CN188356

Overview
NameCN188356
Unique NameCN188356
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length757
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2657 contig Csv1_Contig2657:1..750. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN188356 vs. ExPASy Swiss-Prot
Match: DNJH2_ALLPO (DnaJ protein homolog 2 OS=Allium porrum GN=LDJ2 PE=2 SV=1)

HSP 1 Score: 307.76 bits (787), Expect = 4.221e-83
Identity = 146/176 (82.95%), Postives = 163/176 (92.61%), Query Frame = -3
Query:  219 DEAPDTVTGDIVFVLQQKEHPKFKRKGEDLFYEHTLSLTEALCGFQFALTHLDGRQLLIKSNPGEVVKPDSYKAINEEGMPLYQRPFMKGKLYIHFTVEFPDSLTPDQVKALEAILPSRPLSGMTDMELDECEETTLHDVNIEEEMRRKQ-AHAQEAYEEDEDMPGGAQRVQCAQQ 743
            DEAPDTVTGDIVFVLQQKEHPKFKRKG+DLFYEH+LSLTEALCGFQF LTHLD RQLLIKSNPGEV+KPD +K IN+EGMP+YQRPFM+GKLYIHF+V+FPDSLTPDQ KALE++LPSR  S +TDME+DECEETT+HDVNIEEEMRRKQ   AQEAY+ED++  GGAQRVQCAQQ
Sbjct:  243 DEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFYEHSLSLTEALCGFQFVLTHLDNRQLLIKSNPGEVIKPDQFKGINDEGMPMYQRPFMRGKLYIHFSVDFPDSLTPDQCKALESVLPSRNASRLTDMEIDECEETTMHDVNIEEEMRRKQHQQAQEAYDEDDEGHGGAQRVQCAQQ 418          
BLAST of CN188356 vs. ExPASy Swiss-Prot
Match: DNAJ3_ARATH (Chaperone protein dnaJ 3 OS=Arabidopsis thaliana GN=ATJ3 PE=1 SV=2)

HSP 1 Score: 305.834 bits (782), Expect = 1.604e-82
Identity = 148/178 (83.15%), Postives = 161/178 (90.45%), Query Frame = -3
Query:  219 DEAPDTVTGDIVFVLQQKEHPKFKRKGEDLFYEHTLSLTEALCGFQFALTHLDGRQLLIKSNPGEVVKPDSYKAINEEGMPLYQRPFMKGKLYIHFTVEFPDSLTPDQVKALEAILPSRPLSGMTDMELDECEETTLHDVNIEEEMRRKQAHAQEAY---EEDEDMPGGAQRVQCAQQ 743
            DEAPDTVTGDIVFVLQQKEHPKFKRKGEDLF EHTLSLTEALCGFQF LTHLDGR LLIKSNPGEVVKPDSYKAI++EGMP+YQRPFMKGKLYIHFTVEFPDSL+PDQ KALEA+LP    + ++DME+DECEETTLHDVNIE+EMRRK    +EAY   +ED+D PGGAQRVQCAQQ
Sbjct:  243 DEAPDTVTGDIVFVLQQKEHPKFKRKGEDLFVEHTLSLTEALCGFQFVLTHLDGRSLLIKSNPGEVVKPDSYKAISDEGMPIYQRPFMKGKLYIHFTVEFPDSLSPDQTKALEAVLPKPSTAQLSDMEIDECEETTLHDVNIEDEMRRKAQAQREAYDDDDEDDDHPGGAQRVQCAQQ 420          
BLAST of CN188356 vs. ExPASy Swiss-Prot
Match: DNJH_CUCSA (DnaJ protein homolog OS=Cucumis sativus GN=DNAJ1 PE=2 SV=1)

HSP 1 Score: 303.523 bits (776), Expect = 7.961e-82
Identity = 148/175 (84.57%), Postives = 159/175 (90.86%), Query Frame = -3
