CN188391

Overview
NameCN188391
Unique NameCN188391
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length741
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CN188391_ssr18 microsatellite CN188391_ssr18:18..29. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig9478 contig Csv1_Contig9478:21..764. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN188391 vs. ExPASy Swiss-Prot
Match: M2OM_DICDI (Probable mitochondrial 2-oxoglutarate/malate carrier protein OS=Dictyostelium discoideum GN=ucpC PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 7.121e-19
Identity = 56/152 (36.84%), Postives = 79/152 (51.97%), Query Frame = 1
Query:  280 VKGFVEGGIASIVAGCSTHPLDLIKVRMQLQGENQVPSMRPALAFHANSSAVHVSAPPRLGPVGVGVRIIQQEGVSALFSGVSATVLRQTLYSTTRMGLYDVLKQKWTDPETRNMPLVRKXXXXXXXXXXXXXXXNPADVAMGRMQADGRLP 735
            +K FV GG+A +++   THP+D +KVRMQLQGE                        P+ G + + V I Q EG   L+ G+SA++LRQ  Y+TTR GLYD++K      + + +P  +K                PAD+ M RMQADG+LP
Sbjct:   25 LKQFVIGGLAGMLSSAFTHPIDSLKVRMQLQGEG-------------------TGVGPKRGALKMLVHINQTEGFFTLYKGLSASLLRQATYTTTRFGLYDLIKD-IVAKDDKPLPFTQKIMVGMLSGAGGAIVGTPADLTMVRMQADGKLP 156          
BLAST of CN188391 vs. ExPASy Swiss-Prot
Match: M2OM_MOUSE (Mitochondrial 2-oxoglutarate/malate carrier protein OS=Mus musculus GN=Slc25a11 PE=1 SV=3)

HSP 1 Score: 78.1814 bits (191), Expect = 5.281e-14
Identity = 51/149 (34.23%), Postives = 75/149 (50.34%), Query Frame = 1
Query:  289 FVEGGIASIVAGCSTHPLDLIKVRMQLQGENQVPSMRPALAFHANSSAVHVSAPPRLGPVGVGVRIIQQEGVSALFSGVSATVLRQTLYSTTRMGLYDVLKQKWTDPETRNMPLVRKXXXXXXXXXXXXXXXNPADVAMGRMQADGRLP 735
            F+ GG+A + A     PLDL+K RMQL GE    +     +FHA +S                  I++ EG+  +++G+SA +LRQ  Y+TTR+G+Y VL ++ T  +      + K                PA+VA+ RM ADGRLP
Sbjct:   25 FLFGGLAGMGATVFVQPLDLVKNRMQLSGEG-AKTREYKTSFHALTS------------------ILKTEGLKGIYTGLSAGLLRQATYTTTRLGIYTVLFERLTGADGTPPGFLLKALIGMTAGATGAFVGTPAEVALIRMTADGRLP 154          
BLAST of CN188391 vs. ExPASy Swiss-Prot
Match: M2OM_HUMAN (Mitochondrial 2-oxoglutarate/malate carrier protein OS=Homo sapiens GN=SLC25A11 PE=1 SV=3)

