CN188488
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN188488 vs. ExPASy Swiss-Prot
Match: HS21C_SOLLC (Small heat shock protein, chloroplastic OS=Solanum lycopersicum GN=HSP21 PE=2 SV=1) HSP 1 Score: 226.098 bits (575), Expect = 1.627e-58 Identity = 112/164 (68.29%), Postives = 129/164 (78.66%), Query Frame = -1 Query: 284 NQGTQVERRPRRTALDISPFGLMDPSFPTRTMRQMLDTMDRLLEDTMAFPGRSRAGGGGQVRTPWDIKEEENEIKMRFDMPGLXXXXXXXXXXXXVLVIKGEHRAEEAG------GASFSSYDTRLQLPDNCEKDKVKAELKNGVLYISIPKTKVERKVIDVQI 757 NQGT VERRP R ALD+SPFG++DP P RTMRQM+DTMDRL EDTM FPGR+RA G G++RTPWDI ++ENEIKMRFDMPGL +LVIKGEH+ EE G G ++SSYDTRL LPDN KDK+KAELKNGVL+ISIPKT+VE+KVIDVQI Sbjct: 71 NQGTAVERRPTRMALDVSPFGVLDPMSPMRTMRQMIDTMDRLFEDTMTFPGRNRASGTGEIRTPWDIHDDENEIKMRFDMPGLSKEDVKVSVENDMLVIKGEHKKEEDGRDKHSWGRNYSSYDTRLSLPDNVVKDKIKAELKNGVLFISIPKTEVEKKVIDVQI 234
BLAST of CN188488 vs. ExPASy Swiss-Prot
Match: HS22C_PETHY (Small heat shock protein, chloroplastic OS=Petunia hybrida GN=HSP22 PE=2 SV=1) HSP 1 Score: 220.32 bits (560), Expect = 8.928e-57 Identity = 113/163 (69.33%), Postives = 128/163 (78.53%), Query Frame = -1 Query: 284 NQGTQVERRPRRTALDISPFGLMDPSFPTRTMRQMLDTMDRLLEDTMAFPGRSRAGGGGQVRTPWDIKEEENEIKMRFDMPGLXXXXXXXXXXXXVLVIKGEHRAEEAG-----GASFSSYDTRLQLPDNCEKDKVKAELKNGVLYISIPKTKVERKVIDVQI 757 NQG+ VERRPRR ALD+SPFGL+DP P RTMRQM+DTMDRL EDTM FPG SR G G++R PWDIK++ENEIKMRFDMPGL VLVIKGEH+ EE+G G ++SSYDTRL LPDN +KDKVKAELKNGVL ISIPKTKVE+KV DV+I Sbjct: 79 NQGSAVERRPRRMALDVSPFGLLDPMSPMRTMRQMMDTMDRLFEDTMTFPG-SRNRGTGEIRAPWDIKDDENEIKMRFDMPGLSKEEVKVSVEDDVLVIKGEHKKEESGKDDSWGRNYSSYDTRLSLPDNVDKDKVKAELKNGVLLISIPKTKVEKKVTDVEI 240
BLAST of CN188488 vs. ExPASy Swiss-Prot
Match: HS22C_SOYBN (Small heat shock protein, chloroplastic (Fragment) OS=Glycine max GN=HSP22 PE=2 SV=1) HSP 1 Score: 218.394 bits (555), Expect = 3.393e-56 Identity = 108/165 (65.45%), Postives = 132/165 (80.00%), Query Frame = -1 Query: 284 NQGTQVERRPRRTALDISPFGLMDPSFPTRTMRQMLDTMDRLLEDTMAFPGRSRAGGGGQVRTPWDIKEEENEIKMRFDMPGLXXXXXXXXXXXXVLVIKGEHRAEEAGGA-------SFSSYDTRLQLPDNCEKDKVKAELKNGVLYISIPKTKVERKVIDVQI 757 +QGT VE++PRRTA+DISPFG++DP P R+MRQ+LDTMDR+ EDTM FPGR+ GGG++R PWDIK+EE+EI+MRFDMPGL +LVIKG H++E+ G ++SSYDTRL+LPDNCEKDKVKAELKNGVLYI+IPKTKVERKVIDVQ+ Sbjct: 18 DQGTAVEKKPRRTAMDISPFGILDPWSPMRSMRQILDTMDRVFEDTMTFPGRNI--GGGEIRAPWDIKDEEHEIRMRFDMPGLAKEDVKVSVEDDMLVIKGGHKSEQEHGGDDSWSSRTYSSYDTRLKLPDNCEKDKVKAELKNGVLYITIPKTKVERKVIDVQV 180
BLAST of CN188488 vs. ExPASy Swiss-Prot