Query:  219 DEAPDTVTGDIVFVLQQKEHPKFKRKGEDLFYEHTLSLTEALCGFQFALTHLDGRQLLIKSNPGEVVKPDSYKAINEEGMPLYQRPFMKGKLYIHFTVEFPDSLTPDQVKALEAILPSRPLSGMTDMELDECEETTLHDVNIEEEMRRKQAHAQEAYEEDEDMPGGAQRVQCAQQ 743
            DEAPDTVTGDIVFVLQQKEHPKFKRKG+DLF EHTLSL E+LCGFQF LTHLDGRQLLIKS PGEVVKPD +KAIN+EGMP+YQRPFMKGKLYIHF+VEFPDSL P+Q KALE +LP R    ++DMELDECEETTLHDVNIEEEMRRKQ  AQEAY+EDEDM GGAQRVQCAQQ
Sbjct:  241 DEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLVESLCGFQFILTHLDGRQLLIKSLPGEVVKPDQFKAINDEGMPMYQRPFMKGKLYIHFSVEFPDSLNPEQCKALEGVLPPRTSVQLSDMELDECEETTLHDVNIEEEMRRKQ--AQEAYDEDEDMHGGAQRVQCAQQ 413          
BLAST of CN188356 vs. ExPASy Swiss-Prot
Match: DNJH1_ALLPO (DnaJ protein homolog 1 (Fragment) OS=Allium porrum GN=DNAJ1 PE=2 SV=1)

HSP 1 Score: 301.597 bits (771), Expect = 3.025e-81
Identity = 143/176 (81.25%), Postives = 160/176 (90.91%), Query Frame = -3
Query:  219 DEAPDTVTGDIVFVLQQKEHPKFKRKGEDLFYEHTLSLTEALCGFQFALTHLDGRQLLIKSNPGEVVKPDSYKAINEEGMPLYQRPFMKGKLYIHFTVEFPDSLTPDQVKALEAILPSRPLSGMTDMELDECEETTLHDVNIEEEMRRKQ-AHAQEAYEEDEDMPGGAQRVQCAQQ 743
            DEAPDTVTGDIVFVLQQKEHPKF+RKG+DLFY+HTLSLTEALCGFQF LTHLDGRQLLIKSNPGEVVKPD +KAIN+EGMP+YQRPFM+GKLYI F V+FPDSLTPDQ K +E++LP    S +TDME+DECEETT+HDVNIEEEMRRKQ  HAQEAY+ED++  GG QRVQCAQQ
Sbjct:  222 DEAPDTVTGDIVFVLQQKEHPKFQRKGDDLFYKHTLSLTEALCGFQFVLTHLDGRQLLIKSNPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIQFLVDFPDSLTPDQCKVIESVLPRSASSQLTDMEIDECEETTMHDVNIEEEMRRKQHQHAQEAYDEDDEGHGGGQRVQCAQQ 397          
BLAST of CN188356 vs. ExPASy Swiss-Prot
Match: DNJH_ATRNU (DnaJ protein homolog ANJ1 OS=Atriplex nummularia PE=2 SV=1)

HSP 1 Score: 300.827 bits (769), Expect = 5.160e-81
Identity = 148/176 (84.09%), Postives = 159/176 (90.34%), Query Frame = -3
Query:  219 DEAPDTVTGDIVFVLQQKEHPKFKRKGEDLFYEHTLSLTEALCGFQFALTHLDGRQLLIKSNPGEVVKPDSYKAINEEGMPLYQRPFMKGKLYIHFTVEFPDSLTPDQVKALEAILPSRPLSGMTDMELDECEETTLHDVNIEEEMRRKQAHA-QEAYEEDEDMPGGAQRVQCAQQ 743
            DEAPDTVTGDIVFVLQQKEHPKFKRKGEDLFYEHTLSLTEALCGF+F LTHLDGRQLLIKSN GEVVKPD +KAI +EGMP+YQRPFMKGK+YIHFTVEFPDSL PDQVK+LEAILP +P   +T MELDECEETTLH+VNIEEEM+RKQ  A QEAY+ED D P G QRVQCAQQ
