EG358196

Overview
NameEG358196
Unique NameEG358196
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length463
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EG358196 vs. ExPASy Swiss-Prot
Match: CYB5_TOBAC (Cytochrome b5 OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 2.221e-15
Identity = 47/116 (40.52%), Postives = 68/116 (58.62%), Query Frame = 3
Query:   12 AGQVLNVTRFLEEHPGGEEVLMEAAGKDATKQFEEIGHSKAAHELLFNYRVGVLQGYKLEDTETS----NNASFQEPKKKEMEAFVVKDNGVPKYAALLEFFVPLLVAGSYFAYRY 347
            +G+V +VT+FL++HPGG+EVL+ A GKDAT  FE++GHS +A  +L  Y VG +    +  T+T     N   + + K  E   FVVK         LL+F VPL++ G  F  R+
Sbjct:   27 SGKVYDVTKFLDDHPGGDEVLLSATGKDATDDFEDVGHSSSARAMLDEYYVGDIDSATI-PTKTKYTPPNQPHYNQDKTSE---FVVK---------LLQFLVPLIILGVAFGIRF 129          
BLAST of EG358196 vs. ExPASy Swiss-Prot
Match: CYB5S_TOBAC (Cytochrome b5, seed isoform OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 3.789e-15
Identity = 43/112 (38.39%), Postives = 61/112 (54.46%), Query Frame = 3
Query:   12 AGQVLNVTRFLEEHPGGEEVLMEAAGKDATKQFEEIGHSKAAHELLFNYRVGVLQGYKLEDTETSNNASFQEPKKKEMEAFVVKDNGVPKYAALLEFFVPLLVAGSYFAYRY 347
            +G+V NVT+FLE+HPGG EVL+ A GKDAT  FE+IGHS +A  +L  Y VG      ++ +       +  PK+        +D        LL+F VPL++ G  F   +
Sbjct:   27 SGKVYNVTKFLEDHPGGGEVLLSATGKDATDDFEDIGHSSSARAMLDEYYVG-----DIDSSTIPTKVKYTPPKQPHYN----QDKTTEFIVKLLQFLVPLIILGVAFGVHF 129          
BLAST of EG358196 vs. ExPASy Swiss-Prot
Match: CYB52_ARATH (Probable cytochrome b5 isoform 2 OS=Arabidopsis thaliana GN=At2g32720 PE=1 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 1.102e-14
Identity = 40/104 (38.46%), Postives = 61/104 (58.65%), Query Frame = 3
Query:   15 GQVLNVTRFLEEHPGGEEVLMEAAGKDATKQFEEIGHSKAAHELLFNYRVGVLQGYKLEDTETSNNASFQEPKKKEMEAFVVKDNGVPKYAALLEFFVPLLVAG 326
            G+V NVT+FLE+HPGG++VL+ + GKDAT  FE++GHS++A E++  Y VG     +++ T       +  PK+        +D        LL+F VPL + G
Sbjct:   28 GKVYNVTKFLEDHPGGDDVLLSSTGKDATDDFEDVGHSESAREMMEQYYVG-----EIDPTTIPKKVKYTPPKQPHYN----QDKTSEFIIKLLQFLVPLAILG 122          
BLAST of EG358196 vs. ExPASy Swiss-Prot
Match: CYB5_BOROF (Cytochrome b5 OS=Borago officinalis PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 9.332e-14
Identity = 42/116 (36.21%), Postives = 64/116 (55.17%), Query Frame = 3
Query:   15 GQVLNVTRFLEEHPGGEEVLMEAAGKDATKQFEEIGHSKAAHELLFNYRVGVLQGYKLEDTETSNNASFQEPKK-----KEMEAFVVKDNGVPKYAALLEFFVPLLVAGSYFAYRY 347
            G+V +VT+FLE+HPGG++VL+ A GKDAT  FE+IGHS +A  +L  Y VG      ++ +   +   +  PK+      +   FV+K         LL+F VPL++       R+
Sbjct:   25 GKVYDVTKFLEDHPGGDDVLLSATGKDATDDFEDIGHSSSAKAMLDEYYVG-----DIDSSSIPSQVKYTPPKQPLYNPDKTREFVIK---------LLQFLVPLVILAGAIGIRF 126          
