CN188357

Overview
NameCN188357
Unique NameCN188357
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length720
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2658 contig Csv1_Contig2658:1..720. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN188357 vs. ExPASy Swiss-Prot
Match: DNJH_ATRNU (DnaJ protein homolog ANJ1 OS=Atriplex nummularia PE=2 SV=1)

HSP 1 Score: 295.819 bits (756), Expect = 1.515e-79
Identity = 152/207 (73.43%), Postives = 157/207 (75.85%), Query Frame = 3
Query:  102 MFGRAPKKSNNTRYYEILGVSKNASAEDLKKAYKKAAIKNHPDKGGDPEKFKELAQAYEVLSDPEKREIYDQYGEDALKEGMGGGAGAHDPFDI-XXXXXXXXXXXXXXXXXXXXXXXEDVVHPLKVSLEDLYLGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGTGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDKDRC 719
            MFGRAPKKS++TRYYEILGV K+AS EDLKKAYKKAAIKNHPDKGGDPEKFKELA AYEVLSDPEKREIYDQYGEDALKEGMGGG G HDPFDI                        EDVVHPLKVSLEDL+ GT+KKLSLSRNVI                    QGTGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDKDRC
Sbjct:    1 MFGRAPKKSDSTRYYEILGVPKDASPEDLKKAYKKAAIKNHPDKGGDPEKFKELAHAYEVLSDPEKREIYDQYGEDALKEGMGGGGGMHDPFDIFQSFFGGSPFGGVGSSRGRRQRRGEDVVHPLKVSLEDLFTGTTKKLSLSRNVICSKCTGKGSKSGASMKCSGCQGTGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDKDRC 207          
BLAST of CN188357 vs. ExPASy Swiss-Prot
Match: DNJH_CUCSA (DnaJ protein homolog OS=Cucumis sativus GN=DNAJ1 PE=2 SV=1)

HSP 1 Score: 289.656 bits (740), Expect = 1.085e-77
Identity = 152/207 (73.43%), Postives = 158/207 (76.33%), Query Frame = 3
Query:  102 MFGRAPKKSNNTRYYEILGVSKNASAEDLKKAYKKAAIKNHPDKGGDPEKFKELAQAYEVLSDPEKREIYDQYGEDALKEGMGGGAGAHDPFDI-XXXXXXXXXXXXXXXXXXXXXXXEDVVHPLKVSLEDLYLGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGTGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDKDRC 719
            MFGR PKKS+NT+YYEILGVSKNAS +DLKKAY+KAAIKNHPDKGGDPEKFKELAQAYEVLSDPEKREIYDQYGEDALKEGMGGG G HDPFDI                        EDV+HPLKVSLEDLY GTSKKLSLSRNVI                    QG+GMKVSIRHLGPSMIQQMQHPCNECKGTGETINDKDRC
Sbjct:    1 MFGR-PKKSDNTKYYEILGVSKNASQDDLKKAYRKAAIKNHPDKGGDPEKFKELAQAYEVLSDPEKREIYDQYGEDALKEGMGGG-GGHDPFDIFQSFFGGSPFGGGGSSRGRRQRRGEDVIHPLKVSLEDLYNGTSKKLSLSRNVICSKCKGKGSKSGASMKCPGCQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDKDRC 205          
BLAST of CN188357 vs. ExPASy Swiss-Prot
Match: DNAJ3_ARATH (Chaperone protein dnaJ 3 OS=Arabidopsis thaliana GN=ATJ3 PE=1 SV=2)

HSP 1 Score: 284.648 bits (727), Expect = 3.492e-76
Identity = 145/207 (70.05%), Postives = 153/207 (73.91%), Query Frame = 3
Query:  102 MFGRAP-KKSNNTRYYEILGVSKNASAEDLKKAYKKAAIKNHPDKGGDPEKFKELAQAYEVLSDPEKREIYDQYGEDALKEGMGGGAGAHDPFDIXXXXXXXXXXXXXXXXXXXXXXXEDVVHPLKVSLEDLYLGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGTGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDKDRC 719
            MFGR P KKS+NT++YEILGV K+AS EDLKKAYKKAAIKNHPDKGGDPEKFKELAQAYEVLSDPEKREIYDQYGEDALKEGMGGG G HDPFDI                       EDVVHPLKVSLED+YLGT KKLSLSRN +                    QG+GMKVSIR LGP MIQQMQH CNECKGTGETIND+DRC
Sbjct:    1 MFGRGPSKKSDNTKFYEILGVPKSASPEDLKKAYKKAAIKNHPDKGGDPEKFKELAQAYEVLSDPEKREIYDQYGEDALKEGMGGGGGGHDPFDIFSSFFGGGPFGGNTSRQRRQRRGEDVVHPLKVSLEDVYLGTMKKLSLSRNALCSKCNGKGSKSGASLKCGGCQGSGMKVSIRQLGPGMIQQMQHACNECKGTGETINDRDRC 207          
BLAST of CN188357 vs. ExPASy Swiss-Prot
Match: DNJH2_ALLPO (DnaJ protein homolog 2 OS=Allium porrum GN=LDJ2 PE=2 SV=1)

