CN188396
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN188396 vs. ExPASy Swiss-Prot
Match: LTAA_AERJA (L-allo-threonine aldolase OS=Aeromonas jandaei GN=ltaA PE=1 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 2.160e-26 Identity = 69/156 (44.23%), Postives = 98/156 (62.82%), Query Frame = -3 Query: 294 VRRLVQAADSASVCLSKGLGAPVGSVIVGSKEFIKKARRLRKTLGGGMRQXXXXXXXXXXXLQENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYFEITEDSKLDAACLLKKLEEHGVLVMPESSTRVRIVVHHQISASDVHYTLSCF 761 VR LV DS S+CLSKGLGAPVGS++VGS FI +ARRLRK +GGGMRQ LQ++V+ + D DH++A+ LAEGL L G+R+D+ V+TN+V+ ++T ++A LL ++ G+L +R+V H QI D+ + F Sbjct: 183 VRELVAPFDSVSICLSKGLGAPVGSLLVGSHAFIARARRLRKMVGGGMRQAGILAQAGLFALQQHVVRLAD-DHRRARQLAEGLAALPGIRLDLAQVQTNMVFLQLTSG---ESAPLLAFMKARGILF--SGYGELRLVTHLQIHDDDIEEVIDAF 332
BLAST of CN188396 vs. ExPASy Swiss-Prot
Match: LTAE_ECO57 (Low specificity L-threonine aldolase OS=Escherichia coli O157:H7 GN=ltaE PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.188e-16 Identity = 56/145 (38.62%), Postives = 84/145 (57.93%), Query Frame = -3 Query: 327 VRRLVQAADSASVCLSKGLGAPVGSVIVGSKEFIKKARRLRKTLGGGMRQXXXXXXXXXXXLQENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYFEITEDSKLDAACLLKKLEEHGVLVMPESSTRVRIVVHHQIS 761 ++ L Q DS ++CLSKGLG PVGS++VG++++IK+A R RK GGGMRQ L+ NV L DH A +AE QL+ DV +TN+++ + E+ +AA L + ++ VL+ +S VR+V H +S Sbjct: 181 LKELTQYCDSFTICLSKGLGTPVGSLLVGNRDYIKRAIRWRKMTGGGMRQSGILAAAGMYALKNNV-ARLQEDHDNAAWMAE---QLREAGADVMRQDTNMLFVRVGEE---NAAALGEYMKARNVLI--NASPIVRLVTHLDVS 316
BLAST of CN188396 vs. ExPASy Swiss-Prot
Match: LTAE_ECOLI (Low specificity L-threonine aldolase OS=Escherichia coli (strain K12) GN=ltaE PE=1 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 2.027e-16 Identity = 55/145 (37.93%), Postives = 84/145 (57.93%), Query Frame = -3 Query: 327 VRRLVQAADSASVCLSKGLGAPVGSVIVGSKEFIKKARRLRKTLGGGMRQXXXXXXXXXXXLQENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYFEITEDSKLDAACLLKKLEEHGVLVMPESSTRVRIVVHHQIS 761 ++ + Q DS ++CLSKGLG PVGS++VG++++IK+A R RK GGGMRQ L+ NV L DH A +AE QL+ DV +TN+++ + E+ +AA L + ++ VL+ +S VR+V H +S Sbjct: 181 LKEITQYCDSFTICLSKGLGTPVGSLLVGNRDYIKRAIRWRKMTGGGMRQSGILAAAGIYALKNNV-ARLQEDHDNAAWMAE---QLREAGADVMRQDTNMLFVRVGEE---NAAALGEYMKARNVLI--NASPIVRLVTHLDVS 316
BLAST of CN188396 vs. ExPASy Swiss-Prot
Match: YF64_CAEEL (Uncharacterized protein R102.4 OS=Caenorhabditis elegans GN=R102.4 PE=2 SV=3) HSP 1 Score: 82.0333 bits (201), Expect = 3.822e-15 Identity = 51/161 (31.68%), Postives = 84/161 (52.17%), Query Frame = -3 Query: 288 VRRLVQAADSASVCLSKGLGAPVGSVIVGSKEFIKKARRLRKTLGGGMRQXXXXXXXXXXXLQENVLVMLDGDHKKAKLLAEGLNQL--KGLRVDVDAVETNIVYFEITE-DSKLDAACLLKKLEEHGVLVMPESSTRVRIVVHHQISASDVHYTLSCFQK 761 V ++ AD+ +C SKGLGAPVGS++VG K+FI +AR RK LGGG RQ L ++ + DH++AK LA +N + R V A E +I + + + L ++H +L M + R+R+V++ +S ++ + ++K Sbjct: 249 VSKIASFADTVQMCFSKGLGAPVGSIVVGPKDFIDRARHSRKALGGGWRQSGILAAAAHIAL-DHADATIRADHERAKTLARMINDATPEEFRTKVFAAEKDITNMVLVHCQNGVTVQQLTDFFQKHDILAMTFDARRIRMVLNWNVSDENLETIVEVYKK 408
BLAST of CN188396 vs. ExPASy Swiss-Prot
