CN188487

Overview
NameCN188487
Unique NameCN188487
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length818
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN188487 vs. ExPASy Swiss-Prot
Match: DFRA_CALCH (Dihydroflavonol-4-reductase OS=Callistephus chinensis GN=F PE=2 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 9.234e-26
Identity = 76/219 (34.70%), Postives = 119/219 (54.34%), Query Frame = -3
Query:  175 VNVLNSCAKFPSIKRVVLTSSMAAVAYNGKPRTPDVVVDETWFSDPEVCKQSKL--W-YVLSKTLAEDAAWKFAKEKSIDMVTINPAMVIGPLLQPTLNTSAAAVLSLIKGAQTYPNATL--GWVNVKDVANAHIQAFEVPSASGRYCLVERVLHYSKLVNTVHELYPTFELPEKCADDKPYVPTYQVSKEKAKNLGIEF-IPLEVSLKETIESLKEKG 813
            ++++ SCAK  ++K++V TSS   V       T   V DE+ +SD +     K+  W Y +SKTLAE AA + AKE +ID V+I P +V+GP + PT   S    LSLI GA+++ +      +V++ D+   HI  +E P A GRY   ++     +L   + + +P + +P + A     +PT   S +K  ++G +F   LE   K  I+S KEKG
Sbjct:  109 LSIIRSCAKAKTVKKLVYTSSAGTVNVQ---ETQLPVYDESHWSDLDFIYSKKMTAWMYFVSKTLAEKAAMEAAKENNIDFVSIIPPLVVGPFINPTFPPSLITALSLINGAESHYSIIKQGQYVHLDDLCECHIFLYENPEAKGRYICSKQDATIHQLARMIKQKWPEYHVPTQFAGIDEELPTVSFSSKKLIDMGFKFKYDLEDMFKGAIDSCKEKG 324          
BLAST of CN188487 vs. ExPASy Swiss-Prot
Match: DFRA_VITVI (Dihydroflavonol-4-reductase OS=Vitis vinifera GN=DFR PE=1 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 4.583e-25
Identity = 74/219 (33.79%), Postives = 115/219 (52.51%), Query Frame = -3
Query:  175 VNVLNSCAKFPSIKRVVLTSSMAAVAYNGKPRTPDVVVDETWFSDPEVCKQSKL--W-YVLSKTLAEDAAWKFAKEKSIDMVTINPAMVIGPLLQPTLNTSAAAVLSLIKGAQTYPNATL--GWVNVKDVANAHIQAFEVPSASGRYCLVERVLHYSKLVNTVHELYPTFELPEKCADDKPYVPTYQVSKEKAKNLGIEF-IPLEVSLKETIESLKEKG 813
            + ++ SCA   +++R+V TSS   V    + + P  V DE+ +SD E C+  K+  W Y +SKTLAE AAWK+AKE +ID +TI P +V+GP +  ++  S    LS I G + + +      +V++ D+ NAHI  FE P A GRY           L   + E YP + +P +       + +   S +K  +LG EF   LE      +++ + KG
Sbjct:  108 LGIMKSCAAAKTVRRLVFTSSAGTVNIQ-EHQLP--VYDESCWSDMEFCRAKKMTAWMYFVSKTLAEQAAWKYAKENNIDFITIIPTLVVGPFIMSSMPPSLITALSPITGNEAHYSIIRQGQFVHLDDLCNAHIYLFENPKAEGRYICSSHDCIILDLAKMLREKYPEYNIPTEFKGVDENLKSVCFSSKKLTDLGFEFKYSLEDMFTGAVDTCRAKG 323          
BLAST of CN188487 vs. ExPASy Swiss-Prot
Match: DFRA_MALDO (Bifunctional dihydroflavonol 4-reductase/flavanone 4-reductase OS=Malus domestica GN=DFR PE=1 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 5.985e-25
Identity = 73/219 (33.33%), Postives = 115/219 (52.51%), Query Frame = -3
