CN188424

Overview
NameCN188424
Unique NameCN188424
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length700
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CN188424 vs. ExPASy Swiss-Prot
Match: P1254_THEMA (Phosphorylated carbohydrates phosphatase TM_1254 OS=Thermotoga maritima GN=TM_1254 PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 9.024e-13
Identity = 45/136 (33.09%), Postives = 75/136 (55.15%), Query Frame = -1 
Query:  188 EDKEAMFRKLASEQLKPISGLDKVKKWIEDRGLKRAAVTNAPRENAELMISKLGLSDFFQVVILGDECERAKPFPDPYFKALEMLKVSKDHTFVFEDSVSGIKAGVAAGLP-VVGLT-TRNPEHVLLEANPTFLIK 589
            E+K+ +F    SE LK   G+ +  ++++ + +K A  T+ P+  A   + +L L  +F V++ GD+ +  KP P+ Y   LE L V  +   VFEDS SG++A  +AG+  + G+  + N    LLEA    L+K
Sbjct:   73 EEKKRVF----SELLKENPGVREALEFVKSKRIKLALATSTPQREALERLRRLDLEKYFDVMVFGDQVKNGKPDPEIYLLVLERLNVVPEKVVVFEDSKSGVEAAKSAGIERIYGVVHSLNDGKALLEAGAVALVK 204
The following BLAST results are available for this feature:
BLAST of CN188424 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
P1254_THEMA9.024e-1333.09Phosphorylated carbohydrates phosphatase TM_1254 O... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS05_0006A07_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0006A07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188424 ID=CN188424; Name=CN188424; organism=Citrus sinensis; type=EST; length=700bp
TTTTTTTAAGGGGTAAATTTGTCTCATGTGGACTATTATTAATCAGAATC
CTTTTATCAAATGAAACATTAACTTACAAAATCAATTAGTGCCTTATTAT
GCTGAGATGTTTAATACTTAAACTTCAAGCATCCTTATTCTTATCAAGCT
CTTCCAAAGCCGACCACAATTTTGGATCATCATAATCCTTTATTAGAAAG
GTAGGATTTGCTTCCAACAGAACGTGTTCAGGATTTCTTGTGGTTAGACC
GACAACGGGCAAACCAGCTGCTACTCCCGCTTTGATTCCTGAAACAGAGT
CCTCAAATACAAATGTGTGATCCTTTGAGACCTTGAGCATTTCAAGAGCC
TTGAAGTAGGGGTCTGGGAATGGTTTGGCGCGCTCACATTCATCCCCAAG
AATAACAACCTGAAAGAAATCTGATAGGCCAAGTTTTGAGATCATGAGTT
CAGCATTTTCTCTCGGAGCATTTGTAACAGCAGCTCGTTTCAACCCACGG
TCTTCAATCCACTTCTTCACTTTATCCAGGCCGCTTATAGGCTTCAATTG
TTCTGATGCCAATTTTCGGAACATGGCTTCCTTGTCCTCACAGAACTTCA
AGCCCCTTGGCAGATCATCAGGAAAAAGAATCTTGGCAATATCAATATTA
TGCTTGCCGGCAATATTTTCAACAAAAAAAGTCCTCCGGTATTGGAACTC
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