CN188398
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188398 vs. ExPASy Swiss-Prot
Match: MT3_CARPA (Metallothionein-like protein type 3 OS=Carica papaya PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 2.836e-23 Identity = 46/66 (69.70%), Postives = 55/66 (83.33%), Query Frame = -2 Query: 108 MSDTCGNCDCADRSQCVKKGSSYAADFVETDLSFVSTVVVMDVQAAEAEGNCKCGPTCACVNCTCG 305 MSDTCGNCDCAD++QCVKKGSSY AD +ET+ S ++ VVMD AAE +G CKCGP+C+C NCTCG Sbjct: 1 MSDTCGNCDCADKTQCVKKGSSYTADIIETEKSIMT--VVMDAPAAENDGKCKCGPSCSCTNCTCG 64
BLAST of CN188398 vs. ExPASy Swiss-Prot
Match: MT3_MUSAC (Metallothionein-like protein type 3 OS=Musa acuminata PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.233e-18 Identity = 39/64 (60.94%), Postives = 48/64 (75.00%), Query Frame = -2 Query: 105 TCGNCDCADRSQCVKKGSSYAADFVETDLSFVSTVVVMDVQAAEAEGNCKCGPTCACVNCTCGS 296 TCGNCDC D+SQCVKKG+SY D VET+ S+V V+V +AAE +G CKCG CAC +C CG+ Sbjct: 3 TCGNCDCVDKSQCVKKGNSYGIDIVETEKSYVDEVIVA-AEAAEHDGKCKCGAACACTDCKCGN 65
BLAST of CN188398 vs. ExPASy Swiss-Prot
Match: MT3_ACTDE (Metallothionein-like protein type 3 OS=Actinidia deliciosa GN=pKIWI503 PE=2 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.610e-18 Identity = 44/65 (67.69%), Postives = 49/65 (75.38%), Query Frame = -2 Query: 111 MSDTCGNCDCADRSQCVKKGSSYAADFVETDLSFVSTVVVMDVQAAEAEGNCKCGPTCACVNCTC 305 MSD CGNCDCAD SQCVKKG+S D VETD S++ VV M V AAE+ G CKCG +C CVNCTC Sbjct: 1 MSDKCGNCDCADSSQCVKKGNSI--DIVETDKSYIEDVV-MGVPAAESGGKCKCGTSCPCVNCTC 62
BLAST of CN188398 vs. ExPASy Swiss-Prot
Match: SYNC1_ARATH (Asparaginyl-tRNA synthetase, cytoplasmic 1 OS=Arabidopsis thaliana GN=SYNC1 PE=2 SV=1) HSP 1 Score: 62.003 bits (149), Expect = 3.875e-17 Identity = 33/58 (56.90%), Postives = 40/58 (68.97%), Query Frame = 1 Query: 478 DSRQLVQTGTCVYVEGVLAIPPVGAGIKQKIELRVKKVIDVGLV-AAEYPLSRKSTIL 648 D LV TGTCV V+GVL +PP G G +Q+IEL V KVIDVG V A++YPL + L Sbjct: 94 DVSNLVATGTCVTVDGVLKVPPKGKGTQQQIELNVVKVIDVGTVDASKYPLPKTKLTL 151 HSP 2 Score: 41.2022 bits (95), Expect = 3.875e-17 Identity = 19/32 (59.38%), Postives = 22/32 (68.75%), Query Frame = 2 Query: 371 WVKIGRKQDKDWLAFFEVNDGSCFDNLQVLVE 466 WVK GR Q K +F VNDGSC NLQV+V+ Sbjct: 58 WVKSGRDQGKRTFSFLAVNDGSCPANLQVMVD 89 HSP 3 Score: 25.409 bits (54), Expect = 3.875e-17 Identity = 12/21 (57.14%), Postives = 15/21 (71.43%), Query Frame = 3 Query: 630 KKKHNLEYLRDNIYLRPRTNT 692 K K LE LRD ++LR RTN+ Sbjct: 146 KTKLTLETLRDVLHLRSRTNS 166
BLAST of CN188398 vs. ExPASy Swiss-Prot
Match: SYNC3_ARATH (Asparaginyl-tRNA synthetase, cytoplasmic 3 OS=Arabidopsis thaliana GN=SYNC3 PE=2 SV=1) HSP 1 Score: 56.9954 bits (136), Expect = 8.410e-17 Identity = 31/53 (58.49%), Postives = 36/53 (67.92%), Query Frame = 1 Query: 478 DSRQLVQTGTCVYVEGVLAIPPVGAGIKQKIELRVKKVIDVGLV-AAEYPLSR 633 D +LV TGTCV V+GVL IPP G G+KQ IEL V+ VI VG V YPL + Sbjct: 91 DLSRLVATGTCVTVDGVLKIPPEGKGLKQSIELSVETVIAVGTVDPTTYPLPK 143 HSP 2 Score: 46.2098 bits (108), Expect = 8.410e-17 Identity = 21/32 (65.62%), Postives = 24/32 (75.00%), Query Frame = 2 Query: 371 WVKIGRKQDKDWLAFFEVNDGSCFDNLQVLVE 466 WVK GR+Q K AF EVNDGSC NLQV+V+ Sbjct: 55 WVKTGRQQGKGTFAFLEVNDGSCPANLQVMVD 86 HSP 3 Score: 24.2534 bits (51), Expect = 8.410e-17 Identity = 11/20 (55.00%), Postives = 14/20 (70.00%), Query Frame = 3 Query: 630 KKKHNLEYLRDNIYLRPRTN 689 K K E+LRD ++LR RTN Sbjct: 143 KTKLTPEFLRDVLHLRSRTN 162
