CN188375

Overview
NameCN188375
Unique NameCN188375
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length769
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12302 contig Csv1_Contig12302:735..1502. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN188375 vs. ExPASy Swiss-Prot
Match: C72A1_CATRO (Secologanin synthase OS=Catharanthus roseus GN=CYP72A1 PE=2 SV=1)

HSP 1 Score: 323.168 bits (827), Expect = 9.993e-88
Identity = 148/245 (60.41%), Postives = 193/245 (78.78%), Query Frame = 3
Query:    6 TMQVFRSVHIPGWRFLPTKRNRRMKEIDKEIRASLMGIIKNREKAMKAGEAANNDLLGILMETSFREIEEHGNNKNVGFSMNDVIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNKPDYDGLNHLKIVQMILYEVLRLYPPVTMLSRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNFCSSRSKNG 740
            T+   R V+IPGW +LPTKRN+RMKEI+KEI   L  II  R KA+KAGE   +DLLG+L+E++ +EI++ GN K+ G S+NDVIEECKLFYFAGQETT VLL WT +LLSKH +WQERAR+EVLQ FG NKP+++ LNHLK V MILYEVLRLYPPV  L++ V K+TKLG+ T+PAG Q+ LP +++H++  +WG+DA+EF P RF +G++ A KN V+Y PF+ GPR+C+GQNF   ++K G
Sbjct:  239 TIDCMRDVYIPGWSYLPTKRNKRMKEINKEITDMLRFIINKRMKALKAGEPGEDDLLGVLLESNIQEIQKQGNKKDGGMSINDVIEECKLFYFAGQETTGVLLTWTTILLSKHPEWQERAREEVLQAFGKNKPEFERLNHLKYVSMILYEVLRLYPPVIDLTKIVHKDTKLGSYTIPAGTQVMLPTVMLHREKSIWGEDAMEFNPMRFVDGVANATKNNVTYLPFSWGPRVCLGQNFALLQAKLG 483          
BLAST of CN188375 vs. ExPASy Swiss-Prot
Match: C13A1_CAEEL (Putative cytochrome P450 CYP13A1 OS=Caenorhabditis elegans GN=cyp-13A1 PE=2 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 9.837e-27
Identity = 68/218 (31.19%), Postives = 109/218 (50.00%), Query Frame = 3
Query:  120 IKNREKAMKAGEAANN--DLLGILMETSFREIEEHGNNK----------NVGFSMNDVIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNKPDYDGLNHLKIVQMILYEVLRLYPPVTML-SRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNFCSSRSK 734
            IK RE+  K G       D + + ++    ++E  G N           N   +  +++ +C +F  AG +TT++ L++   LL+ H + Q++ ++EV +   N +   D L+ LK ++ +  E LRLYP      SR  ++ TKLGN+ +  G  I +    +H DP +WGDDA +FKPER+    S     +  Y PF LGPR C+G        K
Sbjct:  259 IKQREEDQKNGIEIGEPADFIDLFLDAKAEDVEHFGENNGDFSKSTTYTNRQLTTEEIVGQCTVFLIAGFDTTALSLSYATYLLATHPEIQKKLQEEVNRECPNPEVTIDQLSKLKYMECVFKEALRLYPLGAFANSRRCMRNTKLGNMKVEVGTMIQVDTWTLHTDPNIWGDDAEDFKPERWQTPNSDQIYQKSGYIPFGLGPRQCIGMRLAYMEEK 476          
BLAST of CN188375 vs. ExPASy Swiss-Prot
Match: C13B1_CAEEL (Putative cytochrome P450 cyp-13B1 OS=Caenorhabditis elegans GN=cyp-13B1 PE=2 SV=2)