Sbjct:  243 DEAPDTVTGDIVFVLQQKEHPKFKRKGEDLFYEHTLSLTEALCGFRFVLTHLDGRQLLIKSNLGEVVKPDQFKAIEDEGMPIYQRPFMKGKMYIHFTVEFPDSLNPDQVKSLEAILPPKPSMSLTYMELDECEETTLHNVNIEEEMKRKQTQAQQEAYDED-DEPAGGQRVQCAQQ 417          
BLAST of CN188356 vs. ExPASy Swiss-Prot
Match: DNAJ2_ARATH (Chaperone protein dnaJ 2 OS=Arabidopsis thaliana GN=ATJ2 PE=1 SV=2)

HSP 1 Score: 296.975 bits (759), Expect = 7.451e-80
Identity = 141/176 (80.11%), Postives = 160/176 (90.91%), Query Frame = -3
Query:  219 DEAPDTVTGDIVFVLQQKEHPKFKRKGEDLFYEHTLSLTEALCGFQFALTHLDGRQLLIKSNPGEVVKPDSYKAINEEGMPLYQRPFMKGKLYIHFTVEFPDSLTPDQVKALEAILPSRPLSGMTDMELDECEETTLHDVNIEEEMRRKQAHAQEAYEED-EDMPGGAQRVQCAQQ 743
            DEAPDTVTGDIVFV+QQKEHPKFKRKGEDLF EHT+SLTEALCGFQF LTHLD RQLLIKS PGEVVKPDSYKAI++EGMP+YQRPFMKGKLYIHFTVEFP+SL+PDQ KA+EA+LP    + ++DME+D+CEETTLHDVNIE+EM+RK    +EAY++D ED PGGAQRVQCAQQ
Sbjct:  244 DEAPDTVTGDIVFVIQQKEHPKFKRKGEDLFVEHTISLTEALCGFQFVLTHLDKRQLLIKSKPGEVVKPDSYKAISDEGMPIYQRPFMKGKLYIHFTVEFPESLSPDQTKAIEAVLPKPTKAAISDMEIDDCEETTLHDVNIEDEMKRKAQAQREAYDDDEEDHPGGAQRVQCAQQ 419          
BLAST of CN188356 vs. ExPASy Swiss-Prot
Match: DNJA2_HUMAN (DnaJ homolog subfamily A member 2 OS=Homo sapiens GN=DNAJA2 PE=1 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 5.233e-33
Identity = 75/177 (42.37%), Postives = 103/177 (58.19%), Query Frame = -3
Query:  219 DEAPDTVTGDIVFVLQQKEHPKFKRKGEDLFYEHTLSLTEALCGFQFALTHLDGRQLLIKSNPGEVVKPDSYKAINEEGMPLYQRPFMKGKLYIHFTVEFPDS--LTPDQVKALEAILPSRPLSGMTDMELDECEETTLHDVNIEEEMRRKQAHAQEAYEEDEDMPGGAQRVQCAQQ 743
            D+AP    GDIV +LQ+KEH  F+R G DL   + + L EALCGFQF   HLDGRQ+++K  PG+V++P   + +  EGMP Y+ PF KG LYI F V+FP++  + PD++  LE +LPSRP       E +E E             +R++A+   + EE     G    VQCA Q
Sbjct:  238 DQAPGVEPGDIVLLLQEKEHEVFQRDGNDLHMTYKIGLVEALCGFQFTFKHLDGRQIVVKYPPGKVIEPGCVRVVRGEGMPQYRNPFEKGDLYIKFDVQFPENNWINPDKLSELEDLLPSRPEVPNIIGETEEVELQEFDSTRGSGGGQRREAYNDSSDEESSSHHGPG--VQCAHQ 412          
BLAST of CN188356 vs. ExPASy Swiss-Prot
Match: DNJA2_BOVIN (DnaJ homolog subfamily A member 2 OS=Bos taurus GN=DNAJA2 PE=2 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 1.166e-32
Identity = 74/177 (41.81%), Postives = 103/177 (58.19%), Query Frame = -3