HSP 1 Score: 284.263 bits (726), Expect = 4.560e-76
Identity = 143/207 (69.08%), Postives = 154/207 (74.40%), Query Frame = 3
Query:  102 MFGRAPKKSNNTRYYEILGVSKNASAEDLKKAYKKAAIKNHPDKGGDPEKFKELAQAYEVLSDPEKREIYDQYGEDALKEGMGGGAGAHDPFDI-XXXXXXXXXXXXXXXXXXXXXXXEDVVHPLKVSLEDLYLGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGTGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDKDRC 719
            MFGRAPKKS+NT+YYE+LGVSKNA+ EDLKKAY+KAAIKNHPDKGGDPEKFKE+ QAYEVL+DPEKREIYDQYGE+ LKEGMGGG G HDPFDI                        EDVVHPLKVSLEDLY GTSKKLSLSRNV+                    QG+GMKVSIR LGP MIQQMQHPCNECKGTGE I+DKDRC
Sbjct:    1 MFGRAPKKSDNTKYYEVLGVSKNATPEDLKKAYRKAAIKNHPDKGGDPEKFKEIGQAYEVLNDPEKREIYDQYGEEGLKEGMGGGGGVHDPFDIFQSFFGGGGFGGGGSSRGRRQRRGEDVVHPLKVSLEDLYNGTSKKLSLSRNVLCTKCKGKGSKSGASMNCASCQGSGMKVSIRQLGPGMIQQMQHPCNECKGTGEMISDKDRC 207          
BLAST of CN188357 vs. ExPASy Swiss-Prot
Match: DNAJ2_ARATH (Chaperone protein dnaJ 2 OS=Arabidopsis thaliana GN=ATJ2 PE=1 SV=2)

HSP 1 Score: 270.011 bits (689), Expect = 8.900e-72
Identity = 137/208 (65.87%), Postives = 151/208 (72.60%), Query Frame = 3
Query:  102 MFGRAP-KKSNNTRYYEILGVSKNASAEDLKKAYKKAAIKNHPDKGGDPEKFKELAQAYEVLSDPEKREIYDQYGEDALKEGMGGGAGAHDPFDI-XXXXXXXXXXXXXXXXXXXXXXXEDVVHPLKVSLEDLYLGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGTGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDKDRC 719
            MFGR P +KS+NT++YEILGV K A+ EDLKKAYKKAAIKNHPDKGGDPEKFKELAQAYEVLSDPEKREIYDQYGEDALKEGMGGG G HDPFDI                        EDVVHPLKVSLED+YLGT+KKLSLSR  +                    QG+GMK+SIR  GP M+QQ+QH CN+CKGTGETIND+DRC
Sbjct:    1 MFGRGPSRKSDNTKFYEILGVPKTAAPEDLKKAYKKAAIKNHPDKGGDPEKFKELAQAYEVLSDPEKREIYDQYGEDALKEGMGGGGGGHDPFDIFSSFFGSGGHPFGSHSRGRRQRRGEDVVHPLKVSLEDVYLGTTKKLSLSRKALCSKCNGKGSKSGASMKCGGCQGSGMKISIRQFGPGMMQQVQHACNDCKGTGETINDRDRC 208          
BLAST of CN188357 vs. ExPASy Swiss-Prot
Match: DNJH1_ALLPO (DnaJ protein homolog 1 (Fragment) OS=Allium porrum GN=DNAJ1 PE=2 SV=1)