BLAST of EG358196 vs. ExPASy Swiss-Prot
Match: CYB51_ARATH (Cytochrome b5 isoform 1 OS=Arabidopsis thaliana GN=At5g53560 PE=2 SV=2)

HSP 1 Score: 74.7146 bits (182), Expect = 2.079e-13
Identity = 38/115 (33.04%), Postives = 65/115 (56.52%), Query Frame = 3
Query:   12 AGQVLNVTRFLEEHPGGEEVLMEAAGKDATKQFEEIGHSKAAHELLFNYRVGVLQGYKLEDTET---SNNASFQEPKKKEMEAFVVKDNGVPKYAALLEFFVPLLVAGSYFAYRY 347
            +G+V +VT F+++HPGG+EVL+ + GKDAT  FE++GHS  A +++  Y +G +    +  T T       ++ + K  E   F++K         +L+F VP+L+ G     R+
Sbjct:   27 SGKVYDVTPFMDDHPGGDEVLLSSTGKDATNDFEDVGHSDTARDMMDKYFIGEIDSSSVPATRTYVAPQQPAYNQDKTPE---FIIK---------ILQFLVPILILGLALVVRH 129          
BLAST of EG358196 vs. ExPASy Swiss-Prot
Match: CYB5_CANTR (Cytochrome b5 OS=Candida tropicalis GN=Cytb5 PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 3.546e-13
Identity = 31/71 (43.66%), Postives = 52/71 (73.24%), Query Frame = 3
Query:   15 GQVLNVTRFLEEHPGGEEVLMEAAGKDATKQFEEIGHSKAAHELLFNYRVGVLQGYKLEDTETSNNASFQE 227
            G+V N++ +++EHPGGEEV+++ AG DAT+ F++IGHS  AHE+L    +G L+G K+ + + + + S +E
Sbjct:   31 GKVYNISNYIDEHPGGEEVILDCAGTDATEAFDDIGHSDEAHEILEKLYIGNLKGAKIVEAKHAQSFSTEE 101          
BLAST of EG358196 vs. ExPASy Swiss-Prot
Match: CYB5B_PONAB (Cytochrome b5 type B OS=Pongo abelii GN=CYB5B PE=2 SV=2)

HSP 1 Score: 72.7886 bits (177), Expect = 7.900e-13
Identity = 38/99 (38.38%), Postives = 56/99 (56.57%), Query Frame = 3
Query:   15 GQVLNVTRFLEEHPGGEEVLMEAAGKDATKQFEEIGHSKAAHELLFNYRVGVLQGYKLEDTETSNNASFQEPKKKEMEAFVVKDNGVPKYAALLEFFVP 311
            G+V +VTRFL EHPGGEEVL+E AG DA++ FE++GHS  A E+L  Y +G +    L+    S + S  +  K     +++   G      L  ++ P
Sbjct:   43 GRVYDVTRFLNEHPGGEEVLLEQAGVDASESFEDVGHSSDAREMLKQYYIGDIHPSDLKPENGSKDPSKNDTCKSCWAYWILPIIGAVLLGFLYRYYTP 141          
BLAST of EG358196 vs. ExPASy Swiss-Prot
Match: CYB5B_MOUSE (Cytochrome b5 type B OS=Mus musculus GN=Cyb5b PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 7.900e-13
Identity = 37/74 (50.00%), Postives = 49/74 (66.22%), Query Frame = 3
Query:   15 GQVLNVTRFLEEHPGGEEVLMEAAGKDATKQFEEIGHSKAAHELLFNYRVGVLQGYKL----EDTETSNNASFQ 224
            G+V ++TRFL EHPGGEEVL+E AG DAT+ FE++GHS  A E+L  Y +G +    L    +D + S N S Q
Sbjct:   43 GRVYDITRFLSEHPGGEEVLLEQAGADATESFEDVGHSPDAREMLKQYYIGDVHPSDLKPKGDDKDPSKNNSCQ 116          
BLAST of EG358196 vs. ExPASy Swiss-Prot
Match: CYB5B_RAT (Cytochrome b5 type B OS=Rattus norvegicus GN=Cyb5b PE=1 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 1.032e-12
Identity = 37/74 (50.00%), Postives = 49/74 (66.22%), Query Frame = 3
Query:   15 GQVLNVTRFLEEHPGGEEVLMEAAGKDATKQFEEIGHSKAAHELLFNYRVGVLQGYKLE----DTETSNNASFQ 224