HSP 1 Score: 77.7962 bits (190), Expect = 6.897e-14
Identity = 51/149 (34.23%), Postives = 75/149 (50.34%), Query Frame = 1
Query:  289 FVEGGIASIVAGCSTHPLDLIKVRMQLQGENQVPSMRPALAFHANSSAVHVSAPPRLGPVGVGVRIIQQEGVSALFSGVSATVLRQTLYSTTRMGLYDVLKQKWTDPETRNMPLVRKXXXXXXXXXXXXXXXNPADVAMGRMQADGRLP 735
            F+ GG+A + A     PLDL+K RMQL GE    +     +FHA +S                  I++ EG+  +++G+SA +LRQ  Y+TTR+G+Y VL ++ T  +      + K                PA+VA+ RM ADGRLP
Sbjct:   25 FLFGGLAGMGATVFVQPLDLVKNRMQLSGEG-AKTREYKTSFHALTS------------------ILKAEGLRGIYTGLSAGLLRQATYTTTRLGIYTVLFERLTGADGTPPGFLLKAVIGMTAGATGAFVGTPAEVALIRMTADGRLP 154          
BLAST of CN188391 vs. ExPASy Swiss-Prot
Match: KMCP1_XENTR (Kidney mitochondrial carrier protein 1 OS=Xenopus tropicalis GN=slc25a30 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 9.008e-14
Identity = 55/151 (36.42%), Postives = 73/151 (48.34%), Query Frame = 1
Query:  283 KGFVEGGIASIVAGCSTHPLDLIKVRMQLQGENQVPSMRPALAFHANSSAVHVSAPPRLGPVGVGVRIIQQEGVSALFSGVSATVLRQTLYSTTRMGLYDVLKQKWTD-PETRNMPLVRKXXXXXXXXXXXXXXXNPADVAMGRMQADGRL 732
            K F+ GG+ASI A C T P+DL K R+Q+QG+          A  A    +        G +   VRI ++EGV AL+SG++  +LRQ  Y T ++G Y  LK+ + D PE     LV                 NP DV   RMQA G L
Sbjct:    7 KPFIYGGLASITAECGTFPIDLTKTRLQVQGQ----------ANDAKYKEIRYR-----GMLHAIVRIWKEEGVKALYSGIAPAMLRQASYGTIKIGTYQSLKRLFVDCPEDET--LVINVFCGVLSGVVSSCIANPTDVLKIRMQAQGSL 140          
BLAST of CN188391 vs. ExPASy Swiss-Prot
Match: KMCP1_XENLA (Kidney mitochondrial carrier protein 1 OS=Xenopus laevis GN=slc25a30 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.177e-13
Identity = 52/151 (34.44%), Postives = 73/151 (48.34%), Query Frame = 1
Query:  283 KGFVEGGIASIVAGCSTHPLDLIKVRMQLQGENQVPSMRPALAFHANSSAVHVSAPPRLGPVGVGVRIIQQEGVSALFSGVSATVLRQTLYSTTRMGLYDVLKQKWTD-PETRNMPLVRKXXXXXXXXXXXXXXXNPADVAMGRMQADGRL 732
            K F+ GG+ASI A C T P+DL K R+Q+QG+      +  + +     A+              VRI ++EGV AL+SG++  +LRQ  Y T ++G Y  LK+ + D PE     LV                 NP DV   RMQA G +
Sbjct:    7 KPFIYGGLASITAECGTFPIDLTKTRLQVQGQPNDAKYKE-IRYRGMMHAI--------------VRIWREEGVKALYSGIAPAMLRQASYGTIKIGTYQSLKRLFVDCPEDET--LVLNAFCGVLSGVVSSCIANPTDVLKIRMQAQGNV 140          
BLAST of CN188391 vs. ExPASy Swiss-Prot
Match: DIC_MOUSE (Mitochondrial dicarboxylate carrier OS=Mus musculus GN=Slc25a10 PE=2 SV=2)

HSP 1 Score: 77.0258 bits (188), Expect = 1.177e-13
Identity = 45/148 (30.41%), Postives = 69/148 (46.62%), Query Frame = 1
Query:  298 GGIASIVAGCSTHPLDLIKVRMQLQGENQVPSMRPALAFHANSSAVHVSAPPRLGPVGVGVRIIQQEGVSALFSGVSATVLRQTLYSTTRMGLYDVLKQKWTDPETRNMPLVRKXXXXXXXXXXXXXXXNPADVAMGRMQADGRLPPA 741
            GG+AS  A C THPLDL+KV +Q Q E                         +L   G+ +++++ +G  AL++G+SA++ RQ  YS TR  +Y+ ++   T      +P   K                PAD+   RMQ D +LPP+
Sbjct:   12 GGLASCGAACCTHPLDLLKVHLQTQQE------------------------VKLRMTGMALQVVRTDGFLALYNGLSASLCRQMTYSLTRFAIYETMRDYMTKDSQGPLPFYNKVLLGGISGLTGGFVGTPADLVNVRMQNDMKLPPS 135          
BLAST of CN188391 vs. ExPASy Swiss-Prot
Match: M2OM_BOVIN (Mitochondrial 2-oxoglutarate/malate carrier protein OS=Bos taurus GN=SLC25A11 PE=1 SV=3)