HSP 1 Score: 249.98 bits (637), Expect = 9.531e-66
Identity = 129/186 (69.35%), Postives = 135/186 (72.58%), Query Frame = 3
Query:  165 KNASAEDLKKAYKKAAIKNHPDKGGDPEKFKELAQAYEVLSDPEKREIYDQYGEDALKEGMGGGAGAHDPFDI-XXXXXXXXXXXXXXXXXXXXXXXEDVVHPLKVSLEDLYLGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGTGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDKDRC 719
            KNAS +DLKKAY+KAAIKNHPDKGGDPEKFKELAQAY+VLSDPEKREIYDQYGEDALKEGMGGG G HDPFDI                        EDVVHPLKVSLE+LY GTSKKLSLSRNVI                    QG+GMKVSIR LGP MIQQMQHPCN+CKGTGE INDKDRC
Sbjct:    1 KNASPDDLKKAYRKAAIKNHPDKGGDPEKFKELAQAYDVLSDPEKREIYDQYGEDALKEGMGGGGGDHDPFDIFQSFFGGGGFGGGGSSRGRRQRRGEDVVHPLKVSLEELYNGTSKKLSLSRNVICSKCNGKGSKSGASMRCASCQGSGMKVSIRQLGPGMIQQMQHPCNDCKGTGEMINDKDRC 186          
BLAST of CN188357 vs. ExPASy Swiss-Prot
Match: DNJA2_RAT (DnaJ homolog subfamily A member 2 OS=Rattus norvegicus GN=Dnaja2 PE=2 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 1.134e-42
Identity = 90/197 (45.69%), Postives = 117/197 (59.39%), Query Frame = 3
Query:  132 NTRYYEILGVSKNASAEDLKKAYKKAAIKNHPDKGGDP-EKFKELAQAYEVLSDPEKREIYDQYGEDALKEGMGGGAGAHDPFDIXXXXXXXXXXXXXXXXXXXXXXXEDVVHPLKVSLEDLYLGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGTGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDKDRC 719
            +T+ Y+ILGV   AS  +LKKAY+K A + HPDK  +  +KFKE++ AYEVLS+PEKRE+YD+YGE  L+EG GGG G  D F                         ED++HPLKVSLEDLY G + KL LS+NV+                    +G G+++ IR L P M+QQMQ  C++C G GE IN+KDRC
Sbjct:    6 DTKLYDILGVPPGASENELKKAYRKLAKEYHPDKNPNAGDKFKEISFAYEVLSNPEKRELYDRYGEQGLREGSGGGGGMDDIFSHIFGGGLFGFMGNQSRSRNGRRRGEDMMHPLKVSLEDLYNGKTTKLQLSKNVLCSACSGQGGKSGAVQKCSACRGRGVRIMIRQLAPGMVQQMQSVCSDCNGEGEVINEKDRC 202          
BLAST of CN188357 vs. ExPASy Swiss-Prot
Match: DNJA2_MOUSE (DnaJ homolog subfamily A member 2 OS=Mus musculus GN=Dnaja2 PE=1 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 1.134e-42
Identity = 90/197 (45.69%), Postives = 117/197 (59.39%), Query Frame = 3
Query:  132 NTRYYEILGVSKNASAEDLKKAYKKAAIKNHPDKGGDP-EKFKELAQAYEVLSDPEKREIYDQYGEDALKEGMGGGAGAHDPFDIXXXXXXXXXXXXXXXXXXXXXXXEDVVHPLKVSLEDLYLGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGTGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDKDRC 719
            +T+ Y+ILGV   AS  +LKKAY+K A + HPDK  +  +KFKE++ AYEVLS+PEKRE+YD+YGE  L+EG GGG G  D F                         ED++HPLKVSLEDLY G + KL LS+NV+                    +G G+++ IR L P M+QQMQ  C++C G GE IN+KDRC
Sbjct:    6 DTKLYDILGVPPGASENELKKAYRKLAKEYHPDKNPNAGDKFKEISFAYEVLSNPEKRELYDRYGEQGLREGSGGGGGMDDIFSHIFGGGLFGFMGNQSRSRNGRRRGEDMMHPLKVSLEDLYNGKTTKLQLSKNVLCSACSGQGGKSGAVQKCSACRGRGVRIMIRQLAPGMVQQMQSVCSDCNGEGEVINEKDRC 202          
BLAST of CN188357 vs. ExPASy Swiss-Prot
Match: DNJA2_HUMAN (DnaJ homolog subfamily A member 2 OS=Homo sapiens GN=DNAJA2 PE=1 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 1.134e-42
Identity = 90/197 (45.69%), Postives = 117/197 (59.39%), Query Frame = 3
Query:  132 NTRYYEILGVSKNASAEDLKKAYKKAAIKNHPDKGGDP-EKFKELAQAYEVLSDPEKREIYDQYGEDALKEGMGGGAGAHDPFDIXXXXXXXXXXXXXXXXXXXXXXXEDVVHPLKVSLEDLYLGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGTGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDKDRC 719
