CN188421
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN188421 vs. ExPASy Swiss-Prot
Match: HS26M_ARATH (26.5 kDa heat shock protein, mitochondrial OS=Arabidopsis thaliana GN=HSP26.5 PE=2 SV=1) HSP 1 Score: 173.711 bits (439), Expect = 8.229e-43 Identity = 92/174 (52.87%), Postives = 111/174 (63.79%), Query Frame = 1 Query: 196 RGSVATAANDEKKQDREVAVTEKXXXXXXXXXXXXXXXXXNND------IPVLAEFFPSGLGNALMQATENINRIFENLNFGPSQLMGRVKEQDDCYKLRYDVPGLGKDDVKITIHDGVLTIKG--XXXXXXXXXXXXXXWSARSYGYYNTSLALPDDAKADEIKAELKNGVLN 693 R +A E K + EV+V+EK N P L EFFP +GN L+QATEN+NRIF+N N P QLMG+VKEQDDCYKLRY+VPGL K+DVKIT++DG+LTIKG WS++SYGYYNTSL+LPDDAK ++IKAELKNGVLN Sbjct: 40 RFMATSAGEQEDKMNTEVSVSEKKSPRQNFPRRRGRKSLWRNTDDHGYFTPTLNEFFPPTIGNTLIQATENMNRIFDNFNVNPFQLMGQVKEQDDCYKLRYEVPGLTKEDVKITVNDGILTIKGDHKAEEEKGSPEEDEYWSSKSYGYYNTSLSLPDDAKVEDIKAELKNGVLN 213
BLAST of CN188421 vs. ExPASy Swiss-Prot
Match: HS22C_SOYBN (Small heat shock protein, chloroplastic (Fragment) OS=Glycine max GN=HSP22 PE=2 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 7.259e-15 Identity = 41/116 (35.34%), Postives = 70/116 (60.34%), Query Frame = 1 Query: 367 ALMQATENINRIFENLNFGPSQLMGR--------VKEQDDCYKLRYDVPGLGKDDVKITIHDGVLTIKGXXXXXXXXXXXXXXWSARSYGYYNTSLALPDDAKADEIKAELKNGVL 690 ++ Q + ++R+FE+ P + +G +K+++ ++R+D+PGL K+DVK+++ D +L IKG WS+R+Y Y+T L LPD+ + D++KAELKNGVL Sbjct: 48 SMRQILDTMDRVFEDTMTFPGRNIGGGEIRAPWDIKDEEHEIRMRFDMPGLAKEDVKVSVEDDMLVIKGGHKSEQEHGGDDS-WSSRTYSSYDTRLKLPDNCEKDKVKAELKNGVL 162
BLAST of CN188421 vs. ExPASy Swiss-Prot
Match: HS25P_ARATH (25.3 kDa heat shock protein, chloroplastic OS=Arabidopsis thaliana GN=HSP25.3 PE=2 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 4.705e-14 Identity = 40/82 (48.78%), Postives = 52/82 (63.41%), Query Frame = 1 Query: 445 VKEQDDCYKLRYDVPGLGKDDVKITIHDGVLTIKGXXXXXXXXXXXXXXWSARSYGYYNTSLALPDDAKADEIKAELKNGVL 690 +KE++ K+R+D+PGL K+DVKI++ D VL IKG WS RS Y T L LPD+ + D+IKAELKNGVL Sbjct: 131 IKEEEHEIKMRFDMPGLSKEDVKISVEDNVLVIKG----EQKKEDSDDSWSGRSVSSYGTRLQLPDNCEKDKIKAELKNGVL 208
BLAST of CN188421 vs. ExPASy Swiss-Prot
Match: HS23M_ORYSJ (23.6 kDa heat shock protein, mitochondrial OS=Oryza sativa subsp. japonica GN=HSP23.6 PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.369e-13 Identity = 47/128 (36.72%), Postives = 70/128 (54.69%), Query Frame = 1 Query: 334 LAEFFP----SGLGNALMQATENINRIFENLNFGPSQLMGRVKEQDDCYKLRYDVPGLGKDDVKITIHDGVLTIKG----XXXXXXXXXXXXXXWSARSYGYYNTSLALPDDAKADEIKAELKNGVLN 693 L +F P G+G+AL Q E + R L G+V+E ++ Y+LR++VPGLGKDDV++ + DGVL I G W+A + Y+ L LP+DA A+ I AE+++GVL+ Sbjct: 86 LRDFVPLRLVDGIGSALSQVAETLTR----------PLTGKVREDEERYRLRFEVPGLGKDDVRVYVDDGVLAIHGEKRDVVEEDRGRDGDGECWAAAT---YHAGLLLPEDAVAEGITAEVRDGVLH 200
