CN188355

Overview
NameCN188355
Unique NameCN188355
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length796
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3979 contig Csv1_Contig3979:151..946. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN188355 vs. ExPASy Swiss-Prot
Match: KPYC_SOYBN (Pyruvate kinase, cytosolic isozyme OS=Glycine max PE=2 SV=1)

HSP 1 Score: 168.318 bits (425), Expect = 4.358e-41
Identity = 101/251 (40.24%), Postives = 145/251 (57.77%), Query Frame = 1
Query:   46 TKIVGTLGPKSRSVDVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVKTTKKLCAVMLDTVGPELQV-VNKSEKAISLKADGSVVLTPDCGQEATSQVLPINFDGLAKSVKKGDTIFIGQYLFTGSETTSVWLEVSEVKGNDVTCVIKNTATLAGSLFTLHASQIRIQLPTLSDKDKEVISSWGVQNKIDFLSLSYTRHAEDVRQAREYLSKLGDLSQTQIFAKIENIEGLTHFDEILQAADGIILS 795
            TKIV TLGP SRSV++    L+AGM+VARF+FS G  +YHQETL NLK A+  T  LCAVMLDT GPE++    K  K I LK    V +T D   +   +++ +++  L   +K G+TI           T ++ +   +     V C  +NTATL G    ++   + + LPTL++KDKE I  WGV NKID ++LS+ R   D+   R+ L         Q+ +K+EN EG+ +FDEIL+  D  +++
Sbjct:   23 TKIVCTLGPASRSVEMTEKLLRAGMNVARFNFSHGTHDYHQETLNNLKTAMHNTGILCAVMLDTKGPEIRTGFLKDGKPIQLKEGQEVTITTDYDIKGDPEMISMSYKKLPVHLKPGNTI------LCSDGTITLTVLSCDPDAGTVRCRCENTATL-GERKNVNLPGVVVDLPTLTEKDKEDILGWGVPNKIDMIALSFVRKGSDLVNVRKVLGP--HAKNIQLMSKVENQEGVLNFDEILRETDAFMVA 264          
BLAST of CN188355 vs. ExPASy Swiss-Prot
Match: KPYC_SOLTU (Pyruvate kinase, cytosolic isozyme OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 5.692e-41
Identity = 101/251 (40.24%), Postives = 151/251 (60.16%), Query Frame = 1
Query:   46 TKIVGTLGPKSRSVDVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVKTTKKLCAVMLDTVGPELQVVNKSE-KAISLKADGSVVLTPDCGQEATSQVLPINFDGLAKSVKKGDTIFIGQYLFTGSETTSVWLEVSEVKGNDVTCVIKNTATLAGSLFTLHASQIRIQLPTLSDKDKEVISSWGVQNKIDFLSLSYTRHAEDVRQAREYLSKLGDLSQTQIFAKIENIEGLTHFDEILQAADGIILS 795
            TKIV TLGP SR+V ++   L+AGM+VARF+FS G  EYHQETL+NLK A++ T+ LCAVMLDT GPE++    ++ K I LK    + ++ D   +   +++ +++  L   +K G+TI        G+ T +V L      G  V C  +NTATL G    ++   + + LPTL++KDKE I  WGV N ID ++LS+ R   D+   R+ L       + Q+ +K+EN EG+ +FDEIL+  D  +++
Sbjct:   22 TKIVCTLGPSSRTVPMLEKLLRAGMNVARFNFSHGTHEYHQETLDNLKIAMQNTQILCAVMLDTKGPEIRTGFLTDGKPIQLKEGQEITVSTDYTIKGNEEMISMSYKKLVMDLKPGNTILCAD----GTITLTV-LSCDPPSGT-VRCRCENTATL-GERKNVNLPGVVVDLPTLTEKDKEDILEWGVPNNIDMIALSFVRKGSDLVNVRKVLGP--HAKRIQLMSKVENQEGVINFDEILRETDSFMVA 263          
BLAST of CN188355 vs. ExPASy Swiss-Prot
Match: KPYC_ARATH (Probable pyruvate kinase, cytosolic isozyme OS=Arabidopsis thaliana GN=At4g26390 PE=2 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 6.958e-39
