CN188370

Overview
NameCN188370
Unique NameCN188370
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length815
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2433 contig Csv1_Contig2433:313..1127. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CN188370 vs. ExPASy Swiss-Prot
Match: 6PGL1_ARATH (Probable 6-phosphogluconolactonase 1 OS=Arabidopsis thaliana GN=At1g13700 PE=2 SV=1)

HSP 1 Score: 260.766 bits (665), Expect = 6.710e-69
Identity = 130/189 (68.78%), Postives = 151/189 (79.89%), Query Frame = -1 
Query:  255 DERVVAKNHSDSNYKLAKEGLLSKVPIVPSHVHSINDSLSAEEAADEYEFDIRQLVKTRMVCVSDISDCPKFDLILLGMGSDGHVASLFPNHSVLDVKNQWVSFITDSPKPPPERITFTLPVINSASNXXXXVTGESKAEAVHLAIDD--LGPNCPSLPARMAQPTNGKLVWFLDKPAASKLQSVQFCE 815
            DERVVAKNH DSNYKLAK+ LLSKV + P H+ SIND++SAEEAA EYEF IRQ+V++R V  SD SD P+FDLILLGMGSDGHVASLFPNH  L+VK+ WV+F+TDS KPPPERITFTLPVINSA+N     TGESKA A+HLAIDD  L  +  SLPAR+  P+NG L+WF+DK A SKL   +F E
Sbjct:   80 DERVVAKNHDDSNYKLAKDNLLSKVNVFPRHICSINDTVSAEEAATEYEFAIRQMVRSRTVAASDNSDSPRFDLILLGMGSDGHVASLFPNHPALEVKDDWVTFLTDSHKPPPERITFTLPVINSAANVVVVATGESKANAIHLAIDDLPLPDSSLSLPARLVHPSNGNLIWFMDKQAGSKLDRFKFSE 268
[Close]
BLAST of CN188370 vs. ExPASy Swiss-Prot
Match: 6PGL2_ORYSJ (Probable 6-phosphogluconolactonase 2 OS=Oryza sativa subsp. japonica GN=Os07g0604000 PE=2 SV=1)

HSP 1 Score: 257.684 bits (657), Expect = 5.681e-68
Identity = 127/185 (68.65%), Postives = 151/185 (81.62%), Query Frame = -1 
Query:  270 DERVVAKNHSDSNYKLAKEGLLSKVPIVPSHVHSINDSLSAEEAADEYEFDIRQLVKTRMVCVSDISDCPKFDLILLGMGSDGHVASLFPNHSVLDVKNQWVSFITDSPKPPPERITFTLPVINSASNXXXXVTGESKAEAVHLAIDDL--GPNCP-SLPARMAQPTNGKLVWFLDKPAASKLQS 815
            DER VAKNH++SNY++ KEG LSKVPI+  HV+SIND+ + E+AA +YEF IRQLVK R + VS+ +DCPKFDLILL MGSDGHVASLFPNH  L++K+ W+++ITDSP+PPPERITFTLPVINSASN     TG+ K+EAVHLAI D   GP  P SLPARM QPT+GKLVWFLDK AAS L +
Sbjct:   84 DERAVAKNHAESNYRITKEGFLSKVPILNGHVYSINDNATVEDAATDYEFVIRQLVKVRTIGVSESNDCPKFDLILLSMGSDGHVASLFPNHPSLELKDDWITYITDSPQPPPERITFTLPVINSASNIAIVTTGDDKSEAVHLAISDNADGPEAPSSLPARMVQPTDGKLVWFLDKSAASSLDA 268
[Close]
BLAST of CN188370 vs. ExPASy Swiss-Prot
Match: 6PGL2_ORYSI (Probable 6-phosphogluconolactonase 2 OS=Oryza sativa subsp. indica GN=OsI_025867 PE=3 SV=1)

