4_ARATH3.482e-7959.92Cinnamyl alcohol dehydrogenase 4 OS=Arabidopsis th... [more]
CADH_MEDSA2.257e-7860.33Probable cinnamyl alcohol dehydrogenase OS=Medicag... [more]
CADH2_TOBAC1.120e-7759.50Probable cinnamyl alcohol dehydrogenase 2 OS=Nicot... [more]
CADH_EUCGL3.603e-7658.26Probable cinnamyl alcohol dehydrogenase OS=Eucalyp... [more]
CADH2_EUCGU3.603e-7658.26Probable cinnamyl alcohol dehydrogenase 2 OS=Eucal... [more]
CADH1_EUCGU1.788e-7557.44Probable cinnamyl alcohol dehydrogenase 1 OS=Eucal... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0006C12_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0006C12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188494 ID=CN188494; Name=CN188494; organism=Citrus sinensis; type=EST; length=732bp
GCAGTCACACTGATATTCATCAAATAAAAAATGATCTGGGCATGTCTAAC
TATCCAATGGTTCCAGGACATGAGGTGGTGGGTGAAGTGAAGGAAGTGGG
TTCAGAAGTGAGCAACTTTAAAGTAGGAGACAAGGTTGGTGTTGGGGTTC
TCGTTGGTTGTTGCAGAAACTGCAGGCCGTGCGAGGCAGATGTTGAGCAG
TACTGCAACAAGAAAATCTGGTCCTATAACGATGTTTACACCGATGGCAA
GCCTACACAAGGCGGCTTTGCTGAGTCCATGGTCGTTGATCAAAAGTTTG
TGGTGAAAATACCAGATGGAATGGCACTGGAGCAGGCGGCACCGCTATTG
TGTGCTGGTGTGACAGTGTTCAGTCCCCTGAGCCACTTTGGATTGAAGCA
GAGCGGGCTGAGAGGAGGAATCTTGGGGCTCGGAGGAGTAGGCCACATGG
GGGTTTTGATAGCTAAGGCGATGGGACACCATGTTACTGTGATTAGCTCT
TCTGATAAGAAAAGAGTGGAAGCTATGGAGCATCTTGGTGCCGATCAGTA
CCTTGTCAGCTCCGACGCAACTCGTATGCAAGAAGCCGCTGACTCACTTG
ATTATATCATTGATACCGTACCCGCAAATCACCCTCTGGAGCCTTACCTT
TCGCTGTTGAAGCTTGATGGAAAGTTGATCTTGACGGGTGTCATTAACAC
TCCCATGCAGTTTCTTACCCCTATGGTTATGC
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