BLAST of CN188398 vs. ExPASy Swiss-Prot
Match: MT3_PRUAV (Metallothionein-like protein 1 OS=Prunus avium GN=MT1 PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 4.385e-16 Identity = 38/65 (58.46%), Postives = 45/65 (69.23%), Query Frame = -2 Query: 111 MSDTCGNCDCADRSQCVKKGSSYAADFVETDLSFVSTVVVMDVQAAEAEGNCKCGPTCACVNCTC 305 MS C NCDC+D SQC KKG S+ VET+ + TV+ MD AAE GNCKCGP+CACV+C C Sbjct: 1 MSSKCSNCDCSDSSQCTKKGYSFDLVIVETENRSMDTVI-MDAPAAENGGNCKCGPSCACVDCKC 64
BLAST of CN188398 vs. ExPASy Swiss-Prot
Match: MT3_MALDO (Metallothionein-like protein type 3 OS=Malus domestica GN=MT2 PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 4.385e-16 Identity = 39/66 (59.09%), Postives = 46/66 (69.70%), Query Frame = -2 Query: 108 MSDTCGNCDCADRSQCVKKGSSYAADFVETDLSFVSTVVVMDVQAAEAEGNCKCGPTCACVNCTCG 305 MS C NCDCAD +QCVKKG+SY VET+ + TV V D AAE +G CKCG C+CV+CTCG Sbjct: 1 MSGKCDNCDCADSTQCVKKGNSYDLVIVETENRSMDTVFV-DAPAAEHDGKCKCGTGCSCVSCTCG 65
BLAST of CN188398 vs. ExPASy Swiss-Prot
Match: MT3A_ORYSJ (Metallothionein-like protein 3A OS=Oryza sativa subsp. japonica GN=MT3A PE=2 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.666e-15 Identity = 36/66 (54.55%), Postives = 43/66 (65.15%), Query Frame = -2 Query: 108 MSDTCGNCDCADRSQCVKKGSSYAADFVETDLSFVSTVVVMDVQAAEAEGNCKCGPTCACVNCTCG 305 MSD CGNCDCAD+SQCVKKG+SY VE + S +V A E G CKCG +C+C +C CG Sbjct: 1 MSDKCGNCDCADKSQCVKKGTSYGVVIVEAEKSHFE-----EVAAGEENGGCKCGTSCSCTDCKCG 61
BLAST of CN188398 vs. ExPASy Swiss-Prot
Match: MT3A_ORYSI (Metallothionein-like protein 3A OS=Oryza sativa subsp. indica GN=MT3A PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.666e-15 Identity = 36/66 (54.55%), Postives = 43/66 (65.15%), Query Frame = -2 Query: 108 MSDTCGNCDCADRSQCVKKGSSYAADFVETDLSFVSTVVVMDVQAAEAEGNCKCGPTCACVNCTCG 305 MSD CGNCDCAD+SQCVKKG+SY VE + S +V A E G CKCG +C+C +C CG Sbjct: 1 MSDKCGNCDCADKSQCVKKGTSYGVVIVEAEKSHFE-----EVAAGEENGGCKCGTSCSCTDCKCG 61
BLAST of CN188398 vs. ExPASy Swiss-Prot
Match: MT3B_ORYSJ (Metallothionein-like protein 3B OS=Oryza sativa subsp. japonica GN=MT3B PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.660e-13 Identity = 33/66 (50.00%), Postives = 41/66 (62.12%), Query Frame = -2 Query: 108 MSDTCGNCDCADRSQCVKKGSSYAADFVETDLSFVSTVVVMDVQAAEAEGNCKCGPTCACVNCTCG 305 MSD CGNCDCAD+SQCVKKG+SY V+ + S + +V E +G CKC C+C C CG Sbjct: 1 MSDKCGNCDCADKSQCVKKGTSYGVVIVDAEKSHFE--MAEEVGYEENDGKCKCTTGCSCAGCNCG 64 The following BLAST results are available for this feature:
BLAST of CN188398 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 11
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188398 ID=CN188398; Name=CN188398; organism=Citrus sinensis; type=EST; length=750bpback to top |