HSP 1 Score: 257.684 bits (657), Expect = 5.681e-68
Identity = 127/185 (68.65%), Postives = 151/185 (81.62%), Query Frame = -1 
Query:  270 DERVVAKNHSDSNYKLAKEGLLSKVPIVPSHVHSINDSLSAEEAADEYEFDIRQLVKTRMVCVSDISDCPKFDLILLGMGSDGHVASLFPNHSVLDVKNQWVSFITDSPKPPPERITFTLPVINSASNXXXXVTGESKAEAVHLAIDDL--GPNCP-SLPARMAQPTNGKLVWFLDKPAASKLQS 815
            DER VAKNH++SNY++ KEG LSKVPI+  HV+SIND+ + E+AA +YEF IRQLVK R + VS+ +DCPKFDLILL MGSDGHVASLFPNH  L++K+ W+++ITDSP+PPPERITFTLPVINSASN     TG+ K+EAVHLAI D   GP  P SLPARM QPT+GKLVWFLDK AAS L +
Sbjct:   84 DERAVAKNHAESNYRITKEGFLSKVPILNGHVYSINDNATVEDAATDYEFVIRQLVKVRTIGVSESNDCPKFDLILLSMGSDGHVASLFPNHPSLELKDDWITYITDSPQPPPERITFTLPVINSASNIAIVTTGDDKSEAVHLAISDNADGPEAPSSLPARMVQPTDGKLVWFLDKSAASSLDA 268
[Close]
BLAST of CN188370 vs. ExPASy Swiss-Prot
Match: 6PGL1_ORYSJ (Probable 6-phosphogluconolactonase 1 OS=Oryza sativa subsp. japonica GN=Os03g0416500 PE=2 SV=1)

HSP 1 Score: 250.751 bits (639), Expect = 6.944e-66
Identity = 125/184 (67.93%), Postives = 148/184 (80.43%), Query Frame = -1 
Query:  270 DERVVAKNHSDSNYKLAKEGLLSKVPIVPSHVHSINDSLSAEEAADEYEFDIRQLVKTRMVCVSDISDCPKFDLILLGMGSDGHVASLFPNHSVLDVKNQWVSFITDSPKPPPERITFTLPVINSASNXXXXVTGESKAEAVHLAIDD--LGPNCPSLPARMAQPTNGKLVWFLDKPAASKLQS 815
            DER VAKNH DS YK  KE  LSKVPI+  HV+SIND+++ E+AA +YEF IRQLVK R V VS+ +DCPKFDLILL +GSDGHVASLFPNH  L++K+ WV++ITDSP PPPERITFTLPVINSASN     TGE KA+AV+ AI D   GP+ PS+PARM QPT+GKLVWFLDK +AS L++
Sbjct:  101 DERAVAKNHVDSYYKSTKEDFLSKVPILNGHVYSINDNVTVEDAATDYEFVIRQLVKIRTVGVSESNDCPKFDLILLSIGSDGHVASLFPNHPALELKDDWVTYITDSPVPPPERITFTLPVINSASNIAVVATGEDKAKAVYFAISDGTEGPDAPSIPARMVQPTDGKLVWFLDKASASFLEA 284
[Close]
BLAST of CN188370 vs. ExPASy Swiss-Prot
Match: 6PGL1_ORYSI (Probable 6-phosphogluconolactonase 1 OS=Oryza sativa subsp. indica GN=OsI_011697 PE=3 SV=2)

HSP 1 Score: 250.751 bits (639), Expect = 6.944e-66
Identity = 125/184 (67.93%), Postives = 148/184 (80.43%), Query Frame = -1 
Query:  270 DERVVAKNHSDSNYKLAKEGLLSKVPIVPSHVHSINDSLSAEEAADEYEFDIRQLVKTRMVCVSDISDCPKFDLILLGMGSDGHVASLFPNHSVLDVKNQWVSFITDSPKPPPERITFTLPVINSASNXXXXVTGESKAEAVHLAIDD--LGPNCPSLPARMAQPTNGKLVWFLDKPAASKLQS 815
            DER VAKNH DS YK  KE  LSKVPI+  HV+SIND+++ E+AA +YEF IRQLVK R V VS+ +DCPKFDLILL +GSDGHVASLFPNH  L++K+ WV++ITDSP PPPERITFTLPVINSASN     TGE KA+AV+ AI D   GP+ PS+PARM QPT+GKLVWFLDK +AS L++
Sbjct:  101 DERAVAKNHVDSYYKSTKEDFLSKVPILNGHVYSINDNVTVEDAATDYEFVIRQLVKIRTVGVSESNDCPKFDLILLSIGSDGHVASLFPNHPALELKDDWVTYITDSPVPPPERITFTLPVINSASNIAVVATGEDKAKAVYFAISDGAEGPDAPSIPARMVQPTDGKLVWFLDKASASFLEA 284
[Close]
BLAST of CN188370 vs. ExPASy Swiss-Prot
Match: 6PGL3_ORYSJ (Probable 6-phosphogluconolactonase 3, chloroplastic OS=Oryza sativa subsp. japonica GN=Os08g0547100 PE=2 SV=1)