HSP 1 Score: 117.472 bits (293), Expect = 8.328e-26
Identity = 71/209 (33.97%), Postives = 115/209 (55.02%), Query Frame = 3
Query:  120 IKNREKAMKAG-EAANNDLLGILMETSFREIE--EHGNNKNVGFSMNDVIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNKPDYDGLNHLKIVQMILYEVLRLYPPVTM-LSRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNFCSSRSK 734
            I+ RE+  K G E A ND + + +     ++E  E G+      +  DVI  C +F  AG +TT+  L +   LL+KH +  + A++EV  V G+    YD +  LK +  ++ E LRLYP      SR  +K T LG++ +  GV+I   ++ +H+  E+WG++A +F PER+ E    ++++ +S+ PF  GPR CVG     S +K
Sbjct:  262 IQEREENAKLGFENAENDFIDMFLNYYSEQVEDIEFGSTVEKKVTAEDVIGACFVFLLAGFDTTANSLAYASYLLAKHPEKMKLAQEEVDTVVGSENVSYDDMTKLKYLDAVVRESLRLYPVAWFACSRECVKPTTLGDIYIDKGVKIEADVMSLHRSKEIWGENADDFVPERWLE---PSSRHTMSWIPFGAGPRQCVGMRLGLSEAK 467          
BLAST of CN188375 vs. ExPASy Swiss-Prot
Match: CP3AO_SHEEP (Cytochrome P450 3A24 OS=Ovis aries GN=CYP3A24 PE=2 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 2.781e-25
Identity = 62/203 (30.54%), Postives = 114/203 (56.16%), Query Frame = 3
Query:  129 REKAMKAGEAANNDLLGILMETSFREIEEHGNNKNVGFSMNDVIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNKPD-YDGLNHLKIVQMILYEVLRLYPPVTMLSRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNFCSSRSK 734
            +E  +K  +    D L +++ +  +  +E  N+K    S  +++ +  +F FAG ETTS  L++ + +L+ H D Q++ ++E+   F N  P  YD L  ++ + M++ E LR++P    L R   K+ ++  +++P G  + +P+ ++H+DP+LW  +  EF+PERF++  +K + N   Y PF  GPR C+G  F     K
Sbjct:  257 KESRLKDNQKPRVDFLQLMINS--QNSKETDNHK--ALSDQELMAQSVIFIFAGYETTSNTLSFLLYILATHPDVQQKLQEEIDATFPNKAPPTYDVLAQMEYLDMVVNETLRMFPIAVRLDRLCKKDVEIHGVSIPKGTAVTVPIFVLHRDPQLW-PEPEEFRPERFSKK-NKDSINPYVYLPFGTGPRNCIGMRFAIMNMK 453          

HSP 2 Score: 22.3274 bits (46), Expect = 2.781e-25
Identity = 8/18 (44.44%), Postives = 13/18 (72.22%), Query Frame = 1
Query:  715 FALVEAKMATTMILQNYS 768
            FA++  K+A   +LQN+S
Sbjct:  447 FAIMNMKLAIVRVLQNFS 464          
BLAST of CN188375 vs. ExPASy Swiss-Prot
Match: CP3AT_PIG (Cytochrome P450 3A29 OS=Sus scrofa GN=CYP3A29 PE=2 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 6.130e-25
Identity = 63/191 (32.98%), Postives = 107/191 (56.02%), Query Frame = 3
Query:  168 DLLGILMET-SFREIEEHGNNKNVGFSMNDVIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNKPD-YDGLNHLKIVQMILYEVLRLYPPVTMLSRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNFCSSRSK 734
            DLL +++ + + +E++ H +  N      +++ +  +F FAG ETTS  L+     L+ H D Q++ ++E+   F N  P  YD L  ++ + M++ E LRLYP    L RA  K+ ++  + +P G  + +P+ ++H+DP+LW  +  EF+PERF++   K   N  +Y PF  GPR C+G  F     K
Sbjct:  270 DLLQLMINSQNSKEMDPHKSLSN-----EELVAQGIIFIFAGYETTSSALSLLAYELATHPDVQQKLQEEIEATFPNKAPPTYDALAQMEYLDMVVNETLRLYPIAARLERACKKDVEIHGVFVPKGTVVVVPVFVLHRDPDLW-PEPEEFRPERFSKK-HKDTINPYTYLPFGTGPRNCIGMRFALMNMK 453          