Match: HS25P_ARATH (25.3 kDa heat shock protein, chloroplastic OS=Arabidopsis thaliana GN=HSP25.3 PE=2 SV=1) HSP 1 Score: 209.92 bits (533), Expect = 1.207e-53 Identity = 109/164 (66.46%), Postives = 126/164 (76.83%), Query Frame = -1 Query: 284 NQGTQVERRPR-RTALDISPFGLMDPSFPTRTMRQMLDTMDRLLEDTMAFPGRSRAGGG-GQVRTPWDIKEEENEIKMRFDMPGLXXXXXXXXXXXXVLVIKGEHRAEEA----GGASFSSYDTRLQLPDNCEKDKVKAELKNGVLYISIPKTKVERKVIDVQI 757 NQG+ VE+RP+ R +D+SPFGL+DP P RTMRQMLDTMDR+ EDTM GR+R G G ++R PWDIKEEE+EIKMRFDMPGL VLVIKGE + E++ G S SSY TRLQLPDNCEKDK+KAELKNGVL+I+IPKTKVERKVIDVQI Sbjct: 63 NQGSSVEKRPQQRLTMDVSPFGLLDPLSPMRTMRQMLDTMDRMFEDTMPVSGRNRGGSGVSEIRAPWDIKEEEHEIKMRFDMPGLSKEDVKISVEDNVLVIKGEQKKEDSDDSWSGRSVSSYGTRLQLPDNCEKDKIKAELKNGVLFITIPKTKVERKVIDVQI 226
BLAST of CN188488 vs. ExPASy Swiss-Prot
Match: HS21C_PEA (Small heat shock protein, chloroplastic OS=Pisum sativum GN=HSP21 PE=2 SV=1) HSP 1 Score: 204.142 bits (518), Expect = 6.621e-52 Identity = 102/163 (62.58%), Postives = 126/163 (77.30%), Query Frame = -1 Query: 284 NQGTQVERRPRRTALDISPFGLMDPSFPTRTMRQMLDTMDRLLEDTMAFPGRSRAGGGGQVRTPWDIKEEENEIKMRFDMPGLXXXXXXXXXXXXVLVIKGEHRAEEAGG-----ASFSSYDTRLQLPDNCEKDKVKAELKNGVLYISIPKTKVERKVIDVQI 757 +QGT VER+PRR+++DISPFGL+DP P R+MRQMLDTMDR+ ED + PGR+ GGG++R PW+IK+EE+EI+MRFDMPG+ VLVIK +HR E G S+S YDTRL+LPDNCEK+KVKAELK+GVLYI+IPKTK+ER VIDVQI Sbjct: 71 DQGTAVERKPRRSSIDISPFGLLDPWSPMRSMRQMLDTMDRIFEDAITIPGRNI--GGGEIRVPWEIKDEEHEIRMRFDMPGVSKEDVKVSVEDDVLVIKSDHREENGGEDCWSRKSYSCYDTRLKLPDNCEKEKVKAELKDGVLYITIPKTKIERTVIDVQI 231
BLAST of CN188488 vs. ExPASy Swiss-Prot
Match: HS21C_WHEAT (Small heat shock protein, chloroplastic OS=Triticum aestivum GN=HSP21 PE=2 SV=1) HSP 1 Score: 180.644 bits (457), Expect = 7.840e-45 Identity = 92/168 (54.76%), Postives = 108/168 (64.29%), Query Frame = -1 Query: 284 QGTQVERRPRRTALDISPFGLMDPSFPTRTMRQMLDTMDRLLEDTMAFPGRSRAGGGGQVRTPWDIKEEENEIKMRFDMPGLXXXXXXXXXXXXVLVIKGEHRAEEAGG-----------ASFSSYDTRLQLPDNCEKDKVKAELKNGVLYISIPKTKVERKVIDVQI 754 QG V+RRPRR DISPFGL+DP P RTMRQMLDTMDRL +D + FP R + R PWDI E+E E+KMRFDMPGL LVI+GEH+ E G S SSYD RL LPD C+K +V+AELKNGVL +S+PK + ERKVIDVQ+ Sbjct: 70 QGNAVQRRPRRAGFDISPFGLVDPMSPMRTMRQMLDTMDRLFDDAVGFPTRRSPAARARRRMPWDIMEDEKEVKMRFDMPGLSREEVRVMVEDDALVIRGEHKKEAGEGQGEGGDGWWKERSVSSYDMRLALPDECDKSQVRAELKNGVLLVSVPKRETERKVIDVQV 237
BLAST of CN188488 vs. ExPASy Swiss-Prot
Match: HS26P_ORYSJ (26.7 kDa heat shock protein, chloroplastic OS=Oryza sativa subsp. japonica GN=HSP26.7 PE=2 SV=1) HSP 1 Score: 177.178 bits (448), Expect = 8.668e-44 Identity = 96/172 (55.81%), Postives = 117/172 (68.02%), Query Frame = -1 Query: 284 QGTQVERRPRRT-ALD-ISPFGLMDPSFPTRTMRQMLDTMDRLLEDT-MAFPGRSRAG-GGGQVRTPWDIKEEENEIKMRFDMPGLXXXXXXXXXXXXVLVIKGEHRAEEAGGA-----------SFSSYDTRLQLPDNCEKDKVKAELKNGVLYISIPKTKVERKVIDVQI 754 QG V+RRPRR+ ALD ISPFGL+DP P RTMRQMLDTMDR+ +D + FP R G+VR PWD+ E++ E++MRFDMPGL LVI+GEH+ EE GA S SSYD RL LPD C+K KV+AELKNGVL +++PKT+VERKVIDVQ+ Sbjct: 68 QGNAVQRRPRRSSALDGISPFGLVDPMSPMRTMRQMLDTMDRIFDDVALGFPATPRRSLATGEVRMPWDVMEDDKEVRMRFDMPGLSREEVKVMVEDDALVIRGEHKKEEGEGAEGSGDGWWKERSVSSYDMRLALPDECDKSKVRAELKNGVLLVTVPKTEVERKVIDVQV 239
