CN188437
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188437 vs. ExPASy Swiss-Prot
Match: PR1B4_ARATH (PRA1 family protein B4 OS=Arabidopsis thaliana GN=PRA1B4 PE=1 SV=1) HSP 1 Score: 248.825 bits (634), Expect = 1.593e-65 Identity = 123/196 (62.76%), Postives = 150/196 (76.53%), Query Frame = 1 Query: 28 MISASPPVLPIXXXXXXXXXXXXXXXXXXXPVATPAFRALINHISDSLRYGFAQRRPWAELADRSGFSKPESSSEATLRIRKNYSYFRVNYLTXXXXXXXFSLITNPFSLLMLVGLLASWIFLYLFRPSDQPLVVFGRTFSERETLGVLIVLSIFVFFLTSVGSILISAVMVGAGLNCAHGAFRVPEDLFLDEQEP 615 M S++PPVLPI P+ATPAFR IN I+++++ G ++RRPWAELADRS SKPES S+A +RIRKNYSYF+VNYLT FSL+T+PFSL+ L+ LLASW+FLYLFRP+DQP+V+FGRTFS+RETLG LI+ SIFV FLT VGS+L+SA+M+G L CAHGAFR PEDLFLDEQEP Sbjct: 1 MASSAPPVLPISNPQTVPSAAPSSVESQP-PIATPAFRNFINQITETVKNGLSKRRPWAELADRSALSKPESISDAAVRIRKNYSYFKVNYLTVATAIVGFSLVTHPFSLVFLLCLLASWLFLYLFRPTDQPIVLFGRTFSDRETLGCLILFSIFVIFLTDVGSVLVSAMMIGVALICAHGAFRAPEDLFLDEQEP 195
BLAST of CN188437 vs. ExPASy Swiss-Prot
Match: PR1B3_ARATH (PRA1 family protein B3 OS=Arabidopsis thaliana GN=PRA1B3 PE=1 SV=1) HSP 1 Score: 222.631 bits (566), Expect = 1.223e-57 Identity = 111/193 (57.51%), Postives = 139/193 (72.02%), Query Frame = 1 Query: 37 ASPPVLPIXXXXXXXXXXXXXXXXXXXPVATPAFRALINHISDSLRYGFAQRRPWAELADRSGFSKPESSSEATLRIRKNYSYFRVNYLTXXXXXXXFSLITNPFSLLMLVGLLASWIFLYLFRPSDQPLVVFGRTFSERETLGVLIVLSIFVFFLTSVGSILISAVMVGAGLNCAHGAFRVPEDLFLDEQEP 615 A+PP LPI PV+TPAFR ++ +S S+R +QRRPW EL DRS S+PES ++A RIR+N YF+VNY+T SL+++PFSLL+L+ L +WIFLYLFRPSDQPLVV GRTFS+RETLGVL++L+I V FLTSVGS+L SA+M+G G+ C HGAFRVPEDLFLD+QEP Sbjct: 3 ANPPTLPISDHSGGGSQSQQ-------PVSTPAFRTFLSRLSSSIRQSLSQRRPWLELVDRSAISRPESLTDAYSRIRRNLPYFKVNYVTIVSLVLALSLLSHPFSLLVLLCLFCAWIFLYLFRPSDQPLVVLGRTFSDRETLGVLVILTIVVVFLTSVGSLLTSALMIGFGIVCLHGAFRVPEDLFLDDQEP 188
BLAST of CN188437 vs. ExPASy Swiss-Prot