HSP 1 Score: 211.075 bits (536), Expect = 6.097e-54
Identity = 105/183 (57.38%), Postives = 131/183 (71.58%), Query Frame = -1 
Query:  267 DERVVAKNHSDSNYKLAKEGLLSKVPIVPSHVHSINDSLSAEEAADEYEFDIRQLVKTRMVCVSDISDCPKFDLILLGMGSDGHVASLFPNHSVLDVKNQWVSFITDSPKPPPERITFTLPVINSASNXXXXVTGESKAEAVHLAIDDLGPNCPSLPARMAQPTNGKLVWFLDKPAASKLQSV 815
            DERVV K+H+DSNYKLA +GLLSKVPI  S +++IND+LSAE AADEYE  ++QLV   +V +S+++  PK DL+LLGMG DGHVASLFP H V++   +WVS+I DSPKPPPERITFT P++NS+++    VTG  KA AVH A  D   +   LP  M     G L WF DKPA S L S+
Sbjct:  145 DERVVPKDHADSNYKLAMDGLLSKVPIPASQIYAINDTLSAEGAADEYETCLKQLVNDGVVAISEVTGFPKLDLMLLGMGPDGHVASLFPGHPVVNENLKWVSYIKDSPKPPPERITFTFPLVNSSAHIALVVTGAGKAGAVHKAFSDKQSSSDLLPVEMVSQQEGVLTWFTDKPAVSMLSSI 327
[Close]
BLAST of CN188370 vs. ExPASy Swiss-Prot
Match: 6PGL3_ORYSI (Probable 6-phosphogluconolactonase 3, chloroplastic OS=Oryza sativa subsp. indica GN=OsI_30141 PE=3 SV=2)

HSP 1 Score: 211.075 bits (536), Expect = 6.097e-54
Identity = 105/183 (57.38%), Postives = 131/183 (71.58%), Query Frame = -1 
Query:  267 DERVVAKNHSDSNYKLAKEGLLSKVPIVPSHVHSINDSLSAEEAADEYEFDIRQLVKTRMVCVSDISDCPKFDLILLGMGSDGHVASLFPNHSVLDVKNQWVSFITDSPKPPPERITFTLPVINSASNXXXXVTGESKAEAVHLAIDDLGPNCPSLPARMAQPTNGKLVWFLDKPAASKLQSV 815
            DERVV K+H+DSNYKLA +GLLSKVPI  S +++IND+LSAE AADEYE  ++QLV   +V +S+++  PK DL+LLGMG DGHVASLFP H V++   +WVS+I DSPKPPPERITFT P++NS+++    VTG  KA AVH A  D   +   LP  M     G L WF DKPA S L S+
Sbjct:  145 DERVVPKDHADSNYKLAMDGLLSKVPIPASQIYAINDTLSAEGAADEYETCLKQLVNDGVVAISEVTGFPKLDLMLLGMGPDGHVASLFPGHPVVNENLKWVSYIKDSPKPPPERITFTFPLVNSSAHIALVVTGAGKAGAVHKAFSDKQSSSDLLPVEMVSQQEGVLTWFTDKPAVSMLSSI 327
[Close]
BLAST of CN188370 vs. ExPASy Swiss-Prot
Match: 6PGL4_ORYSJ (Probable 6-phosphogluconolactonase 4, chloroplastic OS=Oryza sativa subsp. japonica GN=Os09g0529100 PE=2 SV=2)

