CN188415
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN188415 vs. ExPASy Swiss-Prot
Match: SEC13_BOVIN (Protein SEC13 homolog OS=Bos taurus GN=SEC13 PE=2 SV=1) HSP 1 Score: 160.999 bits (406), Expect = 6.149e-39 Identity = 82/161 (50.93%), Postives = 107/161 (66.46%), Query Frame = -2 Query: 274 IDQAHPVGVTSVSWAPAMAPGALVGLGLLDP---VQKLASCGCDNTVKVWKMY-NGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTC-AKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADANN-VTLWKEAVDGEWQQVSVV 738 I+ AH +G +VSWAPA+ PG+L+ ++K AS GCDN +K+WK +G WK + L+ HSDWVR VAWAP++GLP STIAS SQDG V +WTC G W ++L F VW VSWS+T N+LAV+ +N VTLWKE+VDG+W +S V Sbjct: 145 INNAHTIGCNAVSWAPAVVPGSLIDQPSGQKPNYIKKFASGGCDNLIKLWKEEEDGQWKEE--QKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFVWTCDDASGNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKESVDGQWVCISDV 303
BLAST of CN188415 vs. ExPASy Swiss-Prot
Match: SEC13_RAT (Protein SEC13 homolog OS=Rattus norvegicus GN=Sec13 PE=1 SV=1) HSP 1 Score: 160.614 bits (405), Expect = 8.030e-39 Identity = 82/161 (50.93%), Postives = 107/161 (66.46%), Query Frame = -2 Query: 274 IDQAHPVGVTSVSWAPAMAPGALVGLGLLDP---VQKLASCGCDNTVKVWKMY-NGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTC-AKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADANN-VTLWKEAVDGEWQQVSVV 738 I+ AH +G +VSWAPA+ PG+L+ ++K AS GCDN +K+W+ +G WK + L+ HSDWVR VAWAP++GLP STIAS SQDG V IWTC G W ++L F VW VSWS+T N+LAV+ +N VTLWKE+VDG+W +S V Sbjct: 145 INNAHTIGCNAVSWAPAVVPGSLIDQPSGQKPNYIKKFASGGCDNLIKLWREEEDGQWKEE--QKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASGNMWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKESVDGQWVCISDV 303
BLAST of CN188415 vs. ExPASy Swiss-Prot
Match: SEC13_MOUSE (Protein SEC13 homolog OS=Mus musculus GN=Sec13 PE=2 SV=3) HSP 1 Score: 160.614 bits (405), Expect = 8.030e-39 Identity = 82/161 (50.93%), Postives = 107/161 (66.46%), Query Frame = -2 Query: 274 IDQAHPVGVTSVSWAPAMAPGALVGLGLLDP---VQKLASCGCDNTVKVWKMY-NGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTC-AKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADANN-VTLWKEAVDGEWQQVSVV 738 I+ AH +G +VSWAPA+ PG+L+ ++K AS GCDN +K+W+ +G WK + L+ HSDWVR VAWAP++GLP STIAS SQDG V IWTC G W ++L F VW VSWS+T N+LAV+ +N VTLWKE+VDG+W +S V Sbjct: 145 INNAHTIGCNAVSWAPAVVPGSLIDQPSGQKPNYIKKFASGGCDNLIKLWREEEDGQWKEE--QKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASGNMWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKESVDGQWVCISDV 303
BLAST of CN188415 vs. ExPASy Swiss-Prot