Identity = 100/251 (39.84%), Postives = 147/251 (58.57%), Query Frame = 1
Query:   46 TKIVGTLGPKSRSVDVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVKTTKKLCAVMLDTVGPELQV-VNKSEKAISLKADGSVVLTPDCGQEATSQVLPINFDGLAKSVKKGDTIFIGQYLFTGSETTSVWLEVSEVKGNDVTCVIKNTATLAGSLFTLHASQIRIQLPTLSDKDKEVISSWGVQNKIDFLSLSYTRHAEDVRQAREYLSKLGDLSQTQIFAKIENIEGLTHFDEILQAADGIILS 795
            TKIV TLGP SRSV ++   L AGMSVARF+FS G+ EYHQETL+NL+ A+  T  LCAVMLDT GPE++    K  K I LK    + ++ D   +   + + +++  LA+ V  G  I        G+ +  V L   + KG  V C  +NT+ L G    ++   + + LPTL++KDK+ I  WGV N+ID ++LS+ R   D+ Q R+ L K        + +K+EN EG+ +FD+IL  +D  +++
Sbjct:    9 TKIVCTLGPASRSVPMVEKLLMAGMSVARFNFSHGSYEYHQETLDNLRQAMLNTGMLCAVMLDTKGPEIRTGFLKDGKPIQLKQGQEITISTDYDLKGDEKTICMSYKKLAQDVNPGMVILCAD----GTISLKV-LSCDKEKGT-VRCRCENTSML-GERKNVNLPGVVVDLPTLTEKDKQDILEWGVPNQIDMIALSFVRKGSDLVQVRKLLGK--HAKTILLMSKVENQEGVANFDDILINSDAFMIA 250          
BLAST of CN188355 vs. ExPASy Swiss-Prot
Match: KPYC_TOBAC (Pyruvate kinase, cytosolic isozyme OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 9.087e-39
Identity = 96/251 (38.25%), Postives = 148/251 (58.96%), Query Frame = 1
Query:   46 TKIVGTLGPKSRSVDVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVKTTKKLCAVMLDTVGPELQV-VNKSEKAISLKADGSVVLTPDCGQEATSQVLPINFDGLAKSVKKGDTIFIGQYLFTGSETTSVWLEVSEVKGNDVTCVIKNTATLAGSLFTLHASQIRIQLPTLSDKDKEVISSWGVQNKIDFLSLSYTRHAEDVRQAREYLSKLGDLSQTQIFAKIENIEGLTHFDEILQAADGIILS 795
            TKIV TLGP SRSV +I   L+AGM+VARF+FS G+ +YHQET++NL+ A+++T  LCAVMLDT GPE++    K  K + LK    + ++ D   +    ++ +++  LA+ VK    I     L    + T   L   +  G D  C  +NTA L G    ++   + + LPTL+DKDK+ I +WGV N ID ++LS+ R   D+ + R+ L +        + +K+EN EG+ +FD+IL  +D  +++
Sbjct:   20 TKIVCTLGPASRSVPMIEKLLRAGMNVARFNFSHGSHDYHQETIDNLRQAMESTGILCAVMLDTKGPEIRTGFLKDAKPVQLKQGQEITISTDYSIKGDESMICMSYKKLAEDVKPQSVI-----LCADGQITFTVLSCDKENGLD-RCRCENTAVL-GERKNVNLPGVIVDLPTLTDKDKDDILNWGVPNHIDMIALSFVRKGSDLVEVRKLLGE--HAKNILLMSKVENQEGVANFDDILLNSDAFMVA 261          
BLAST of CN188355 vs. ExPASy Swiss-Prot
Match: KPYK1_SALTY (Pyruvate kinase I OS=Salmonella typhimurium GN=pykF PE=3 SV=2)

HSP 1 Score: 149.828 bits (377), Expect = 1.604e-35
Identity = 86/251 (34.26%), Postives = 146/251 (58.17%), Query Frame = 1
Query:   46 TKIVGTLGPKSRSVDVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVKTTKKLCAVMLDTVGPELQVVN-KSEKAISLKADGSVVLTPDCGQEATSQVLPINFDGLAKSVKKGDTIFIGQYLFTGSETTSVWLEVSEVKGNDVTCVIKNTATLAGSLFTLHASQIRIQLPTLSDKDKEVISSWGVQNKIDFLSLSYTRHAEDVRQAREYLSKLGDLSQTQIFAKIENIEGLTHFDEILQAADGIILS 795
            TKIV T+GPK+ S +++S  L AGM+V R +FS G+   H + ++NL+  +  T K  A++LDT GPE++ +  +    +SLKA  +   T D      ++++ + ++G    +  G+T+ +   L        + +EV+ ++GN V C + N   L G    ++   + I LP L++KDK+ +  +G +  +DF++ S+ R   DV + RE+L   G     QI +KIEN EGL +FDEIL+A+DGI+++