HSP 2 Score: 23.0978 bits (48), Expect = 6.130e-25
Identity = 9/18 (50.00%), Postives = 13/18 (72.22%), Query Frame = 1
Query:  715 FALVEAKMATTMILQNYS 768
            FAL+  K+A   +LQN+S
Sbjct:  447 FALMNMKLALVRVLQNFS 464          
BLAST of CN188375 vs. ExPASy Swiss-Prot
Match: C13A2_CAEEL (Putative cytochrome P450 CYP13A2 OS=Caenorhabditis elegans GN=cyp-13A2 PE=2 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 7.050e-25
Identity = 64/215 (29.77%), Postives = 118/215 (54.88%), Query Frame = 3
Query:  123 KNREKAMKAGEAANNDLLGILMETSFREIE------EHGNNKNVGF----SMNDVIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNKPDYDGLNHLKIVQMILYEVLRLYPPVTML-SRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNFCSSRSK 734
            + REK  ++GE    D + + ++    +++      E  + +N+      S ++V+ +C LF   G +TT++ L++   LL+ +   QE+  +E+ + FG ++ +++ L  LK +  ++ E LRLYP  ++  SR  +K T +  + + AGV + +    +H DPELWG+D  EFKPER++    +  +++ +Y PF LGPR C+G        K
Sbjct:  261 REREKGAESGEP--QDFIDLFLDARSDDVDFSAEAREDFSKRNLKITKELSADEVVGQCFLFLIGGFDTTALSLSYVTYLLAVNPKIQEKVIEEIAREFGTSEVEFEKLGRLKYMDCVIKEALRLYPLASISNSRKCMKTTTVNGVKIEAGVYVQMDTWSLHYDPELWGEDVKEFKPERWS--TDEPLEHKGAYLPFGLGPRQCIGMRLAIMEQK 471          
BLAST of CN188375 vs. ExPASy Swiss-Prot
Match: C13AA_CAEEL (Putative cytochrome P450 CYP13A10 OS=Caenorhabditis elegans GN=cyp-13A10 PE=2 SV=3)

HSP 1 Score: 113.62 bits (283), Expect = 1.203e-24
Identity = 68/230 (29.57%), Postives = 113/230 (49.13%), Query Frame = 3
Query:   84 IDKEIRASLMGIIKNREKAMKAGEAANN--DLLGILMETSFREIEEHGNNK----------NVGFSMNDVIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNKPDYDGLNHLKIVQMILYEVLRLYPPVTML-SRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNFCSSRSK 734
            ++K +  ++   I  RE   K G       D + + +E    ++E    N           N   +  +++ +C +F  AG +TT++ L++T  LL+ H + Q++ ++E+ +        +D L+ LK +  I+ E LRLYP  TM  SR  ++ TKLGN+ +  G  + +    +H D ++WGDDA EFKPER+ +        +  Y  F LGPR CVG        K
Sbjct:  247 VNKTVVTAVQNRIDQRENDRKNGIEIGEPQDFIDLFLEARADDVEHFQENNGDFSKTSSYGNRQLTTQEIVGQCLVFLIAGFDTTALSLSYTTFLLATHPEVQKKLQEEIERECIEPSISFDHLSKLKYMDCIIKETLRLYPLGTMANSRRCMRATKLGNVEVEVGTMVQVDTWSLHTDTKIWGDDAKEFKPERWLDPNCDQVFQKGGYISFGLGPRQCVGMRLAYMEEK 476          
BLAST of CN188375 vs. ExPASy Swiss-Prot
Match: CP3AC_CANFA (Cytochrome P450 3A12 OS=Canis familiaris GN=CYP3A12 PE=2 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 6.562e-24
Identity = 64/204 (31.37%), Postives = 108/204 (52.94%), Query Frame = 3
Query:  129 REKAMKAGEAANNDLLGILMET-SFREIEEHGNNKNVGFSMNDVIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNK-PDYDGLNHLKIVQMILYEVLRLYPPVTMLSRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNFCSSRSK 734
            +E  +K  +    D L +++ + + +E++ H        S  +++ +  +F FAG ETTS  L++ M  L+ H D Q++ ++E+   F N   P YD L  ++ + M+L E LRLYP    L R   K+ ++  + +P G  + +P   +H+D  LW  +  EF+PERF+   +K + N  +Y PF  GPR C+G  F     K
Sbjct:  257 KESRLKDKQKHRVDFLQLMINSQNSKEMDTHK-----ALSDLELVAQSIIFIFAGYETTSTSLSFLMYELATHPDVQQKLQEEIDATFPNKALPTYDALVQMEYLDMVLNETLRLYPIAGRLERVCKKDVEISGVFIPKGTVVMVPTFTLHRDQSLW-PEPEEFRPERFSRK-NKDSINPYTYLPFGTGPRNCIGMRFAIMNMK 453          