Query:  175 VNVLNSCAKFPSIKRVVLTSSMAAVAYNGKPRTPDVVVDETWFSDPEVCKQSKL--W-YVLSKTLAEDAAWKFAKEKSIDMVTINPAMVIGPLLQPTLNTSAAAVLS-LIKGAQTYPNATLG-WVNVKDVANAHIQAFEVPSASGRYCLVERVLHYSKLVNTVHELYPTFELPEKCADDKPYVPTYQVSKEKAKNLGIEF-IPLEVSLKETIESLKEKG 813
            +++L +C K  +++++V TSS   V      +    V DE+ +SD E C+  K+  W Y +SKTLAE AAWK+AKE +ID +TI P +VIGP L P++  S    LS +++    Y     G +V++ D+  +HI  +E P A GRY          +LV  + E YP + +P K       +     S +K + +G EF   LE      +++ + KG
Sbjct:  108 LDILKACQKAKTVRKLVFTSSAGTVNVEEHQKP---VYDESNWSDVEFCRSVKMTGWMYFVSKTLAEQAAWKYAKENNIDFITIIPTLVIGPFLMPSMPPSLITGLSPILRNESHYGIIKQGQYVHLDDLCLSHIYLYEHPKAEGRYICSSHDATIHELVKMLREKYPEYNIPTKFKGIDDNLEPVHFSSKKLREIGFEFKYSLEDMFVGAVDACRAKG 323          
BLAST of CN188487 vs. ExPASy Swiss-Prot
Match: DFRA_PYRCO (Bifunctional dihydroflavonol 4-reductase/flavanone 4-reductase OS=Pyrus communis GN=DFR PE=1 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.741e-24
Identity = 72/219 (32.88%), Postives = 115/219 (52.51%), Query Frame = -3
Query:  175 VNVLNSCAKFPSIKRVVLTSSMAAVAYNGKPRTPDVVVDETWFSDPEVCKQSKL--W-YVLSKTLAEDAAWKFAKEKSIDMVTINPAMVIGPLLQPTLNTSAAAVLS-LIKGAQTYPNATLG-WVNVKDVANAHIQAFEVPSASGRYCLVERVLHYSKLVNTVHELYPTFELPEKCADDKPYVPTYQVSKEKAKNLGIEF-IPLEVSLKETIESLKEKG 813
            +++L +C K  +++++V TSS   V      +    V DE+ +SD E C+  K+  W Y +SKTLAE AAWK+AKE +ID +TI P +VIGP L P++  S    LS +++    Y     G +V++ D+  +HI  ++ P A GRY          +LV  + E YP + +P K       +     S +K + +G EF   LE      +++ + KG
Sbjct:  108 LDILKACQKAKTVRKLVFTSSAGTVNVEEHQKP---VYDESNWSDVEFCRSVKMTGWMYFVSKTLAEQAAWKYAKENNIDFITIIPTLVIGPFLMPSMPPSLITGLSPILRNESHYGIIKQGQYVHLDDLCLSHIYLYKHPKAEGRYICSSHDATIHELVKMLREKYPEYNIPTKFKGIDDNLEPVHFSSKKLREIGFEFKYSLEDMFVGAVDACRAKG 323          
BLAST of CN188487 vs. ExPASy Swiss-Prot
Match: DFRA_GERHY (Dihydroflavonol-4-reductase OS=Gerbera hybrida GN=DFR PE=2 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.802e-21
Identity = 69/219 (31.51%), Postives = 110/219 (50.23%), Query Frame = -3
Query:  175 VNVLNSCAKFPSIKRVVLTSSMAAVAYNGKPRTPDVVVDETWFSDPEVCKQSKL--W-YVLSKTLAEDAAWKFAKEKSIDMVTINPAMVIGPLLQPTLNTSAAAVLSLIKGAQTYPNATL--GWVNVKDVANAHIQAFEVPSASGRYCLVERVLHYSKLVNTVHELYPTFELPEKCADDKPYVPTYQVSKEKAKNLGIEF-IPLEVSLKETIESLKEKG 813
            ++++ SC K  ++K++V TSS   V  NG+ +   V  DE+ +SD +     K+  W Y +SKTLAE AAW   K  +I  ++I P +V+GP +  T   S    LSLI G + + +      +V++ D+   HI  +E P A GRY          +L   + + +P + +P K       +P    S +K  + G EF   LE   K  I++ +EKG