Sbjct:    4 TKIVCTIGPKTESEEMLSKMLDAGMNVMRLNFSHGDYAEHGQRIQNLRNVMSKTGKKAAILLDTKGPEIRTIKLEGGNDVSLKAGQTFTFTTDKSVVGNNEIVAVTYEGFTSDLSVGNTVLVDDGL--------IGMEVTAIEGNKVICKVLNNGDL-GENKGVNLPGVSIALPALAEKDKQDL-IFGCEQGVDFVAASFIRKRSDVVEIREHLKAHGG-ENIQIISKIENQEGLNNFDEILEASDGIMVA 243          
BLAST of CN188355 vs. ExPASy Swiss-Prot
Match: KPYK1_SALTI (Pyruvate kinase I OS=Salmonella typhi GN=pykF PE=3 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 1.604e-35
Identity = 86/251 (34.26%), Postives = 146/251 (58.17%), Query Frame = 1
Query:   46 TKIVGTLGPKSRSVDVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVKTTKKLCAVMLDTVGPELQVVN-KSEKAISLKADGSVVLTPDCGQEATSQVLPINFDGLAKSVKKGDTIFIGQYLFTGSETTSVWLEVSEVKGNDVTCVIKNTATLAGSLFTLHASQIRIQLPTLSDKDKEVISSWGVQNKIDFLSLSYTRHAEDVRQAREYLSKLGDLSQTQIFAKIENIEGLTHFDEILQAADGIILS 795
            TKIV T+GPK+ S +++S  L AGM+V R +FS G+   H + ++NL+  +  T K  A++LDT GPE++ +  +    +SLKA  +   T D      ++++ + ++G    +  G+T+ +   L        + +EV+ ++GN V C + N   L G    ++   + I LP L++KDK+ +  +G +  +DF++ S+ R   DV + RE+L   G     QI +KIEN EGL +FDEIL+A+DGI+++
Sbjct:    4 TKIVCTIGPKTESEEMLSKMLDAGMNVMRLNFSHGDYAEHGQRIQNLRNVMSKTGKKAAILLDTKGPEIRTIKLEGGNDVSLKAGQTFTFTTDKSVVGNNEIVAVTYEGFTSDLSVGNTVLVDDGL--------IGMEVTAIEGNKVICKVLNNGDL-GENKGVNLPGVSIALPALAEKDKQDL-IFGCEQGVDFVAASFIRKRSDVVEIREHLKAHGG-ENIQIISKIENQEGLNNFDEILEASDGIMVA 243          
BLAST of CN188355 vs. ExPASy Swiss-Prot
Match: KPYK1_ECOLI (Pyruvate kinase I OS=Escherichia coli (strain K12) GN=pykF PE=1 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 2.316e-34
Identity = 85/251 (33.86%), Postives = 145/251 (57.77%), Query Frame = 1
Query:   46 TKIVGTLGPKSRSVDVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVKTTKKLCAVMLDTVGPELQVVN-KSEKAISLKADGSVVLTPDCGQEATSQVLPINFDGLAKSVKKGDTIFIGQYLFTGSETTSVWLEVSEVKGNDVTCVIKNTATLAGSLFTLHASQIRIQLPTLSDKDKEVISSWGVQNKIDFLSLSYTRHAEDVRQAREYLSKLGDLSQTQIFAKIENIEGLTHFDEILQAADGIILS 795
            TKIV T+GPK+ S ++++  L AGM+V R +FS G+   H + ++NL+  +  T K  A++LDT GPE++ +  +    +SLKA  +   T D      S+++ + ++G    +  G+T+ +   L        + +EV+ ++GN V C + N   L G    ++   + I LP L++KDK+ +  +G +  +DF++ S+ R   DV + RE+L   G      I +KIEN EGL +FDEIL+A+DGI+++
Sbjct:    4 TKIVCTIGPKTESEEMLAKMLDAGMNVMRLNFSHGDYAEHGQRIQNLRNVMSKTGKTAAILLDTKGPEIRTMKLEGGNDVSLKAGQTFTFTTDKSVIGNSEMVAVTYEGFTTDLSVGNTVLVDDGL--------IGMEVTAIEGNKVICKVLNNGDL-GENKGVNLPGVSIALPALAEKDKQDL-IFGCEQGVDFVAASFIRKRSDVIEIREHLKAHGG-ENIHIISKIENQEGLNNFDEILEASDGIMVA 243          
BLAST of CN188355 vs. ExPASy Swiss-Prot