BLAST of CN188488 vs. ExPASy Swiss-Prot
Match: HS23M_ARATH (23.6 kDa heat shock protein, mitochondrial OS=Arabidopsis thaliana GN=HSP23.6 PE=2 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 6.255e-18 Identity = 59/157 (37.58%), Postives = 86/157 (54.78%), Query Frame = -1 Query: 302 GTQVERR--PRRTALDISPFGLMDPSFPTRTMRQMLDTMDRLLEDTMAFPGRSRAGGGGQVRTPWDIKEEENEIKMRFDMPGLXXXXXXXXXXXXVLVIKGEHRAEEAGGASFSS----YDTRLQLPDNCEK-DKVKAELKNGVLYISIPKTKVERK 751 G + RR PRR S + DP PTR++ Q+L+ MD+ +E+ + +R G R WDIKE+++ + +R DMPGL LVI+GE + EE GG S + +R+ LPD K D++KAE+KNGVL + IPK K + + Sbjct: 49 GVDLYRRSVPRRRGDFFSD--VFDPFSPTRSVSQVLNLMDQFMENPLL--SATRGMGASGARRGWDIKEKDDALYLRIDMPGLSREDVKLALEQDTLVIRGEGKNEEDGGEEGESGNRRFTSRIGLPDKIYKIDEIKAEMKNGVLKVVIPKMKEQER 201
BLAST of CN188488 vs. ExPASy Swiss-Prot
Match: HS235_ARATH (23.5 kDa heat shock protein, mitochondrial OS=Arabidopsis thaliana GN=HSP23.5 PE=2 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.180e-16 Identity = 49/134 (36.57%), Postives = 77/134 (57.46%), Query Frame = -1 Query: 302 LMDPSFPTRTMRQMLDTMDRLLEDTMAFPGRSRAGGGGQVRTPWDIKEEENEIKMRFDMPGLXXXXXXXXXXXXVLVIKGEHRAEEAGGASFSS--YDTRLQLPDNCEK-DKVKAELKNGVLYISIPKTKVERK 694 ++DP PTR++ QML+ MD++ E + +R G VR W++KE+++ + +R DMPGL LVI+GE EE S + +R++LP+ K D++KAE+KNGVL + IPK K + + Sbjct: 70 ILDPFTPTRSLSQMLNFMDQVSEIPLV--SATRGMGASGVRRGWNVKEKDDALHLRIDMPGLSREDVKLALEQNTLVIRGEGETEEGEDVSGDGRRFTSRIELPEKVYKTDEIKAEMKNGVLKVVIPKIKEDER 201
BLAST of CN188488 vs. ExPASy Swiss-Prot
Match: HS23C_CHERU (Small heat shock protein, chloroplastic OS=Chenopodium rubrum GN=HSP23 PE=2 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 7.646e-16 Identity = 47/139 (33.81%), Postives = 75/139 (53.96%), Query Frame = -1 Query: 281 LMDPSFPTRTMRQMLDTMDRLLEDTMAFPGRSRAGGGGQVRTPWDIKEEENEIKMRFDMPGLXXXXXXXXXXXXVLVIKGEHRAEEAGGASFSSYDTRLQLPDNCEK-DKVKAELKNGVLYISIPKTKVERKVIDVQIL 694 + DP TR++ Q+++ MD+L+E+ R G G +R WD++E+E ++++ DMPGL L+IK E E Y +R++L N K D +KAE+KNGVL +++PK K E K Q++ Sbjct: 67 VFDPFRATRSVGQLMNLMDQLMENPFMAASR---GSGRAMRRGWDVREDEEALELKVDMPGLAKEDVKVSVEDNTLIIKSEAEKETEEEEQRRRYSSRIELTPNLYKIDGIKAEMKNGVLKVTVPKIKEEEKKDVFQVM 202 The following BLAST results are available for this feature:
BLAST of CN188488 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 14
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188488 ID=CN188488; Name=CN188488; organism=Citrus sinensis; type=EST; length=757bpback to top |