Match: SEC13_HUMAN (Protein SEC13 homolog OS=Homo sapiens GN=SEC13 PE=1 SV=3) HSP 1 Score: 157.532 bits (397), Expect = 6.798e-38 Identity = 81/161 (50.31%), Postives = 106/161 (65.84%), Query Frame = -2 Query: 274 IDQAHPVGVTSVSWAPAMAPGALVGLGLLDP---VQKLASCGCDNTVKVWKMY-NGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTC-AKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADANN-VTLWKEAVDGEWQQVSVV 738 I+ AH +G +VSWAPA+ PG+L+ +++ AS GCDN +K+WK +G WK + L+ HSDWVR VAWAP++GLP STIAS SQDG V IWTC W ++L F VW VSWS+T N+LAV+ +N VTLWKE+VDG+W +S V Sbjct: 145 INNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEE--QKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASSNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKESVDGQWVCISDV 303
BLAST of CN188415 vs. ExPASy Swiss-Prot
Match: SEC13_DICDI (Protein transport protein SEC13 OS=Dictyostelium discoideum GN=sec13 PE=3 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 1.200e-34 Identity = 75/158 (47.47%), Postives = 101/158 (63.92%), Query Frame = -2 Query: 271 QAHPVGVTSVSWAPAMAPGALVGLG---LLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTCAKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADANN-VTLWKEAVDGEWQQVSVVE 732 Q +GV SVSW+PA P +LV + P++++ + CDN +K++K W +D L+ H DWVR VAWAPN+GLP S IAS SQD +V++WT + G W G+ L F VW VSWS+ GN+LAV+ +N VTLWKE VD EW+ +S VE Sbjct: 145 QVSQIGVNSVSWSPAAIPTSLVNSANTIIPAPIKRIVTGSCDNLIKIFKNVEDKWILD--KQLEDHKDWVRDVAWAPNIGLPYSKIASCSQDRSVIVWTQDENG-VWSGKPLPKFDDIVWRVSWSVIGNILAVSCGDNQVTLWKEGVDSEWKLISHVE 299
BLAST of CN188415 vs. ExPASy Swiss-Prot
Match: SEC13_USTMA (Protein transport protein SEC13 OS=Ustilago maydis GN=SEC13 PE=3 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 1.916e-32 Identity = 77/179 (43.02%), Postives = 102/179 (56.98%), Query Frame = -2 Query: 271 AHPVGVTSVSWAPAMAPGALVGL------------GLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTCAKEGEQWEGRVL-------------KDFKTPVWSVSWSLTGNLLAVADAN-NVTLWKEAVDGEWQQVSVVE 729 AHPVG +VSWAPA+ PG+L+ G V++ AS GCDNTVK+W+ + ALQ HSDWVR VA+APN+GLP+S +A+ASQD TV+IWT W L F VW VSWS++GN+LAV+ + +TLWKE + G W+ VS ++ Sbjct: 185 AHPVGCNAVSWAPAVVPGSLISAQSVGANAGAASNGEAKLVKRFASAGCDNTVKIWEFSQEANRFVEVEALQGHSDWVRDVAFAPNVGLPRSYLATASQDRTVLIWTQDSPTAAWSKTALNPISASAAAGAGSNKFPDTVWRVSWSVSGNVLAVSCGDGKITLWKENLKGAWECVSEMD 363
BLAST of CN188415 vs. ExPASy Swiss-Prot
Match: SEC13_MAGGR (Protein transport protein SEC13 OS=Magnaporthe grisea GN=SEC13 PE=3 SV=2) HSP 1 Score: 133.265 bits (334), Expect = 1.373e-30 Identity = 75/158 (47.47%), Postives = 96/158 (60.76%), Query Frame = -2 Query: 271 AHPVGVTSVSWAPAMAPGALVGLGLLDPVQK-LASCGCDNTVKVWKMYNGIWKMDCFPA--LQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTCAKEGEQ-WEGRVLKDFKTPVWSVSWSLTGNLLAVADANN-VTLWKEAVDGEWQQVSVVE 729 AH GV SVSWAP+ APG+++ Q+ + G DNT+K+W + C L H+DWV V W+P + L KS IASASQD TV IWT W+ RVLK+F T VW VSWSL+GN+LAV+ +N VTLWKE + GEW V+ +E Sbjct: 139 AHGQGVNSVSWAPSTAPGSIISTNATPAAQRRFVTGGSDNTLKIWSWDAASAQYRCEEGGVLSGHTDWVLDVDWSPTV-LQKSYIASASQDRTVRIWTSDSSNPGVWQSRVLKEFDTTVWRVSWSLSGNVLAVSSGDNKVTLWKENLKGEWACVNSLE 295