Match: KPYK1_ECO57 (Pyruvate kinase I OS=Escherichia coli O157:H7 GN=pykF PE=3 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 2.316e-34
Identity = 85/251 (33.86%), Postives = 145/251 (57.77%), Query Frame = 1
Query:   46 TKIVGTLGPKSRSVDVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVKTTKKLCAVMLDTVGPELQVVN-KSEKAISLKADGSVVLTPDCGQEATSQVLPINFDGLAKSVKKGDTIFIGQYLFTGSETTSVWLEVSEVKGNDVTCVIKNTATLAGSLFTLHASQIRIQLPTLSDKDKEVISSWGVQNKIDFLSLSYTRHAEDVRQAREYLSKLGDLSQTQIFAKIENIEGLTHFDEILQAADGIILS 795
            TKIV T+GPK+ S ++++  L AGM+V R +FS G+   H + ++NL+  +  T K  A++LDT GPE++ +  +    +SLKA  +   T D      S+++ + ++G    +  G+T+ +   L        + +EV+ ++GN V C + N   L G    ++   + I LP L++KDK+ +  +G +  +DF++ S+ R   DV + RE+L   G      I +KIEN EGL +FDEIL+A+DGI+++
Sbjct:    4 TKIVCTIGPKTESEEMLAKMLDAGMNVMRLNFSHGDYAEHGQRIQNLRNVMSKTGKTAAILLDTKGPEIRTMKLEGGNDVSLKAGQTFTFTTDKSVIGNSEMVAVTYEGFTTDLSVGNTVLVDDGL--------IGMEVTAIEGNKVICKVLNNGDL-GENKGVNLPGVSIALPALAEKDKQDL-IFGCEQGVDFVAASFIRKRSDVIEIREHLKAHGG-ENIHIISKIENQEGLNNFDEILEASDGIMVA 243          
BLAST of CN188355 vs. ExPASy Swiss-Prot
Match: KPYK_DICDI (Pyruvate kinase OS=Dictyostelium discoideum GN=pyk PE=3 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 3.951e-34
Identity = 84/252 (33.33%), Postives = 145/252 (57.54%), Query Frame = 1
Query:   46 TKIVGTLGPKSRSVDVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVKTTKKLCAVMLDTVGPELQVVNKSEKA--ISLKADGSVVLTPDCGQEATSQVLPINFDGLAKSVKKGDTIFIGQYLFTGSETTSVWLEVSEVKGNDVTCVIKNTATLAGSLFTLHASQIRIQLPTLSDKDKEVISSWGVQNKIDFLSLSYTRHAEDVRQAREYLSKLGDLSQTQIFAKIENIEGLTHFDEILQAADGIILS 795
            TKIV T+GPK+ S + +   ++ GM+V R +FS G  +YH + ++N+++A++ T K+ A+MLDT GPE++     ++   + L     +++  +  Q  TS  + I++ GL  SVK      +G Y+       S+ +   E +   V C + N + L G    +H     + LP +S+KD   I  +GV+  +DF++ S+ R A+DV + RE L + G     QI +KIEN+EG+ +F+EIL+ +DGI+++
Sbjct:   22 TKIVCTIGPKTMSEEALIKLIETGMNVCRLNFSHGTHDYHGQVIKNVRSAMEKTGKIIAIMLDTKGPEIRTGKIEDRCGYVDLFVGQEILVDTNMNQPGTSFRISIDYKGLLDSVK------VGGYILIADGVISLSITAVEKEKGHVVCRVNNNSRL-GENKNVHLPGAIVNLPAVSEKDILDI-KFGVEQNVDFIAASFIRKADDVNEIREILGEKG--KDIQIISKIENVEGVDNFNEILEVSDGIMVA 263          
BLAST of CN188355 vs. ExPASy Swiss-Prot
Match: KPYK_BACST (Pyruvate kinase OS=Bacillus stearothermophilus GN=pyk PE=1 SV=2)

HSP 1 Score: 134.42 bits (337), Expect = 6.974e-31
Identity = 87/252 (34.52%), Postives = 140/252 (55.56%), Query Frame = 1
Query:   46 TKIVGTLGPKSRSVDVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVKTTKKLCAVMLDTVGPELQVVNKSEKAISLKADGSVVLTPDCGQEATSQVLPINFDGLAKSVKKGDTIFIGQYLFTGSETTSVWLEVSEV--KGNDVTCVIKNTATLAGSLFTLHASQIRIQLPTLSDKDKEVISSWGVQNKIDFLSLSYTRHAEDVRQAREYLSKLGDLSQTQIFAKIENIEGLTHFDEILQAADGIILS 795