Match: GLY1_ASHGO (Threonine aldolase OS=Ashbya gossypii GN=GLY1 PE=3 SV=2) HSP 1 Score: 73.559 bits (179), Expect = 1.359e-12 Identity = 54/164 (32.93%), Postives = 85/164 (51.83%), Query Frame = -3 Query: 258 DSASVCLSKGLGAPVGSVIVGSKEFIKKARRLRKTLGGGMRQXXXXXXXXXXXLQENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYFEITEDSKLDAACLLKKLEEHGVLVMPESSTRVRIVVHHQISASDV----HYTLSCFQKIYAGVCEENG 737 DS S+CLSK +GAP+GS++VGS +FIKKA RK GGG+RQ +Q + + H+ A LA + G+ ++ A +TN V+ ++ + SK++ L+KK ++G +M R+ H+QIS + L F+ +ENG Sbjct: 206 DSISICLSKSMGAPMGSILVGSHKFIKKANHFRKQQGGGVRQSGMMCKMAMVAIQGDWKGKMRRSHRMAHELARFCAE-HGIPLESPA-DTNFVFLDL-QKSKMNPDVLVKKSLKYGCKLMGG-----RVSFHYQISEESLEKIKQAILEAFEYSKKNPYDENG 361
BLAST of CN188396 vs. ExPASy Swiss-Prot
Match: GLY1_SCHPO (Probable threonine aldolase OS=Schizosaccharomyces pombe GN=gly1 PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 5.166e-12 Identity = 52/141 (36.88%), Postives = 77/141 (54.61%), Query Frame = -3 Query: 315 DSASVCLSKGLGAPVGSVIVGSKEFIKKARRLRKTLGGGMRQXXXXXXXXXXXLQENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYFEITEDSKLDAACLLKKLEEHGVLVMPESSTRVRIVVHHQISASDV 737 DS S+CLSKGL APVGS+IVG ++FI KA+ RK GGG+RQ +Q N +L HK A +AE L G+ ++V ++N+V + ++ A L + ++ G+++M RIV H QI+ V Sbjct: 218 DSVSLCLSKGLAAPVGSIIVGPRDFIAKAKWFRKAYGGGLRQSGMLAAAGLYSIQHN-FPLLKQVHKYAIEVAEYAESL-GIELEV-PTQSNMVTL-----ANINVAILCDEAKKSGIILMGP-----RIVFHIQITPDAV 345
BLAST of CN188396 vs. ExPASy Swiss-Prot
Match: GLY1_YEAST (Low specificity L-threonine aldolase OS=Saccharomyces cerevisiae GN=GLY1 PE=1 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.963e-11 Identity = 47/137 (34.31%), Postives = 76/137 (55.47%), Query Frame = -3 Query: 327 DSASVCLSKGLGAPVGSVIVGSKEFIKKARRLRKTLGGGMRQXXXXXXXXXXXLQENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYFEITEDSKLDAACLLKKLEEHGVLVMPESSTRVRIVVHHQIS 737 DS S+CLSK +GAP+GSV+VG+ +F+KKA RK GGG+RQ + + L H A LAE + KG+ ++ A +TN V+ + + +++D L+KK ++ V +M R+ H+Q++ Sbjct: 205 DSISICLSKSMGAPIGSVLVGNLKFVKKATHFRKQQGGGIRQSGMMARIALVNINNDWKSQLLYSHSLAHELAE-YCEAKGIPLESPA-DTNFVFINL-KAARMDPDVLVKKGLKYNVKLMGG-----RVSFHYQVT 333
BLAST of CN188396 vs. ExPASy Swiss-Prot
Match: GLY1_CANAL (Threonine aldolase OS=Candida albicans GN=GLY1 PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 4.373e-11 Identity = 49/147 (33.33%), Postives = 76/147 (51.70%), Query Frame = -3 Query: 297 DSASVCLSKGLGAPVGSVIVGSKEFIKKARRLRKTLGGGMRQXXXXXXXXXXXLQENVLVMLDGDHKKAKLLAEGLNQLKGLRVDVDAVETNIVYFEITEDSKLDAACLLKKLEEHGVLVMPESSTRVRIVVHHQISASDVHYTLSC 737 DS S+CLSK LGAP+GSV+VG ++FI+KA +K GGG+RQ + N L L+ H AK + + Q G++++ V+T++V+ ++ + +K+D +L E G RI H Q+S V C Sbjct: 205 DSVSLCLSKSLGAPIGSVLVGDEKFIRKANHFKKQSGGGIRQAGIMSAMAIHAIDYN-LSKLELSHNYAKQIGD-FCQEHGIKLE-SPVDTSLVFLDL-KANKMDP----NRLVELGRTKYNVKLMGQRIACHFQLSQESVDNVKKC 343 The following BLAST results are available for this feature:
BLAST of CN188396 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CN188396 ID=CN188396; Name=CN188396; organism=Citrus sinensis; type=EST; length=763bpback to top |