HSP 1 Score: 76.6406 bits (187), Expect = 1.537e-13
Identity = 51/149 (34.23%), Postives = 74/149 (49.66%), Query Frame = 1
Query:  289 FVEGGIASIVAGCSTHPLDLIKVRMQLQGENQVPSMRPALAFHANSSAVHVSAPPRLGPVGVGVRIIQQEGVSALFSGVSATVLRQTLYSTTRMGLYDVLKQKWTDPETRNMPLVRKXXXXXXXXXXXXXXXNPADVAMGRMQADGRLP 735
            F+ GG+A + A     PLDL+K RMQL GE    +     +FHA  S                  I++ EG+  +++G+SA +LRQ  Y+TTR+G+Y VL ++ T  +      + K                PA+VA+ RM ADGRLP
Sbjct:   25 FLFGGLAGMGATVFVQPLDLVKNRMQLSGEG-AKTREYKTSFHALIS------------------ILRAEGLRGIYTGLSAGLLRQATYTTTRLGIYTVLFERLTGADGTPPGFLLKAVIGMTAGATGAFVGTPAEVALIRMTADGRLP 154          
BLAST of CN188391 vs. ExPASy Swiss-Prot
Match: DIC_HUMAN (Mitochondrial dicarboxylate carrier OS=Homo sapiens GN=SLC25A10 PE=1 SV=2)

HSP 1 Score: 75.485 bits (184), Expect = 3.423e-13
Identity = 45/146 (30.82%), Postives = 68/146 (46.58%), Query Frame = 1
Query:  298 GGIASIVAGCSTHPLDLIKVRMQLQGENQVPSMRPALAFHANSSAVHVSAPPRLGPVGVGVRIIQQEGVSALFSGVSATVLRQTLYSTTRMGLYDVLKQKWTDPETRNMPLVRKXXXXXXXXXXXXXXXNPADVAMGRMQADGRLP 735
            GG+AS  A C THPLDL+KV +Q Q E                         +L   G+ +R+++ +G+ AL+SG+SA++ RQ  YS TR  +Y+ ++ +        +P   K                PAD+   RMQ D +LP
Sbjct:   13 GGLASCGAACCTHPLDLLKVHLQTQQE------------------------VKLRMTGMALRVVRTDGILALYSGLSASLCRQMTYSLTRFAIYETVRDRVAKGSQGPLPFHEKVLLGSVSGLAGGFVGTPADLVNVRMQNDVKLP 134          
BLAST of CN188391 vs. ExPASy Swiss-Prot
Match: M2OM_RAT (Mitochondrial 2-oxoglutarate/malate carrier protein OS=Rattus norvegicus GN=Slc25a11 PE=2 SV=3)