            TKIV T+GP S SVD +   ++AGM+VAR +FS G+ E H   + N++ A K T +  A++LDT GPE++  N    AI LK +GS ++        T + + + +  L   V  G  I +   L +        LEV+ V  +  ++   + N   L      ++   +++ LP +++KD+  I  +G++  IDF++ S+ R A DV + RE L +  D    QI AKIEN EG+ + DEIL+AADG++++
Sbjct:    5 TKIVCTIGPASESVDKLVQLMEAGMNVARLNFSHGDHEEHGRRIANIREAAKRTGRTVAILLDTKGPEIRTHNMENGAIELK-EGSKLVISMSEVLGTPEKISVTYPSLIDDVSVGAKILLDDGLIS--------LEVNAVDKQAGEIVTTVLNGGVLKNKK-GVNVPGVKVNLPGITEKDRADI-LFGIRQGIDFIAASFVRRASDVLEIRELL-EAHDALHIQIIAKIENEEGVANIDEILEAADGLMVA 244          
The following BLAST results are available for this feature:
BLAST of CN188355 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 93
Match NameE-valueIdentityDescription
KPYC_SOYBN4.358e-4140.24Pyruvate kinase, cytosolic isozyme OS=Glycine max ... [more]
KPYC_SOLTU5.692e-4140.24Pyruvate kinase, cytosolic isozyme OS=Solanum tube... [more]
KPYC_ARATH6.958e-3939.84Probable pyruvate kinase, cytosolic isozyme OS=Ara... [more]
KPYC_TOBAC9.087e-3938.25Pyruvate kinase, cytosolic isozyme OS=Nicotiana ta... [more]
KPYK1_SALTY1.604e-3534.26Pyruvate kinase I OS=Salmonella typhimurium GN=pyk... [more]
KPYK1_SALTI1.604e-3534.26Pyruvate kinase I OS=Salmonella typhi GN=pykF PE=3... [more]
KPYK1_ECOLI2.316e-3433.86Pyruvate kinase I OS=Escherichia coli (strain K12)... [more]
KPYK1_ECO572.316e-3433.86Pyruvate kinase I OS=Escherichia coli O157:H7 GN=p... [more]
KPYK_DICDI3.951e-3433.33Pyruvate kinase OS=Dictyostelium discoideum GN=pyk... [more]
KPYK_BACST6.974e-3134.52Pyruvate kinase OS=Bacillus stearothermophilus GN=... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS05_0005O10_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0005O10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188355 ID=CN188355; Name=CN188355; organism=Citrus sinensis; type=EST; length=796bp
GAGGCAATCCTGGAGCCATCCAAAGCCAGTTTCTTCCCGGCAATGACCAA
AATTGTTGGAACGCTTGGTCCTAAATCTCGATCTGTTGATGTTATATCCG
GTTGCCTCAAAGCTGGAATGTCTGTGGCTAGATTCGATTTCTCGTGGGGT
AATACTGAATACCACCAAGAGACCTTGGAGAATCTCAAGGCGGCAGTTAA
GACTACTAAGAAGCTTTGTGCTGTTATGTTGGACACAGTGGGTCCCGAAT
TGCAGGTTGTTAATAAGAGTGAGAAGGCAATTTCACTTAAGGCAGATGGT
TCTGTTGTTCTCACACCTGACTGTGGACAAGAAGCCACTTCTCAAGTTTT
GCCCATCAATTTCGATGGACTTGCTAAGTCAGTGAAGAAAGGAGACACCA
TTTTTATCGGTCAATACTTGTTCACTGGAAGTGAGACTACTTCTGTGTGG
CTGGAGGTTTCTGAAGTGAAAGGAAATGATGTAACTTGTGTGATAAAGAA
TACTGCAACATTGGCTGGTTCACTTTTCACTTTACATGCCTCTCAAATTC
GTATTCAACTGCCAACTCTTTCTGATAAAGATAAGGAGGTCATTAGTTCT
TGGGGAGTTCAAAACAAAATTGACTTCCTCTCATTGTCCTATACGCGACA
TGCAGAAGACGTGCGCCAAGCTCGCGAGTATCTCTCCAAGTTGGGTGACC
TCAGTCAAACTCAAATTTTTGCAAAGATTGAGAATATAGAGGGTTTGACC
CATTTTGATGAGATCCTTCAAGCAGCAGATGGTATTATTCTTTCCC
back to top