CN188350

Overview
NameCN188350
Unique NameCN188350
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length703
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5131 contig Csv1_Contig5131:135..837. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN188350 vs. ExPASy Swiss-Prot
Match: MDAR_SOLLC (Monodehydroascorbate reductase OS=Solanum lycopersicum GN=AFRR PE=1 SV=1)

HSP 1 Score: 372.474 bits (955), Expect = 1.228e-102
Identity = 186/231 (80.52%), Postives = 201/231 (87.01%), Query Frame = 3
Query:    6 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKEKGIELILSTEIVKADIASKTLLSATGLIFKYQILVIATGSTVLRLTDFGVEGADAKNIFYLREIDDADKLVEXXXXXXXXXXXXXXXXYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTN 698
            KSFKYVI+GGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEG ARLPGFHVCVGSGGER LPEWY EKGI LILSTEIVKAD+ASKTL+SA G  FKYQ LVIATG+TVL+L+DFGV+GAD+KNIFYLREIDDAD+LVE                YIGLELSA L++NNI+V+MVYPEPWCMPRLFT  IAAFYEGYY NKG+ IIKGTVAVGF T+
Sbjct:    4 KSFKYVIVGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGAARLPGFHVCVGSGGERQLPEWYAEKGISLILSTEIVKADLASKTLVSAAGESFKYQTLVIATGTTVLKLSDFGVQGADSKNIFYLREIDDADQLVEALKAKKNGKAVVVGGGYIGLELSAVLRLNNIEVNMVYPEPWCMPRLFTEGIAAFYEGYYKNKGVNIIKGTVAVGFDTH 234          
BLAST of CN188350 vs. ExPASy Swiss-Prot
Match: MDAR3_ARATH (Probable monodehydroascorbate reductase, cytoplasmic isoform 3 OS=Arabidopsis thaliana GN=At3g52880 PE=1 SV=1)

HSP 1 Score: 367.081 bits (941), Expect = 5.157e-101
Identity = 181/229 (79.04%), Postives = 201/229 (87.77%), Query Frame = 3
Query:    6 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKEKGIELILSTEIVKADIASKTLLSATGLIFKYQILVIATGSTVLRLTDFGVEGADAKNIFYLREIDDADKLVEXXXXXXXXXXXXXXXXYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFT 692
            KSFKY+ILGGGVSAGYAA+EFA QGV+PGELA+ISKEAVAPYERPALSK YLFPEG ARLPGFH CVGSGGE+LLPE YK+KGIELILSTEIVKAD+++K+L+SATG +FKYQ L+IATGSTVLRLTDFGV+GAD+KNI YLREIDDADKLVE                YIGLELSA L+INN+DV+MV+PEPWCMPRLFTADIAAFYE YY NKG+KIIKGTVA GFT
Sbjct:    4 KSFKYIILGGGVSAGYAAKEFANQGVQPGELAVISKEAVAPYERPALSKGYLFPEGAARLPGFHCCVGSGGEKLLPESYKQKGIELILSTEIVKADLSAKSLVSATGDVFKYQTLIIATGSTVLRLTDFGVKGADSKNILYLREIDDADKLVEAIKAKKGGKAVVVGGGYIGLELSAVLRINNLDVTMVFPEPWCMPRLFTADIAAFYETYYTNKGVKIIKGTVASGFT 232          
BLAST of CN188350 vs. ExPASy Swiss-Prot
Match: MDARS_CUCSA (Monodehydroascorbate reductase, seedling isozyme OS=Cucumis sativus PE=2 SV=1)

HSP 1 Score: 362.844 bits (930), Expect = 9.726e-100
Identity = 180/231 (77.92%), Postives = 198/231 (85.71%), Query Frame = 3
Query:    6 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKEKGIELILSTEIVKADIASKTLLSATGLIFKYQILVIATGSTVLRLTDFGVEGADAKNIFYLREIDDADKLVEXXXXXXXXXXXXXXXXYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTN 698
            ++FKYVILGGGV+AGYAAREF KQG+ PGELAIISKEAVAPYERPALSKAYLFPE  ARLPGFHVCVGSGGERLLP+WYKEKGIELILSTEIV+AD+ +K L SA G I+ YQ L+IATGSTV++L+DFGV+GADAKNIFYLREIDDAD+LVE                YIGLEL AAL+INN DVSMVYPEPWCMPRLFT +IAAFYEGYYA KGI IIKGTVAVGFT +
Sbjct:    4 ETFKYVILGGGVAAGYAAREFVKQGLNPGELAIISKEAVAPYERPALSKAYLFPESPARLPGFHVCVGSGGERLLPDWYKEKGIELILSTEIVEADLPAKRLRSAHGKIYNYQTLIIATGSTVIKLSDFGVQGADAKNIFYLREIDDADQLVEAIKAKENGKVVVVGGGYIGLELGAALRINNFDVSMVYPEPWCMPRLFTPEIAAFYEGYYAQKGITIIKGTVAVGFTVD 234          
BLAST of CN188350 vs. ExPASy Swiss-Prot
Match: MDAR_PEA (Monodehydroascorbate reductase OS=Pisum sativum PE=1 SV=1)