HSP 2 Score: 22.3274 bits (46), Expect = 6.562e-24
Identity = 8/18 (44.44%), Postives = 13/18 (72.22%), Query Frame = 1
Query:  715 FALVEAKMATTMILQNYS 768
            FA++  K+A   +LQN+S
Sbjct:  447 FAIMNMKLALVRVLQNFS 464          
BLAST of CN188375 vs. ExPASy Swiss-Prot
Match: CP3AS_BOVIN (Cytochrome P450 3A28 OS=Bos taurus GN=CYP3A28 PE=2 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 1.446e-23
Identity = 60/200 (30.00%), Postives = 111/200 (55.50%), Query Frame = 3
Query:  123 KNREKAMKAGEAANNDLLGILMET-SFREIEEHGNNKNVGFSMNDVIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNKPD-YDGLNHLKIVQMILYEVLRLYPPVTMLSRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNF 716
            K +E  +   +    DLL +++ + + +EI+ H    ++     +++ +  +F F G ETTS  L++ +  L+ H   Q++ ++E+   F N  P  YD L  ++ + M++ E LR++P    L R   K+ ++  +T+P G  + +P+ ++H +PELW  +  EF+PERF++  +K + N   Y PF  GPR C+G  F
Sbjct:  255 KIKESRLTDKQMNRVDLLQLMINSQNSKEIDNHKALSDI-----ELVAQSTIFIFGGYETTSSTLSFIIYELTTHPHVQQKLQEEIDATFPNKAPPTYDALVQMEYLDMVVNETLRMFPIAGRLERVCKKDVEIHGVTIPKGTTVLVPLFVLHNNPELW-PEPEEFRPERFSKN-NKDSINPYVYLPFGTGPRNCLGMRF 447          

HSP 2 Score: 22.7126 bits (47), Expect = 1.446e-23
Identity = 9/18 (50.00%), Postives = 13/18 (72.22%), Query Frame = 1
Query:  715 FALVEAKMATTMILQNYS 768
            FA++  K+A   ILQN+S
Sbjct:  447 FAIMNIKLALVRILQNFS 464          
BLAST of CN188375 vs. ExPASy Swiss-Prot
Match: CP3AD_MOUSE (Cytochrome P450 3A13 OS=Mus musculus GN=Cyp3a13 PE=2 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 2.448e-23
Identity = 62/198 (31.31%), Postives = 106/198 (53.54%), Query Frame = 3
Query:  129 REKAMKAGEAANNDLLGILMET-SFREIEEHGNNKNVGFSMNDVIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNKP-DYDGLNHLKIVQMILYEVLRLYPPVTMLSRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNF 716
            +E  MK  E    D L +++ + +++  E H    +V     +++ +  +F FAG ETTS  L++ + LL+ H D Q++ + E+     N  P  YD L  ++ + M++ E LRLYP    L R    + ++  L +P G  + +P   +H+DP+ W  +  EF+PERF++  ++ + N   Y PF  GPR C+G  F
Sbjct:  257 KENRMKEKEKQRVDFLQLMINSQNYKTKESHKALSDV-----EIVAQSVIFIFAGYETTSSALSFALYLLAIHPDVQKKLQDEIDAALPNKAPATYDTLLQMEYLDMVVNETLRLYPIAGRLERVCKTDVEINGLFIPKGTVVMIPTFALHKDPKYW-PEPEEFRPERFSKK-NQDSINPYMYLPFGSGPRNCIGMRF 447          