            +T+ Y+ILGV   AS  +LKKAY+K A + HPDK  +  +KFKE++ AYEVLS+PEKRE+YD+YGE  L+EG GGG G  D F                         ED++HPLKVSLEDLY G + KL LS+NV+                    +G G+++ IR L P M+QQMQ  C++C G GE IN+KDRC
Sbjct:    6 DTKLYDILGVPPGASENELKKAYRKLAKEYHPDKNPNAGDKFKEISFAYEVLSNPEKRELYDRYGEQGLREGSGGGGGMDDIFSHIFGGGLFGFMGNQSRSRNGRRRGEDMMHPLKVSLEDLYNGKTTKLQLSKNVLCSACSGQGGKSGAVQKCSACRGRGVRIMIRQLAPGMVQQMQSVCSDCNGEGEVINEKDRC 202          
BLAST of CN188357 vs. ExPASy Swiss-Prot
Match: DNJA2_BOVIN (DnaJ homolog subfamily A member 2 OS=Bos taurus GN=DNAJA2 PE=2 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 1.134e-42
Identity = 90/197 (45.69%), Postives = 117/197 (59.39%), Query Frame = 3
Query:  132 NTRYYEILGVSKNASAEDLKKAYKKAAIKNHPDKGGDP-EKFKELAQAYEVLSDPEKREIYDQYGEDALKEGMGGGAGAHDPFDIXXXXXXXXXXXXXXXXXXXXXXXEDVVHPLKVSLEDLYLGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGTGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDKDRC 719
            +T+ Y+ILGV   AS  +LKKAY+K A + HPDK  +  +KFKE++ AYEVLS+PEKRE+YD+YGE  L+EG GGG G  D F                         ED++HPLKVSLEDLY G + KL LS+NV+                    +G G+++ IR L P M+QQMQ  C++C G GE IN+KDRC
Sbjct:    6 DTKLYDILGVPPGASENELKKAYRKLAKEYHPDKNPNAGDKFKEISFAYEVLSNPEKRELYDRYGEQGLREGSGGGGGMDDIFSHIFGGGLFSFMGNQSRSRNGRRRGEDMMHPLKVSLEDLYNGKTTKLQLSKNVLCSACSGQGGKSGAVQKCSACRGRGVRIMIRQLAPGMVQQMQSVCSDCNGEGEVINEKDRC 202          
The following BLAST results are available for this feature:
BLAST of CN188357 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNJH_ATRNU1.515e-7973.43DnaJ protein homolog ANJ1 OS=Atriplex nummularia P... [more]
DNJH_CUCSA1.085e-7773.43DnaJ protein homolog OS=Cucumis sativus GN=DNAJ1 P... [more]
DNAJ3_ARATH3.492e-7670.05Chaperone protein dnaJ 3 OS=Arabidopsis thaliana G... [more]
DNJH2_ALLPO4.560e-7669.08DnaJ protein homolog 2 OS=Allium porrum GN=LDJ2 PE... [more]
DNAJ2_ARATH8.900e-7265.87Chaperone protein dnaJ 2 OS=Arabidopsis thaliana G... [more]
DNJH1_ALLPO9.531e-6669.35DnaJ protein homolog 1 (Fragment) OS=Allium porrum... [more]
DNJA2_RAT1.134e-4245.69DnaJ homolog subfamily A member 2 OS=Rattus norveg... [more]
DNJA2_MOUSE1.134e-4245.69DnaJ homolog subfamily A member 2 OS=Mus musculus ... [more]
DNJA2_HUMAN1.134e-4245.69DnaJ homolog subfamily A member 2 OS=Homo sapiens ... [more]
DNJA2_BOVIN1.134e-4245.69DnaJ homolog subfamily A member 2 OS=Bos taurus GN... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0005O11_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0005O11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188357 ID=CN188357; Name=CN188357; organism=Citrus sinensis; type=EST; length=720bp
GACGGGCTTTTGGGGGCTCTCCTGTAGCGTTCTCCGCGAGAAAAATAATT
TTCTGGGTCTGTTTCGTTTCTGTGGATTCCTGTTAAGAAACTCAAAACAA
GATGTTTGGAAGAGCACCGAAGAAGAGCAATAATACGAGGTACTATGAGA
TCCTGGGGGTGTCCAAGAACGCTTCCGCTGAGGACTTGAAGAAGGCTTAT
AAAAAAGCTGCCATCAAGAATCATCCCGACAAGGGCGGCGATCCTGAGAA
GTTTAAAGAGTTGGCTCAGGCTTACGAGGTTCTGAGTGATCCTGAGAAGC
GTGAGATATATGATCAGTACGGTGAGGATGCACTCAAGGAAGGAATGGGT
GGTGGCGCTGGCGCCCATGACCCGTTTGATATCTTTTCGTCTTTCTTTGG
CGGCAGCCCATTCGGAGGTGGTAGCAGCAGGGGACGGAGACAGAGGCGGG
GCGAGGACGTGGTTCATCCTTTGAAGGTGTCCTTGGAGGATCTTTATCTG
GGTACCTCGAAGAAGCTCTCACTTTCGCGGAATGTGATATGCTCGAAGTG
CAGTGGCAAAGGGTCAAAATCTGGCGCTTCGATGAAGTGTTCTGGTTGCC
AAGGTACTGGTATGAAGGTCTCGATAAGGCACCTAGGACCCTCTATGATT
CAGCAGATGCAGCATCCTTGCAATGAATGCAAGGGTACCGGTGAGACCAT
CAACGATAAAGATCGCTGCC
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