HSP 1 Score: 201.06 bits (510), Expect = 6.310e-51
Identity = 100/182 (54.95%), Postives = 129/182 (70.88%), Query Frame = -1 
Query:  270 DERVVAKNHSDSNYKLAKEGLLSKVPIVPSHVHSINDSLSAEEAADEYEFDIRQLVKTRMVCVSDISDCPKFDLILLGMGSDGHVASLFPNHSVLDVKNQWVSFITDSPKPPPERITFTLPVINSASNXXXXVTGESKAEAVHLAIDDLGPNCPSLPARMAQPTNGKLVWFLDKPAASKLQS 815
            DERVV K+H DSNYKLA +G LSKVPI    V++IND+LSAE AAD+YE  ++QLVK  ++ +S  +  P+FD++LLGMG DGH+ASLFP H +++   +WV++I DSPKPPPERITFT PVINS++     VTG  KA AV  A+ D   +   LP  MA   +G+  WF DKPA S LQ+
Sbjct:  142 DERVVPKDHEDSNYKLALDGFLSKVPIPTGQVYAINDALSAEGAADDYETCLKQLVKNGVIAMSQSTGFPRFDVMLLGMGPDGHIASLFPGHPLVNENKKWVTYIKDSPKPPPERITFTFPVINSSAYVAMVVTGAGKAGAVQKALSDKQTSSDLLPVEMAVLQDGEFTWFTDKPAVSMLQN 323
[Close]
BLAST of CN188370 vs. ExPASy Swiss-Prot
Match: 6PGL4_ORYSI (Probable 6-phosphogluconolactonase 4, chloroplastic OS=Oryza sativa subsp. indica GN=OsI_031067 PE=3 SV=2)