Sbjct:  109 LSIIRSCVKAKTVKKLVFTSSAGTV--NGQEKQLHVY-DESHWSDLDFIYSKKMTAWMYFVSKTLAEKAAWDATKGNNISFISIIPTLVVGPFITSTFPPSLVTALSLITGNEAHYSIIKQGQYVHLDDLCECHIYLYENPKAKGRYICSSHDATIHQLAKIIKDKWPEYYIPTKFPGIDEELPIVSFSSKKLIDTGFEFKYNLEDMFKGAIDTCREKG 324          
BLAST of CN188487 vs. ExPASy Swiss-Prot
Match: BAN_ARATH (Leucoanthocyanidin reductase OS=Arabidopsis thaliana GN=BAN PE=1 SV=2)

HSP 1 Score: 101.679 bits (252), Expect = 5.243e-21
Identity = 71/226 (31.42%), Postives = 116/226 (51.33%), Query Frame = -3
Query:  175 VNVLNSCAKFPSIKRVVLTSSMAAVAYNGKPRTPDVVVDETWFSDPEVCKQSKLW---YVLSKTLAEDAAWKFAKEKSIDMVTINPAMVIGPLLQPTLNTSAAAVLSLIKGAQTYP---------NATLGWVNVKDVANAHIQAFEVPSASGRYCLVERVLHYSKLVNTVHELYPTFELPEKCADDKPYVPTYQVSKEKAKNLGIEF-IPLEVSLKETIESLKEKG 813
            +NVL SC K  S+KRV+ TSS AAV+ N    T  V+ +E W +D E   + K +   Y +SK LAE  AW+FAKE  I++VT+ PA++ G  L     +S +  +S I G + +          + ++ +V+V D+A AH+   E  +ASGRY          ++ + + + YP + +  +  ++   +P   +S +K  N G  F   +     + IE  + KG
Sbjct:  112 INVLKSCLKSKSVKRVIYTSSAAAVSINNLSGTGIVMNEENW-TDVEFLTEEKPFNWGYPISKVLAEKTAWEFAKENKINLVTVIPALIAGNSLLSDPPSSLSLSMSFITGKEMHVTGLKEMQKLSGSISFVHVDDLARAHLFLAEKETASGRYICCAYNTSVPEIADFLIQRYPKYNVLSE-FEEGLSIPKLTLSSQKLINEGFRFEYGINEMYDQMIEYFESKG 335          
BLAST of CN188487 vs. ExPASy Swiss-Prot
Match: DFRA_DIACA (Dihydroflavonol-4-reductase OS=Dianthus caryophyllus GN=A PE=2 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 6.848e-21
Identity = 72/219 (32.88%), Postives = 112/219 (51.14%), Query Frame = -3
Query:  175 VNVLNSCAKFPSIKRVVLTSSMAAVAYNGKPRTPDVVVDETWFSDPEVCKQSKL--W-YVLSKTLAEDAAWKFAKEKSIDMVTINPAMVIGPLLQPTLNTSAAAVLSLIKGAQT-YPNATLG-WVNVKDVANAHIQAFEVPSASGRYCLVERVLHYSKLVNTVHELYPTFELPEKCADDKPYVPTYQVSKEKAKNLGIEF-IPLEVSLKETIESLKEKG 813
            +++L SC K   ++RVV TSS   V       T   V DET +S  +  +  K+  W Y +SK LAE AAWK+A E +++ ++I P +V+GP + P++  S    LS I   ++ Y     G +V++ D+  +HI  +E P A+GRY           +   + E YP + +P K  D K  +   Q S +K  +LG EF   L+      +ES + KG
Sbjct:  125 LDILKSCVK-AKLRRVVFTSSGGTVNVEA---TQKPVYDETCWSALDFIRSVKMTGWMYFVSKILAEQAAWKYAAENNLEFISIIPPLVVGPFIMPSMPPSLITALSPITRTESHYTIIKQGQFVHLDDLCMSHIFLYENPKANGRYIASACAATIYDIAKMLREEYPEYNVPTKFKDYKEDMGQVQFSSKKLTDLGFEFKYGLKDMYTAAVESCRAKG 339          
BLAST of CN188487 vs. ExPASy Swiss-Prot
Match: DFRA_MAIZE (Dihydroflavonol-4-reductase OS=Zea mays GN=A1 PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.992e-20
Identity = 64/220 (29.09%), Postives = 117/220 (53.18%), Query Frame = -3