Query:  219 DEAPDTVTGDIVFVLQQKEHPKFKRKGEDLFYEHTLSLTEALCGFQFALTHLDGRQLLIKSNPGEVVKPDSYKAINEEGMPLYQRPFMKGKLYIHFTVEFPDS--LTPDQVKALEAILPSRPLSGMTDMELDECEETTLHDVNIEEEMRRKQAHAQEAYEEDEDMPGGAQRVQCAQQ 743
            D+AP    GDIV +LQ+KEH  F+R G DL   + + L EALCGFQF   HLDGRQ+++K  PG+V++P   + +  EGMP Y+ PF KG LYI F V+FP++  + PD++  LE +LPSRP       + +E E             +R++A+   + EE     G    VQCA Q
Sbjct:  238 DQAPGVEPGDIVLLLQEKEHEVFQRDGNDLHMTYKIGLVEALCGFQFTFKHLDGRQIVVKYPPGKVIEPGCVRVVRGEGMPQYRNPFEKGDLYIKFDVQFPENNWINPDKLSELEDLLPSRPEVPNIIGDTEEVELQEFDSTRGSGGGQRREAYNDSSDEESSSHHGPG--VQCAHQ 412          
BLAST of CN188356 vs. ExPASy Swiss-Prot
Match: DNJA2_MOUSE (DnaJ homolog subfamily A member 2 OS=Mus musculus GN=Dnaja2 PE=1 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 1.988e-32
Identity = 74/177 (41.81%), Postives = 102/177 (57.63%), Query Frame = -3
Query:  219 DEAPDTVTGDIVFVLQQKEHPKFKRKGEDLFYEHTLSLTEALCGFQFALTHLDGRQLLIKSNPGEVVKPDSYKAINEEGMPLYQRPFMKGKLYIHFTVEFPDS--LTPDQVKALEAILPSRPLSGMTDMELDECEETTLHDVNIEEEMRRKQAHAQEAYEEDEDMPGGAQRVQCAQQ 743
            D+AP    GDIV +LQ+KEH  F+R G DL   + + L EALCGFQF   HLD RQ+++K  PG+V++P   + +  EGMP Y+ PF KG LYI F V+FP++  + PD++  LE +LPSRP       E +E E             +R++A+   + EE     G    VQCA Q
Sbjct:  238 DQAPGVEPGDIVLLLQEKEHEVFQRDGNDLHMTYKIGLVEALCGFQFTFKHLDARQIVVKYPPGKVIEPGCVRVVRGEGMPQYRNPFEKGDLYIKFDVQFPENNWINPDKLSELEDLLPSRPEVPNVIGETEEVELQEFDSTRGSGGGQRREAYNDSSDEESSSHHGPG--VQCAHQ 412          
BLAST of CN188356 vs. ExPASy Swiss-Prot
Match: DNJA1_RAT (DnaJ homolog subfamily A member 1 OS=Rattus norvegicus GN=Dnaja1 PE=2 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 3.392e-32
Identity = 76/174 (43.68%), Postives = 107/174 (61.49%), Query Frame = -3
Query:  228 DEAPDTVTGDIVFVLQQKEHPKFKRKGEDLFYEHTLSLTEALCGFQFALTHLDGRQLLIKSNPGEVVKPDSYKAINEEGMPLYQRPFMKGKLYIHFTVEFPDS--LTPDQVKALEAILPSRPLSGMTDMELDECEETTLHDVNIEEEMRRKQAHAQEAYEEDEDMPGGAQRVQC 743
            D+ P    GDI+ VL QK+H  F R+GEDLF    + L EALCGFQ  ++ LD R ++I S+PG++VK    K +  EGMP+Y+RP+ KG+L I F V FP++  L+PD++  LE +LP R     TD E+D+ E      V+ +    R++ +  EAYE+DE  P G   VQC
Sbjct:  229 DQEPGLEPGDIIIVLDQKDHAVFTRRGEDLFMCMDIQLVEALCGFQKPISTLDNRTIVITSHPGQIVKHGDIKCVLNEGMPIYRRPYEKGRLIIEFKVNFPENGFLSPDKLSLLEKLLPERKEVEETD-EMDQVEL-----VDFDPNQERRRHYNGEAYEDDEHHPRGG--VQC 394          