HSP 2 Score: 22.3274 bits (46), Expect = 2.448e-23
Identity = 8/18 (44.44%), Postives = 13/18 (72.22%), Query Frame = 1
Query:  715 FALVEAKMATTMILQNYS 768
            FAL+  K+A   +LQN++
Sbjct:  447 FALINMKVALVRVLQNFT 464          
The following BLAST results are available for this feature:
BLAST of CN188375 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 384
Match NameE-valueIdentityDescription
C72A1_CATRO9.993e-8860.41Secologanin synthase OS=Catharanthus roseus GN=CYP... [more]
C13A1_CAEEL9.837e-2731.19Putative cytochrome P450 CYP13A1 OS=Caenorhabditis... [more]
C13B1_CAEEL8.328e-2633.97Putative cytochrome P450 cyp-13B1 OS=Caenorhabditi... [more]
CP3AO_SHEEP2.781e-2530.54Cytochrome P450 3A24 OS=Ovis aries GN=CYP3A24 PE=2... [more]
CP3AT_PIG6.130e-2532.98Cytochrome P450 3A29 OS=Sus scrofa GN=CYP3A29 PE=2... [more]
C13A2_CAEEL7.050e-2529.77Putative cytochrome P450 CYP13A2 OS=Caenorhabditis... [more]
C13AA_CAEEL1.203e-2429.57Putative cytochrome P450 CYP13A10 OS=Caenorhabditi... [more]
CP3AC_CANFA6.562e-2431.37Cytochrome P450 3A12 OS=Canis familiaris GN=CYP3A1... [more]
CP3AS_BOVIN1.446e-2330.00Cytochrome P450 3A28 OS=Bos taurus GN=CYP3A28 PE=2... [more]
CP3AD_MOUSE2.448e-2331.31Cytochrome P450 3A13 OS=Mus musculus GN=Cyp3a13 PE... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0005O24_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0005O24, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188375 ID=CN188375; Name=CN188375; organism=Citrus sinensis; type=EST; length=769bp
GAGGCACAATGCAAGTCTTTCGTTCAGTTCACATTCCAGGATGGAGGTTT
TTACCTACAAAGAGAAATAGGAGAATGAAAGAAATTGACAAGGAAATCCG
GGCTTCATTGATGGGAATCATCAAAAATAGGGAGAAGGCAATGAAAGCAG
GGGAAGCTGCGAATAATGACTTGTTAGGCATACTGATGGAAACCAGTTTT
AGAGAGATTGAAGAACATGGAAATAACAAAAATGTTGGGTTCAGCATGAA
CGATGTGATCGAAGAGTGTAAGCTATTTTACTTTGCCGGCCAAGAGACTA
CCTCTGTTTTGCTTAATTGGACGATGGTCTTATTGAGCAAGCATCAAGAT
TGGCAAGAACGTGCAAGGCAAGAGGTTTTGCAAGTGTTTGGCAATAATAA
GCCCGACTATGATGGATTGAATCACCTCAAAATTGTCCAGATGATACTTT
ATGAGGTACTCAGGCTTTATCCGCCCGTAACTATGCTTAGTCGAGCTGTT
CTTAAGGAAACGAAACTCGGAAACTTGACATTACCCGCTGGGGTTCAAAT
TGGCTTGCCAATGATCCTAGTTCACCAGGATCCTGAACTTTGGGGTGACG
ATGCAGTTGAGTTTAAGCCGGAAAGGTTTGCGGAAGGAATTTCAAAGGCG
GCGAAAAATCAAGTTTCATATTTCCCATTCGCATTGGGTCCTAGGATATG
TGTTGGACAAAATTTTTGCTCTAGTAGAAGCAAAAATGGCCACGACAATG
ATTCTTCAAAACTACTCAT
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