HSP 1 Score: 74.7146 bits (182), Expect = 5.839e-13
Identity = 50/149 (33.56%), Postives = 74/149 (49.66%), Query Frame = 1
Query:  289 FVEGGIASIVAGCSTHPLDLIKVRMQLQGENQVPSMRPALAFHANSSAVHVSAPPRLGPVGVGVRIIQQEGVSALFSGVSATVLRQTLYSTTRMGLYDVLKQKWTDPETRNMPLVRKXXXXXXXXXXXXXXXNPADVAMGRMQADGRLP 735
            F+ GG+A + A     PLDL+  RMQL GE    +     +FHA +S                  I++ EG+  +++G+SA +LRQ  Y+TTR+G+Y VL ++ T  +      + K                PA+VA+ RM ADGRLP
Sbjct:   25 FLFGGLAGMGATVFVQPLDLVXNRMQLSGEG-AKTREYKTSFHALTS------------------ILKAEGLRGIYTGLSAGLLRQATYTTTRLGIYTVLFERLTGADGTPPGFLLKALIGMTAGATGAFVGPPAEVALIRMTADGRLP 154          
BLAST of CN188391 vs. ExPASy Swiss-Prot
Match: KMCP1_HUMAN (Kidney mitochondrial carrier protein 1 OS=Homo sapiens GN=SLC25A30 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.301e-12
Identity = 49/147 (33.33%), Postives = 72/147 (48.98%), Query Frame = 1
Query:  283 KGFVEGGIASIVAGCSTHPLDLIKVRMQLQGENQVPSMRPALAFHANSSAVHVSAPPRLGPVGVGVRIIQQEGVSALFSGVSATVLRQTLYSTTRMGLYDVLKQKWTD-PETRNMPLVRKXXXXXXXXXXXXXXXNPADVAMGRMQA 720
            K FV GG+ASI A C T P+DL K R+Q+QG+      +  + +     A+              VRI ++EG+ AL+SG++  +LRQ  Y T ++G Y  LK+ + + PE   +P+                  NP DV   RMQA
Sbjct:    7 KPFVYGGLASITAECGTFPIDLTKTRLQIQGQTNDAKFK-EIRYRGMLHAL--------------VRIGREEGLKALYSGIAPAMLRQASYGTIKIGTYQSLKRLFIERPEDETLPI--NVICGILSGVISSTIANPTDVLKIRMQA 136          
The following BLAST results are available for this feature:
BLAST of CN188391 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 16
Match NameE-valueIdentityDescription
M2OM_DICDI7.121e-1936.84Probable mitochondrial 2-oxoglutarate/malate carri... [more]
M2OM_MOUSE5.281e-1434.23Mitochondrial 2-oxoglutarate/malate carrier protei... [more]
M2OM_HUMAN6.897e-1434.23Mitochondrial 2-oxoglutarate/malate carrier protei... [more]
KMCP1_XENTR9.008e-1436.42Kidney mitochondrial carrier protein 1 OS=Xenopus ... [more]
KMCP1_XENLA1.177e-1334.44Kidney mitochondrial carrier protein 1 OS=Xenopus ... [more]
DIC_MOUSE1.177e-1330.41Mitochondrial dicarboxylate carrier OS=Mus musculu... [more]
M2OM_BOVIN1.537e-1334.23Mitochondrial 2-oxoglutarate/malate carrier protei... [more]
DIC_HUMAN3.423e-1330.82Mitochondrial dicarboxylate carrier OS=Homo sapien... [more]
M2OM_RAT5.839e-1333.56Mitochondrial 2-oxoglutarate/malate carrier protei... [more]
KMCP1_HUMAN1.301e-1233.33Kidney mitochondrial carrier protein 1 OS=Homo sap... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0005P10_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0005P10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188391 ID=CN188391; Name=CN188391; organism=Citrus sinensis; type=EST; length=741bp
AGTGAAAGAAAAGGCTCCTTCTTCTTCTTTCTTATTATCACATTGTAGCC
GGCATATGTCTCATAGACCCATCGTCCCTCATTCTTCCTCCATAGCTTTT
GGCCTTCATTCTCATCTCCTGGTCTCCAGTGAGATGAGCTCCAATACCAA
CTGGTAACAACAACGCAACTTACAATTTTCACTGACCCACAAATTAATTC
GATCTAACATTATTTTTCATTAAATTGATCATTTCTTCTTGATTCGTTTT
CTGAAAACAAAAAAAGAATTAAAATGGGTGTGAAAGGCTTTGTTGAAGGC
GGCATTGCTTCTATTGTTGCTGGATGTTCAACGCATCCCCTTGACCTAAT
CAAGGTCCGCATGCAACTCCAGGGCGAAAACCAGGTTCCGTCTATGCGTC
CCGCTCTCGCTTTCCATGCCAACTCCTCCGCCGTCCACGTGTCTGCGCCA
CCCCGCCTGGGTCCCGTCGGCGTCGGCGTCCGTATTATTCAACAAGAAGG
AGTTTCGGCTCTCTTTTCCGGGGTCTCCGCCACGGTGCTCCGCCAGACCT
TGTACTCCACCACGCGGATGGGTCTCTACGACGTTCTCAAGCAAAAGTGG
ACTGACCCGGAAACCCGGAACATGCCGCTCGTGCGTAAGATAGCCGCCGG
GTTAATTGCTGGTGGAATAGGAGCCGCCGTCGGCAACCCCGCTGACGTGG
CAATGGGTCGCATGCAGGCTGACGGAAGGCTCCCTCCCGCG
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