Match: PR1B1_ARATH (PRA1 family protein B1 OS=Arabidopsis thaliana GN=PRA1B1 PE=1 SV=1) HSP 1 Score: 212.616 bits (540), Expect = 1.265e-54 Identity = 105/193 (54.40%), Postives = 134/193 (69.43%), Query Frame = 1 Query: 37 ASPPVLPIXXXXXXXXXXXXXXXXXXXPVATPAFRALINHISDSLRYGFAQRRPWAELADRSGFSKPESSSEATLRIRKNYSYFRVNYLTXXXXXXXFSLITNPFSLLMLVGLLASWIFLYLFRPSDQPLVVFGRTFSERETLGVLIVLSIFVFFLTSVGSILISAVMVGAGLNCAHGAFRVPEDLFLDEQEP 615 A+PP LP+ P+ TPAFR + +S S+R G +QRRPW EL DRS ++PES ++A RIRKN +YF+VNY+ FSL ++P SLL+L+GLL W+FLYLFRPSDQPLVVFGRTFS+RETL L++ +I V F+TSVGS+L SA+M+G + C HGAF VP+DLFLDEQEP Sbjct: 2 ATPPTLPVTNQQAVQSQP---------PINTPAFRTFFSRLSTSIRDGLSQRRPWTELIDRSSMARPESLTDALSRIRKNLAYFKVNYVAIVSLVLAFSLFSHPLSLLVLIGLLGGWMFLYLFRPSDQPLVVFGRTFSDRETLLALVLSTIVVVFMTSVGSLLTSALMIGVAIVCVHGAFVVPDDLFLDEQEP 185
BLAST of CN188437 vs. ExPASy Swiss-Prot
Match: PR1B5_ARATH (PRA1 family protein B5 OS=Arabidopsis thaliana GN=PRA1B5 PE=1 SV=1) HSP 1 Score: 202.216 bits (513), Expect = 1.710e-51 Identity = 104/202 (51.49%), Postives = 136/202 (67.33%), Query Frame = 1 Query: 28 MISASPPVLPIXXXXXXXXXXXXXXXXXXXPVAT-------PAFRALINHISDSLRYGFAQRRPWAELADRSGFSKPESSSEATLRIRKNYSYFRVNYLTXXXXXXXFSLITNPFSLLMLVGLLASWIFLYLFRPSDQPLVVFGRTFSERETLGVLIVLSIFVFFLTSVGSILISAVMVGAGLNCAHGAFRVPEDLFLDEQE 612 M+S +PPVLPI P+ T P RA +N +++++ G ++ RPW+EL DRS F+KP+S SEA R RKN SYFRVNY+ FSL+ +PFSL++L+ L ASW+FLYLFRPSD+PL++FGR+FSE ETLG LI+ +I V F TSVGS+LISA+M+G C HGAFR P+DLFLDEQ+ Sbjct: 1 MVSTNPPVLPISTTATDTTNQP--------PIVTAVVESQPPVVRAFVNGVTETVCGGLSRSRPWSELLDRSAFTKPDSLSEAGTRFRKNSSYFRVNYVCIVALILGFSLLAHPFSLILLLCLAASWLFLYLFRPSDRPLILFGRSFSEYETLGGLILSTIAVIFFTSVGSVLISALMIGIATICVHGAFRAPDDLFLDEQD 194
BLAST of CN188437 vs. ExPASy Swiss-Prot
Match: PR1B2_ARATH (PRA1 family protein B2 OS=Arabidopsis thaliana GN=PRA1B2 PE=1 SV=1) HSP 1 Score: 201.06 bits (510), Expect = 3.809e-51 Identity = 100/195 (51.28%), Postives = 136/195 (69.74%), Query Frame = 1 Query: 31 ISASPPVLPIXXXXXXXXXXXXXXXXXXXPVATPAFRALINHISDSLRYGFAQRRPWAELADRSGFSKPESSSEATLRIRKNYSYFRVNYLTXXXXXXXFSLITNPFSLLMLVGLLASWIFLYLFRPSDQPLVVFGRTFSERETLGVLIVLSIFVFFLTSVGSILISAVMVGAGLNCAHGAFRVPEDLFLDEQEP 615 +S+SP +LP+ P+ + AFR ++ +S SLR +QRRPW EL DRS F++P+S +++ RIRKN +YF+VNY FSL+++PFSLL+L+ LL SW+FLYLFR SDQPLV+FGR+FS+RETL L++ +I V F+TSVGS+L SA+ +G + C HGAFRVP+DLFLDEQEP Sbjct: 1 MSSSPAILPVTNQQAATQSQP--------PINSHAFRTFLSRLSSSLRESLSQRRPWLELVDRSSFARPDSLTDSFSRIRKNLAYFKVNYSAIVSLVLAFSLLSHPFSLLVLLSLLGSWMFLYLFRSSDQPLVLFGRSFSDRETLLGLVLTTIVVVFMTSVGSLLTSALTIGIAIVCLHGAFRVPDDLFLDEQEP 187
