CN188377
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188377 vs. ExPASy Swiss-Prot
Match: PGDH_MOUSE (15-hydroxyprostaglandin dehydrogenase [NAD+] OS=Mus musculus GN=Hpgd PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.850e-11 Identity = 48/146 (32.88%), Postives = 73/146 (50.00%), Query Frame = -2 Query: 357 LVAVIDCTQKAIGIM--QAAKKPGVIINMGSSAGLYPFYTDPIYSASKGGVVLFTRS---LTPYKSKGIRINVLCPEFVETELA------------LKAGSQLIDLMG--GFVPMDTVVKGAFELITDESKAGSCLWITNRRGMEY 737 LV+VI T + M Q + G+IINM S AGL P P+Y ASK G++ FTRS G+R+NV+CP FV+T + ++ Q+ +M G + T+ G LI D++ G+ + IT +G+ + Sbjct: 108 LVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYCASKHGIIGFTRSAAMAANLMKSGVRLNVICPGFVDTPILESIEKEENMGQYIEYKDQIKAMMKFYGVLHPSTIANGLINLIEDDALNGAIMKITASKGIHF 253
BLAST of CN188377 vs. ExPASy Swiss-Prot
Match: PGDH_CAVPO (15-hydroxyprostaglandin dehydrogenase [NAD+] OS=Cavia porcellus GN=HPGD PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 4.122e-11 Identity = 47/146 (32.19%), Postives = 71/146 (48.63%), Query Frame = -2 Query: 357 LVAVIDCTQKAIGIM--QAAKKPGVIINMGSSAGLYPFYTDPIYSASKGGVVLFTRSLTPYK---SKGIRINVLCPEFVETELA------------LKAGSQLIDLMG--GFVPMDTVVKGAFELITDESKAGSCLWITNRRGMEY 737 LV+VI T + M Q + GVIINM S AGL P P+Y ASK G++ FTRS + + G+R+N +CP FV T + ++ + D+M G + + + G LI D+ G+ + IT G+ + Sbjct: 108 LVSVISGTYLGLDYMSKQHGGEGGVIINMSSLAGLMPVAQQPVYCASKHGIIGFTRSAAMARKLMNSGVRMNAICPGFVNTSILQSIEKEENMGPYIEYTGHIKDMMKCYGILDPEMIANGLITLIEDDDLNGAIMKITTSNGIHF 253
BLAST of CN188377 vs. ExPASy Swiss-Prot
Match: PGDH_BOVIN (15-hydroxyprostaglandin dehydrogenase [NAD+] OS=Bos taurus GN=HPGD PE=2 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 9.182e-11 Identity = 47/146 (32.19%), Postives = 70/146 (47.95%), Query Frame = -2 Query: 357 LVAVIDCTQKAIGIM--QAAKKPGVIINMGSSAGLYPFYTDPIYSASKGGVVLFTRS---LTPYKSKGIRINVLCPEFVETELALKAGSQ-----LIDLMG---------GFVPMDTVVKGAFELITDESKAGSCLWITNRRGMEY 737 LV+VI T + M Q + G+ INM S AGL P P+Y ASK G+V FTRS + G+R+N +CP FV+T + + I+ MG G + + G LI D++ G+ + IT +G+ + Sbjct: 108 LVSVISGTYLGLDYMSKQNGGEGGININMSSLAGLMPVAQQPVYCASKHGIVGFTRSAAMAANLMNSGVRLNAICPGFVDTPILKSIEKEENMGKYIEYMGPIKDMMKYYGILDPSMIANGLITLIEDDALNGAIMKITTSKGIHF 253 The following BLAST results are available for this feature:
BLAST of CN188377 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CN188377 ID=CN188377; Name=CN188377; organism=Citrus sinensis; type=EST; length=738bpback to top |