BLAST of CN188421 vs. ExPASy Swiss-Prot
Match: HS21C_PEA (Small heat shock protein, chloroplastic OS=Pisum sativum GN=HSP21 PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.335e-13 Identity = 39/116 (33.62%), Postives = 68/116 (58.62%), Query Frame = 1 Query: 367 ALMQATENINRIFE--------NLNFGPSQLMGRVKEQDDCYKLRYDVPGLGKDDVKITIHDGVLTIKGXXXXXXXXXXXXXXWSARSYGYYNTSLALPDDAKADEIKAELKNGVL 690 ++ Q + ++RIFE N+ G ++ +K+++ ++R+D+PG+ K+DVK+++ D VL IK WS +SY Y+T L LPD+ + +++KAELK+GVL Sbjct: 101 SMRQMLDTMDRIFEDAITIPGRNIGGGEIRVPWEIKDEEHEIRMRFDMPGVSKEDVKVSVEDDVLVIKSDHREENGGEDC---WSRKSYSCYDTRLKLPDNCEKEKVKAELKDGVL 213
BLAST of CN188421 vs. ExPASy Swiss-Prot
Match: HS22C_PETHY (Small heat shock protein, chloroplastic OS=Petunia hybrida GN=HSP22 PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.977e-12 Identity = 42/116 (36.21%), Postives = 68/116 (58.62%), Query Frame = 1 Query: 370 LMQATENINRIFEN-LNFGPSQLMGR--------VKEQDDCYKLRYDVPGLGKDDVKITIHDGVLTIKGXXXXXXXXXXXXXXWSARSYGYYNTSLALPDDAKADEIKAELKNGVL 690 + Q + ++R+FE+ + F S+ G +K+ ++ K+R+D+PGL K++VK+++ D VL IKG W R+Y Y+T L+LPD+ D++KAELKNGVL Sbjct: 110 MRQMMDTMDRLFEDTMTFPGSRNRGTGEIRAPWDIKDDENEIKMRFDMPGLSKEEVKVSVEDDVLVIKG--EHKKEESGKDDSW-GRNYSSYDTRLSLPDNVDKDKVKAELKNGVL 222
BLAST of CN188421 vs. ExPASy Swiss-Prot
Match: HS21C_SOLLC (Small heat shock protein, chloroplastic OS=Solanum lycopersicum GN=HSP21 PE=2 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 8.306e-11 Identity = 41/133 (30.83%), Postives = 67/133 (50.38%), Query Frame = 1 Query: 322 DIPVLAEFFPSGLGNALMQATENINRIFENLNFGPSQLMGR----------VKEQDDCYKLRYDVPGLGKDDVKITIHDGVLTIKGXXXXXXXXXXXXXXWSARSYGYYNTSLALPDDAKADEIKAELKNGVL 690 D+ P + Q + ++R+FE+ P + + + ++ K+R+D+PGL K+DVK+++ + +L IKG W R+Y Y+T L+LPD+ D+IKAELKNGVL Sbjct: 86 DVSPFGVLDPMSPMRTMRQMIDTMDRLFEDTMTFPGRNRASGTGEIRTPWDIHDDENEIKMRFDMPGLSKEDVKVSVENDMLVIKGEHKKEEDGRDKHS-WG-RNYSSYDTRLSLPDNVVKDKIKAELKNGVL 216 The following BLAST results are available for this feature:
BLAST of CN188421 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CN188421 ID=CN188421; Name=CN188421; organism=Citrus sinensis; type=EST; length=695bpback to top |