The following BLAST results are available for this feature:
BLAST of CN188356 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 43
Match NameE-valueIdentityDescription
DNJH2_ALLPO4.221e-8382.95DnaJ protein homolog 2 OS=Allium porrum GN=LDJ2 PE... [more]
DNAJ3_ARATH1.604e-8283.15Chaperone protein dnaJ 3 OS=Arabidopsis thaliana G... [more]
DNJH_CUCSA7.961e-8284.57DnaJ protein homolog OS=Cucumis sativus GN=DNAJ1 P... [more]
DNJH1_ALLPO3.025e-8181.25DnaJ protein homolog 1 (Fragment) OS=Allium porrum... [more]
DNJH_ATRNU5.160e-8184.09DnaJ protein homolog ANJ1 OS=Atriplex nummularia P... [more]
DNAJ2_ARATH7.451e-8080.11Chaperone protein dnaJ 2 OS=Arabidopsis thaliana G... [more]
DNJA2_HUMAN5.233e-3342.37DnaJ homolog subfamily A member 2 OS=Homo sapiens ... [more]
DNJA2_BOVIN1.166e-3241.81DnaJ homolog subfamily A member 2 OS=Bos taurus GN... [more]
DNJA2_MOUSE1.988e-3241.81DnaJ homolog subfamily A member 2 OS=Mus musculus ... [more]
DNJA1_RAT3.392e-3243.68DnaJ homolog subfamily A member 1 OS=Rattus norveg... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0005O11_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0005O11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188356 ID=CN188356; Name=CN188356; organism=Citrus sinensis; type=EST; length=757bp
TTTTTTTTTTTTTTTTTAAAAGAAGGCATTTCATTGCTTTAAAAAAATCT
AGTAAACAAAAAACACTGCAAACATCAAAGCGTCCACAGCTTTGAGCATC
AGACACATGTGCTATTCAAATTATCTTTCCTTAGTAAATAGGTACTGAAA
TTTAGCTTCATTTTAGTAAGCGTACAACAACTTAAACCACTTTCAATGAT
TGTTCTTCGCCATCATCACTGTTGGGCACACTGCACTCTCTGGGCACCAC
CAGGCATATCTTCGTCCTCCTCATATGCCTCTTGAGCATGAGCCTGCTTC
CTCCGCATCTCCTCCTCAATGTTGACATCATGCAATGTAGTCTCTTCACA
TTCATCTAGCTCCATGTCAGTCATCCCAGACAATGGCCTCGATGGGAGGA
TGGCCTCTAGGGCCTTAACCTGATCTGGGGTCAGAGAATCAGGGAATTCA
ACTGTGAAGTGAATGTACAGTTTCCCCTTCATGAACGGCCTCTGGTACAA
GGGCATACCCTCCTCATTGATAGCCTTGTATGAATCAGGCTTAACAACTT
CCCCAGGATTCGATTTAATCAGAAGTTGCCTCCCATCCAGATGAGTCAGT
GCAAACTGGAAACCGCAGAGGGCCTCAGTTAGCGACAAAGTATGCTCATA
AAAGAGATCTTCTCCCTTTCTCTTGAACTTTGGATGTTCCTTCTGCTGAA
GTACAAATACTATGTCTCCAGTGACTGTATCCGGCGCTTCATCTGGCTTC
ACCAGGG
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