BLAST of CN188437 vs. ExPASy Swiss-Prot
Match: PR1B6_ARATH (PRA1 family protein B6 OS=Arabidopsis thaliana GN=PRA1B6 PE=1 SV=1) HSP 1 Score: 186.808 bits (473), Expect = 7.434e-47 Identity = 90/165 (54.55%), Postives = 118/165 (71.52%), Query Frame = 1 Query: 118 PVATPAFRALINHISDSLRYGFAQRRPWAELADRSGFSKPESSSEATLRIRKNYSYFRVNYLTXXXXXXXFSLITNPFSLLMLVGLLASWIFLYLFRPSDQPLVVFGRTFSERETLGVLIVLSIFVFFLTSVGSILISAVMVGAGLNCAHGAFRVPEDLFLDEQE 612 P + R L++ + ++R+ A RPWAEL DRS FS+P S SEAT R+RKN+SYFR NY+T SL+T+PF+L +L L ASW+FLY FRP+DQPLV+ GRTFS+ ETLG+L + ++ V F+TSVGS+L+S + VG HGAFR PEDLFL+EQE Sbjct: 20 PQLLSSLRVLLSRVLATVRHASADARPWAELVDRSAFSRPPSLSEATSRVRKNFSYFRANYITLVAILLAASLLTHPFALFLLASLAASWLFLYFFRPADQPLVIGGRTFSDLETLGILCLSTVVVMFMTSVGSLLMSTLAVGIMGVAIHGAFRAPEDLFLEEQE 184
BLAST of CN188437 vs. ExPASy Swiss-Prot
Match: PR1F1_ARATH (PRA1 family protein F1 OS=Arabidopsis thaliana GN=PRA1F1 PE=1 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.155e-23 Identity = 60/161 (37.27%), Postives = 84/161 (52.17%), Query Frame = 1 Query: 130 PAFRALINHISDSLRYGFAQRRPWAELADRSGFSKPESSSEATLRIRKNYSYFRVNYLTXXXXXXXFSLITNPFSLLMLVGLLASWIFLYLFRPSDQPLVVFGRTFSERETLGVLIVLSIFVFFLTSVGSILISAVMVGAGLNCAHGAFRVPEDLFLDEQE 612 P + I+ R G A RRPW ++ D F+ P + RIR N YF+ NY SLI NPFSLL+L+ LL +W+FLY R D+PL VF R R L ++ V+++ + FLT + A++ GA +H A R EDLF ++E Sbjct: 16 PKLEYITRGINQHKRSGLATRRPWKQMLDLGSFNFPRKLATVITRIRANTVYFQTNYTIVVLFSVFLSLIWNPFSLLVLLALLGAWLFLYFLR--DEPLTVFDREIDHRIVLIIMSVITLSILFLTDAKLNIAVAIVAGALAVLSHAAVRKTEDLFQTDEE 174
BLAST of CN188437 vs. ExPASy Swiss-Prot
Match: PR1F2_ARATH (PRA1 family protein F2 OS=Arabidopsis thaliana GN=PRA1F2 PE=1 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.039e-20 Identity = 56/154 (36.36%), Postives = 81/154 (52.60%), Query Frame = 1 Query: 148 INHISDSLRYGFAQRRPWAELADRSGFSKPESSSEATLRIRKNYSYFRVNYLTXXXXXXXFSLITNPFSLLMLVGLLASWIFLYLFRPSDQPLVVFGRTFSERETLGVLIVLSIFVFFLTSVGSILISAVMVGAGLNCAHGAFRVPEDLFLDEQ 