BLAST of CN188415 vs. ExPASy Swiss-Prot
Match: SEC13_YARLI (Protein transport protein SEC13 OS=Yarrowia lipolytica GN=SEC13 PE=3 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 8.899e-30 Identity = 75/159 (47.17%), Postives = 97/159 (61.01%), Query Frame = -2 Query: 271 AHPVGVTSVSWAPAMAPGALVGL--GLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTCAKEGEQ-WEGRVLKDFKTP--VWSVSWSLTGNLLAVADANN-VTLWKEAVDGEWQQVSVVE 729 AH VG S SWAP G+L+ G ++ + GCDN VK+WK L H DWVR VAW+ ++ L KS IASASQD TV++WT +EG Q W+ ++L+D P VW VSWSL+GN+LAV+ +N VTLWKE + GEW+ VVE Sbjct: 142 AHDVGANSASWAPPAVSGSLIQPINGKASNNIRIVTGGCDNLVKIWKYDPSSKTYVIEETLSGHKDWVRDVAWSSSV-LSKSYIASASQDKTVIVWT--QEGNQPWKKKLLQDIPFPDVVWKVSWSLSGNVLAVSGGDNKVTLWKENLTGEWESAGVVE 297
BLAST of CN188415 vs. ExPASy Swiss-Prot
Match: SEC13_EMENI (Protein transport protein sec13 OS=Emericella nidulans GN=sec13 PE=3 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 2.589e-29 Identity = 73/162 (45.06%), Postives = 102/162 (62.96%), Query Frame = -2 Query: 271 IDQAHPVGVTSVSWAPAMAPGALV----GLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTC-AKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADANN-VTLWKEAVDGEWQQVSVVE 738 I AH +GV S+SWAPA +PG+LV G+G ++ + G DN +K+W + L+ HSDWVR VAW+P++ L KS IASASQD TV +WT A QW +VL +F +W VSWS +GN+LAV+ +N V+LWKE + G+W++V +E Sbjct: 152 IFHAHGMGVNSISWAPAASPGSLVSSNPGIG---QQRRFVTGGSDNLLKIWDYNPETKTYNATQTLEGHSDWVRDVAWSPSI-LSKSYIASASQDKTVRVWTADASNPGQWTSQVL-EFDNVLWRVSWSPSGNILAVSGGDNKVSLWKENLRGQWEKVKDIE 308
BLAST of CN188415 vs. ExPASy Swiss-Prot
Match: SEC13_NEUCR (Protein transport protein sec-13 OS=Neurospora crassa GN=sec-13 PE=3 SV=2) HSP 1 Score: 128.642 bits (322), Expect = 3.382e-29 Identity = 82/166 (49.40%), Postives = 105/166 (63.25%), Query Frame = -2 Query: 271 IDQAHPVGVTSVSWAPAMAPGALV----GLGLLDPVQKLASCGCDNTVKVWKM---YNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWT--CAKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADANN-VTLWKEAVDGEWQQVSVVE 738 I AH +GV SVSWAPA PG++V G G ++ + G DN +K+W NG +K++ P L H+DWVR VAW+P + L KS IASASQD TV IWT A GE W+ +VL +F VW VSWSL+GN+LA + NN VTLWKE + GEW+ V +E Sbjct: 144 IFHAHGLGVNSVSWAPATTPGSIVSSNPGPGSTGN-RRFVTGGSDNLLKIWTFDPATNG-YKLEREP-LAGHTDWVRDVAWSPTV-LQKSYIASASQDKTVRIWTSDAANPGE-WKCKVL-NFDAAVWRVSWSLSGNVLAASSDNNKVTLWKENLKGEWENVKTIE 303 The following BLAST results are available for this feature:
BLAST of CN188415 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 31
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188415 ID=CN188415; Name=CN188415; organism=Citrus sinensis; type=EST; length=739bpback to top |