Query:  175 VNVLNSCAKFPSIKRVVLTSSMAAVAYNGKPRTPDVVVDETWFSDPEVCKQSKL--W-YVLSKTLAEDAAWKFAKEKSIDMVTINPAMVIGPLLQPTLNTSAAAVLSLIKGAQTYPN--ATLGWVNVKDVANAHIQAFEVPSASGRYCLVERVLHYSKLVNTVHELYPTFELPEKCADDKPYVPTYQVSKEKAKNLGIEF--IPLEVSLKETIESLKEKG 813
            ++++ +C +  +++R+V TSS   V    + R    V DE  ++D + C++ K+  W Y +SKTLAE AA  +A E  +D+VTI P +V+GP +  ++  S    L+LI G   + +    +  +++ D+ +A I  FE P+A+GRY      +    L   + + YP +++P++    +  +   + S +K ++LG  F    LE      I + +EKG
Sbjct:  113 ISIMRACKEAGTVRRIVFTSSAGTVNLEERQRP---VYDEESWTDVDFCRRVKMTGWMYFVSKTLAEKAALAYAAEHGLDLVTIIPTLVVGPFISASMPPSLITALALITGNAPHYSILKQVQLIHLDDLCDAEIFLFENPAAAGRYVCSSHDVTIHGLAAMLRDRYPEYDVPQRFPGIQDDLQPVRFSSKKLQDLGFTFRYKTLEDMFDAAIRTCQEKG 329          
BLAST of CN188487 vs. ExPASy Swiss-Prot
Match: DFRA_ARATH (Dihydroflavonol-4-reductase OS=Arabidopsis thaliana GN=DFRA PE=2 SV=2)

HSP 1 Score: 98.2117 bits (243), Expect = 5.797e-20
Identity = 66/219 (30.14%), Postives = 108/219 (49.32%), Query Frame = -3
Query:  175 VNVLNSCAKFPSIKRVVLTSSMAAVAYNGKPRTPDVVVDETWFSDPEVCKQSKL--W-YVLSKTLAEDAAWKFAKEKSIDMVTINPAMVIGPLLQPTLNTSAAAVLS-LIKGAQTYPNATLG-WVNVKDVANAHIQAFEVPSASGRYCLVERVLHYSKLVNTVHELYPTFELPEKCADDKPYVPTYQVSKEKAKNLGIEF-IPLEVSLKETIESLKEKG 813
            + ++ +C K  +++R V TSS   V      +    V DE  +SD E     K+  W Y +SKTLAE AAW FA+EK +D ++I P +V+GP +  ++  S    LS + +    Y     G +V++ D+ NAHI  +E  +A GRY           +   +   YP + +P         + + + S +K  ++G  F   LE    E+IE+ ++KG
Sbjct:  108 LGIMKACVKAKTVRRFVFTSSAGTVNVEEHQKN---VYDENDWSDLEFIMSKKMTGWMYFVSKTLAEKAAWDFAEEKGLDFISIIPTLVVGPFITTSMPPSLITALSPITRNEAHYSIIRQGQYVHLDDLCNAHIFLYEQAAAKGRYICSSHDATILTISKFLRPKYPEYNVPSTFEGVDENLKSIEFSSKKLTDMGFNFKYSLEEMFIESIETCRQKG 323          
BLAST of CN188487 vs. ExPASy Swiss-Prot
Match: DFRA_PETHY (Dihydroflavonol-4-reductase OS=Petunia hybrida GN=DFRA PE=2 SV=2)

HSP 1 Score: 97.8265 bits (242), Expect = 7.571e-20
Identity = 70/219 (31.96%), Postives = 115/219 (52.51%), Query Frame = -3
Query:  178 VNVLNSCAKFPSIKRVVLTSSMAAVAYNGKPRTPDVVVDETWFSDPEVCKQSKL--W-YVLSKTLAEDAAWKFAKEKSIDMVTINPAMVIGPLLQPTLNTSAAAVLSLIKGAQT-YPNATLG-WVNVKDVANAHIQAFEVPSASGRY-CLVERVLHYSKLVNTVHELYPTFELPEKCADDKPYVPTYQVSKEKAKNLGIEF-IPLEVSLKETIESLKEK 813
            ++++ SCAK  ++KR+V TSS   +    + +   +  D+T +SD +     K+  W Y  SK LAE AA + AK+K+ID ++I P +V+GP + PT   S    LSLI G +  Y     G +V++ D+  AHI  +E P A GR+ C     + Y  +   V E +P + +P +       +P    S +K  ++G +F   LE   K  I++ ++K