609 I+ ++ G A RRPW + D + P +A RI+ N YFR NY SL+ +P SL++L L+ WIFLY R D+PLVVFG +R L L VL++ + LT S ++ +++ A L H A R ++LFLDE+ Sbjct: 22 ISRAKHRIKSGLATRRPWKSMFDFESMTLPHGFFDAISRIKTNLGYFRANYAIGVLFILFLSLLYHPTSLIVLSILVVFWIFLYFLR--DEPLVVFGYQIDDRTVLIGLSVLTVVMLLLTHATSNILGSLLTAAVLVLIHAAVRRSDNLFLDEE 173
BLAST of CN188437 vs. ExPASy Swiss-Prot
Match: PR1F3_ARATH (PRA1 family protein F3 OS=Arabidopsis thaliana GN=PRA1F3 PE=1 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 3.477e-20 Identity = 55/147 (37.41%), Postives = 79/147 (53.74%), Query Frame = 1 Query: 169 LRYGFAQRRPWAELADRSGFSKPESSSEATLRIRKNYSYFRVNYLTXXXXXXXFSLITNPFSLLMLVGLLASWIFLYLFRPSDQPLVVFGRTFSERETLGVLIVLSIFVFFLTSVGSILISAVMVGAGLNCAHGAFRVPEDLFLDEQ 609 ++ G A RR W + D P S+A RI+ N +YFR+NY FSLI +P SL++ L+ WIFLY R D+P+ +F +R L VL VL++ + LT+ ++ A++ GA L H R EDLFLDE+ Sbjct: 29 IKAGLATRRAWRVMFDFHSMGLPHGVSDAFTRIKTNLAYFRMNYAIVVLIVIFFSLIWHPTSLIVFTVLVVVWIFLYFLR--DEPIKLFRFQIDDRTVLIVLSVLTVVLLLLTNATFNIVGALVTGAVLVLIHSVVRKTEDLFLDEE 173
BLAST of CN188437 vs. ExPASy Swiss-Prot
Match: PR1F4_ARATH (PRA1 family protein F4 OS=Arabidopsis thaliana GN=PRA1F4 PE=2 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 7.747e-20 Identity = 63/167 (37.72%), Postives = 86/167 (51.50%), Query Frame = 1 Query: 124 ATPAFRALINHISDS-----LRYGFAQRRPWAELADRSGFSKPESSSEATLRIRKNYSYFRVNYLTXXXXXXXFSLITNPFSLLMLVGLLASWIFLYLFRPSDQPLVVFGRTFSERETLGVLIVLSIFVFFLTSVGSILISAVMVGAGLNCAHGAFRVPEDLFLDEQ 609 A+PA +NH S S ++ G A RR W + D P S+ RI+ N +YFR NY FSLI +P SL++ GL+ WIFLY R D PL VF +R L L V++I + LT+ +++A+M GA L H R +DLFLDE+ Sbjct: 13 ASPA----VNHESISRAKQRIKDGLATRRSWRVMFDLHSTGLPHGVSDVFSRIKTNLAYFRSNYAIVILNVIFFSLIWHPTSLIVFTGLVFLWIFLYFLR--DVPLKVFRFQIDDRAVLIGLSVITIVLLLLTNATFNIVAALMAGAVLVLIHAVIRKTDDLFLDEE 173 The following BLAST results are available for this feature:
BLAST of CN188437 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 14
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188437 ID=CN188437; Name=CN188437; organism=Citrus sinensis; type=EST; length=617bpback to top |