            G+V ++TRFL EHPGGEEVL+E AG DAT+ FE++GHS  A E+L  Y +G +    L+    D + S N S Q
Sbjct:   43 GRVYDITRFLSEHPGGEEVLLEQAGADATESFEDVGHSPDAREMLKQYYIGDVHPNDLKPKDGDKDPSKNNSCQ 116          
BLAST of EG358196 vs. ExPASy Swiss-Prot
Match: CYB5_MUSDO (Cytochrome b5 OS=Musca domestica GN=Cyt-b5 PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 1.348e-12
Identity = 34/74 (45.95%), Postives = 48/74 (64.86%), Query Frame = 3
Query:   21 VLNVTRFLEEHPGGEEVLMEAAGKDATKQFEEIGHSKAAHELLFNYRVGVLQGYKLEDTETSNNASFQEPKKKE 242
            V +VT FL EHPGGEEVL+E AGKDAT+ FE++GHS  A E++  Y+VG L   +  +    +  ++   +K E
Sbjct:   31 VYDVTAFLNEHPGGEEVLIEQAGKDATEHFEDVGHSSDAREMMKQYKVGELVAEERSNVPEKSEPTWNTEQKTE 104          
The following BLAST results are available for this feature:
BLAST of EG358196 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 20
Match NameE-valueIdentityDescription
CYB5_TOBAC2.221e-1540.52Cytochrome b5 OS=Nicotiana tabacum PE=2 SV=1[more]
CYB5S_TOBAC3.789e-1538.39Cytochrome b5, seed isoform OS=Nicotiana tabacum P... [more]
CYB52_ARATH1.102e-1438.46Probable cytochrome b5 isoform 2 OS=Arabidopsis th... [more]
CYB5_BOROF9.332e-1436.21Cytochrome b5 OS=Borago officinalis PE=2 SV=1[more]
CYB51_ARATH2.079e-1333.04Cytochrome b5 isoform 1 OS=Arabidopsis thaliana GN... [more]
CYB5_CANTR3.546e-1343.66Cytochrome b5 OS=Candida tropicalis GN=Cytb5 PE=3 ... [more]
CYB5B_PONAB7.900e-1338.38Cytochrome b5 type B OS=Pongo abelii GN=CYB5B PE=2... [more]
CYB5B_MOUSE7.900e-1350.00Cytochrome b5 type B OS=Mus musculus GN=Cyb5b PE=1... [more]
CYB5B_RAT1.032e-1250.00Cytochrome b5 type B OS=Rattus norvegicus GN=Cyb5b... [more]
CYB5_MUSDO1.348e-1245.95Cytochrome b5 OS=Musca domestica GN=Cyt-b5 PE=1 SV... [more]

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Properties
Property NameValue
Genbank description5f12 Citrus sinensis flesh suppression subtractive hybridization (SSH) cDNA library Moro nucellare 58-8D-I cultivar Citrus sinensis cDNA clone Cl005f12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EG358196 ID=EG358196; Name=EG358196; organism=Citrus sinensis; type=EST; length=463bp
TTCGAGCGGCCGCCGGGCAGGTACTGAACGTTACAAGGTTCCTGGAAGAA
CACCCAGGAGGAGAGGAAGTGCTGATGGAGGCGGCAGGGAAGGATGCAAC
AAAGCAGTTTGAGGAAATTGGACACAGCAAGGCTGCTCACGAGTTGCTCT
TCAACTACCGGGTGGGTGTTCTTCAAGGTTACAAGTTAGAAGACACAGAA
ACATCCAATAATGCTTCATTCCAGGAGCCCAAAAAGAAAGAGATGGAGGC
TTTTGTCGTCAAGGATAATGGCGTGCCTAAATATGCAGCTCTTCTCGAGT
TCTTTGTGCCACTCTTGGTTGCTGGTTCCTACTTTGCTTACAGGTATCTG
GCCTGAGCCCAGAACATCCTTGACTGGATCATCCGCTTCCTCTTATATGT
CTGCTTGATGAATTGCTGCAAGTCTCGCTGTCAGTAGGCAAGGCAACGAA
TGATTTAACCATG
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