HSP 1 Score: 201.06 bits (510), Expect = 6.310e-51
Identity = 100/182 (54.95%), Postives = 129/182 (70.88%), Query Frame = -1 
Query:  270 DERVVAKNHSDSNYKLAKEGLLSKVPIVPSHVHSINDSLSAEEAADEYEFDIRQLVKTRMVCVSDISDCPKFDLILLGMGSDGHVASLFPNHSVLDVKNQWVSFITDSPKPPPERITFTLPVINSASNXXXXVTGESKAEAVHLAIDDLGPNCPSLPARMAQPTNGKLVWFLDKPAASKLQS 815
            DERVV K+H DSNYKLA +G LSKVPI    V++IND+LSAE AAD+YE  ++QLVK  ++ +S  +  P+FD++LLGMG DGH+ASLFP H +++   +WV++I DSPKPPPERITFT PVINS++     VTG  KA AV  A+ D   +   LP  MA   +G+  WF DKPA S LQ+
Sbjct:  142 DERVVPKDHEDSNYKLALDGFLSKVPIPTGQVYAINDALSAEGAADDYETCLKQLVKNGVIAMSQSTGFPRFDVMLLGMGPDGHIASLFPGHPLVNENKKWVTYIKDSPKPPPERITFTFPVINSSAYVAMVVTGAGKAGAVQKALSDKQTSSDLLPVEMAVLQDGEFTWFTDKPAVSMLQN 323
[Close]
BLAST of CN188370 vs. ExPASy Swiss-Prot
Match: 6PGL5_ARATH (Probable 6-phosphogluconolactonase 5, chloroplastic OS=Arabidopsis thaliana GN=EMB2024 PE=2 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 4.522e-49
Identity = 101/180 (56.11%), Postives = 128/180 (71.11%), Query Frame = -1 
Query:  276 DERVVAKNHSDSNYKLAKEGLLSKVPIVPSHVHSINDSLSAEEAADEYEFDIRQLVKTRMVCVSDISDCPKFDLILLGMGSDGHVASLFPNHSVLDVKNQWVSFITDSPKPPPERITFTLPVINSASNXXXXVTGESKAEAVHLAIDDLGPNCPSLPARMAQPTNGKLVWFLDKPAASKL 815
            DERVV KNH DSNYKLA +  LSKVPI P +V++IN++LSAE AAD+YE  ++ LV T ++ VS+ +  PKFDL+LLGMG DGHVASLFP H + +   +WV  I+DSPKPP ERITFT PVINS+++    V G  KAEAV  A+   G    ++P   +     +LVWFLDKPA+SKL
Sbjct:  150 DERVVPKNHDDSNYKLAYDSFLSKVPIPPGNVYAINEALSAEAAADDYETCLKHLVNTNILRVSESTGFPKFDLMLLGMGPDGHVASLFPGHGLCNESKKWVVSISDSPKPPSERITFTFPVINSSAHVALVVCGSGKAEAVEAALKKTG----NVPPAGSVSAEDELVWFLDKPASSKL 325
The following BLAST results are available for this feature:
BLAST of CN188370 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 39
Match NameE-valueIdentityDescription
6PGL1_ARATH6.710e-6968.78Probable 6-phosphogluconolactonase 1 OS=Arabidopsi... [more]
6PGL2_ORYSJ5.681e-6868.65Probable 6-phosphogluconolactonase 2 OS=Oryza sati... [more]
6PGL2_ORYSI5.681e-6868.65Probable 6-phosphogluconolactonase 2 OS=Oryza sati... [more]
6PGL1_ORYSJ6.944e-6667.93Probable 6-phosphogluconolactonase 1 OS=Oryza sati... [more]
6PGL1_ORYSI6.944e-6667.93Probable 6-phosphogluconolactonase 1 OS=Oryza sati... [more]
6PGL3_ORYSJ6.097e-5457.38Probable 6-phosphogluconolactonase 3, chloroplasti... [more]
6PGL3_ORYSI6.097e-5457.38Probable 6-phosphogluconolactonase 3, chloroplasti... [more]
6PGL4_ORYSJ6.310e-5154.95Probable 6-phosphogluconolactonase 4, chloroplasti... [more]
6PGL4_ORYSI6.310e-5154.95Probable 6-phosphogluconolactonase 4, chloroplasti... [more]
6PGL5_ARATH4.522e-4956.11Probable 6-phosphogluconolactonase 5, chloroplasti... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0005O20_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0005O20, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188370 ID=CN188370; Name=CN188370; organism=Citrus sinensis; type=EST; length=815bp
GAGGAAGGCTTTCTCATTGAGGCTCCAACATTATTTACCTCATCTTACAA
AAAAGATCACAACACTTCTCAACCCCACTAGAAAAGAGAGGATTAAAAAG
AGAATCTAGGGGGAAAAAAGGCCAAAATGGAGAATTCAACCCAAAGCAAC
ATAAAAGAAGTGGCGCCTAACGGAAGAAGCTAAAAGGATCAATAGTTCTC
AAACCCCTCCACTACATACAAACATACACTTGGGCAAGAATTGCTTTGAC
CCTACTCACAAAATTGAACACTTTGGAGCTTTGAGGCAGCCGGCTTGTCC
AAAAACCATACCAACTTCCCATTTGTTGGCTGGGCCATTCGTGCTGGCAG
TGATGGGCAATTAGGTCCAAGGTCATCAATCGCCAAGTGCACAGCCTCTG
CCTTGCTCTCACCTGTCACGACCACAACTACATTGGATGCTGAGTTGATG
ACAGGCAAAGTGAATGTGATCCTCTCTGGTGGGGGTTTAGGCGAATCAGT
GATAAAGCTTACCCACTGATTTTTCACATCAAGCACCGAATGGTTAGGGA
ACAGTGAGGCAACATGGCCATCAGAGCCCATTCCAAGAAGAATGAGGTCA
AATTTGGGGCAGTCACTAATATCAGAGACACAGACCATCCGGGTTTTCAC
CAGCTGTCGGATGTCAAACTCATACTCATCAGCAGCCTCCTCTGCTGACA
ATGAATCATTAATGGAATGTACGTGACTGGGAACTATCGGAACCTTGGAC
AAAAGGCCTTCCTTTGCAAGCTTATAATTGCTATCAGAATGATTTTTTGC
CACTACGCGTTCGTC
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