Sbjct:  118 LSIIESCAKANTVKRLVFTSSAGTLDVQEQQK---LFYDQTSWSDLDFIYAKKMTGWMYFASKILAEKAAMEEAKKKNIDFISIIPPLVVGPFITPTFPPSLITALSLITGNEAHYCIIKQGQYVHLDDLCEAHIFLYEHPKADGRFICSSHHAIIYD-VAKMVREKWPEYYVPTEFKGIDKDLPVVSFSSKKLTDMGFQFKYTLEDMYKGAIDTCRQK 332          
The following BLAST results are available for this feature:
BLAST of CN188487 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 19
Match NameE-valueIdentityDescription
DFRA_CALCH9.234e-2634.70Dihydroflavonol-4-reductase OS=Callistephus chinen... [more]
DFRA_VITVI4.583e-2533.79Dihydroflavonol-4-reductase OS=Vitis vinifera GN=D... [more]
DFRA_MALDO5.985e-2533.33Bifunctional dihydroflavonol 4-reductase/flavanone... [more]
DFRA_PYRCO1.741e-2432.88Bifunctional dihydroflavonol 4-reductase/flavanone... [more]
DFRA_GERHY1.802e-2131.51Dihydroflavonol-4-reductase OS=Gerbera hybrida GN=... [more]
BAN_ARATH5.243e-2131.42Leucoanthocyanidin reductase OS=Arabidopsis thalia... [more]
DFRA_DIACA6.848e-2132.88Dihydroflavonol-4-reductase OS=Dianthus caryophyll... [more]
DFRA_MAIZE1.992e-2029.09Dihydroflavonol-4-reductase OS=Zea mays GN=A1 PE=3... [more]
DFRA_ARATH5.797e-2030.14Dihydroflavonol-4-reductase OS=Arabidopsis thalian... [more]
DFRA_PETHY7.571e-2031.96Dihydroflavonol-4-reductase OS=Petunia hybrida GN=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0006C08_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0006C08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188487 ID=CN188487; Name=CN188487; organism=Citrus sinensis; type=EST; length=818bp
CCTTTTGCTATGGAATTAATTGAAGCGAGAAAGTAGCATCATATTCTGAA
TCCATTAATAGCGGTAGTAACAAATTGAACGTTTGATCACACCAAAAGCC
ATGAGTCAGAACCGTTTATTTATGATAACGTATGAGGCTGTGAAAGAGCT
ACTCACGACTCAAAAATCAACAAACCCCTTCTCCTTTAGAGATTCAATGG
TTTCCTTGAGGCTGACCTCTAATGGGATGAACTCAATACCCAAGTTTTTC
GCTTTTTCCTTCGAAACCTGATATGTAGGAACATATGGCTTGTCGTCCGC
ACACTTTTCTGGAAGCTCAAAAGTAGGGTAAAGCTCGTGTACAGTGTTCA
CGAGTTTTGAATAGTGTAAAACTCTTTCAACTAAACAATATCGTCCACTG
GCAGATGGAACTTCAAATGCTTGAATATGTGCATTAGCAACATCTTTAAC
GTTAACCCATCCTAAAGTCGCATTTGGGTAAGTTTGTGCTCCTTTAATTA
AGCTTAGAACAGCAGCAGCACTTGTATTAAGTGTTGGCTGTAAGAGAGGA
CCGATAACCATTGCTGGGTTAATGGTGACCATGTCAATACTCTTCTCCTT
TGCAAATTTCCAAGCCGCATCCTCAGCCAATGTCTTTGAAAGCACATACC
AAAGCTTTGATTGCTTGCAAACCTCTGGATCCGAGAACCAAGTCTCATCA
ACTACCACATCAGGGGTTCGAGGTTTTCCGTTGTATGCAACTGCAGCCAT
TGAAGATGTTAAAACCACTCGTTTGATAGAAGGGAACTTTGCACATGAGT
TAAGAACATTAACAGTTC
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