HSP 1 Score: 358.992 bits (920), Expect = 1.404e-98
Identity = 179/231 (77.49%), Postives = 194/231 (83.98%), Query Frame = 3
Query:    9 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKEKGIELILSTEIVKADIASKTLLSATGLIFKYQILVIATGSTVLRLTDFGVEGADAKNIFYLREIDDADKLVEXXXXXXXXXXXXXXXXYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNA 701
            SFKY+I+GGGVSAGYAAREF KQGV PGELAIISKEAVAPYERPALSKAYLFPE  ARLPGFH CVGSGGERLLPEWY EKGI+L LSTEIV AD+A+K L SA G  F YQ LVIATGS V+RLTDFGV GA+AKNIFYLRE+DDADKL E                YIGLELSA LK+N++DV+MVYPEPWCMPRLFT++IAAFYEGYYANKGI IIKGTVAVGFT N+
Sbjct:    4 SFKYIIIGGGVSAGYAAREFVKQGVHPGELAIISKEAVAPYERPALSKAYLFPESPARLPGFHTCVGSGGERLLPEWYSEKGIQLYLSTEIVSADLAAKFLKSANGEHFDYQTLVIATGSAVIRLTDFGVIGANAKNIFYLREVDDADKLYEAIKRKKNAKRVVVGGGYIGLELSAVLKLNDLDVTMVYPEPWCMPRLFTSEIAAFYEGYYANKGINIIKGTVAVGFTANS 234          
BLAST of CN188350 vs. ExPASy Swiss-Prot
Match: MDAR4_ARATH (Probable monodehydroascorbate reductase, cytoplasmic isoform 4 OS=Arabidopsis thaliana GN=At5g03630 PE=1 SV=1)

HSP 1 Score: 332.798 bits (852), Expect = 1.078e-90
Identity = 165/232 (71.12%), Postives = 186/232 (80.17%), Query Frame = 3
Query:    6 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKEKGIELILSTEIVKADIASKTLLSATGLIFKYQILVIATGSTVLRLTDFGVEGADAKNIFYLREIDDADKLVEXXXXXXXXXXXXXXXXYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNA 701
            KSFKYVI+GGGV+AGYAAREF  QGVKPGELAIIS+E V PYERPALSK Y+  E  A LP F+V  G GGER  P+WYKEKGIELIL TEIVKAD+A+KTL+S TG +FKYQ L+ ATGS+V+RL+DFGV GADAKNIFYLRE++DAD L                  YIGLEL AALK NN+DV+MVYPEPWCMPRLFTA IA+FYEGYYANKGI I+KGTVA GFTTN+
Sbjct:    5 KSFKYVIVGGGVAAGYAAREFFNQGVKPGELAIISREQVPPYERPALSKGYIHLENKATLPNFYVAAGIGGERQFPQWYKEKGIELILGTEIVKADLAAKTLVSGTGQVFKYQTLLAATGSSVIRLSDFGVPGADAKNIFYLRELEDADYLAYAMETKEKGKAVVVGGGYIGLELGAALKANNLDVTMVYPEPWCMPRLFTAGIASFYEGYYANKGINIVKGTVASGFTTNS 236          
BLAST of CN188350 vs. ExPASy Swiss-Prot
Match: MDAR1_ARATH (Probable monodehydroascorbate reductase, cytoplasmic isoform 1 OS=Arabidopsis thaliana GN=At3g09940 PE=2 SV=1)

HSP 1 Score: 281.567 bits (719), Expect = 2.850e-75
Identity = 140/233 (60.09%), Postives = 178/233 (76.39%), Query Frame = 3
Query:    6 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKEKGIELILSTEIVKADIASKTLLSATGLIFKYQILVIATGSTVLRLTDFGVEGADAKNIFYLREIDDADKL-VEXXXXXXXXXXXXXXXXYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNA 701
            KS+KYVI+GGGV+ GYAAREF+ QG+KPGELAIISKE V P+ERP L+K Y+  E    L   +VC G+G  +  P WYKEKGI+LI+ TEIVKAD+ASKTL+S  G I+KYQ L+IATGST +RL++ GV+ AD KNIFYLREI+D+D+L +                 ++GLE+S+AL+ NN +V+MV+PEPW + R FTA+IA+FYE YYANKGIKIIKGTVA GF+TN+
Sbjct:    5 KSYKYVIIGGGVAGGYAAREFSNQGLKPGELAIISKEPVPPFERPELTKVYIDLEVNPTLANIYVCAGTGEAKQYPNWYKEKGIDLIVGTEIVKADLASKTLVSDDGKIYKYQTLLIATGSTNIRLSEIGVQEADVKNIFYLREIEDSDELALAMELYVQRGKAVIIGGGFLGLEISSALRANNHEVTMVFPEPWLVHRFFTAEIASFYESYYANKGIKIIKGTVATGFSTNS 237          
BLAST of CN188350 vs. ExPASy Swiss-Prot
Match: MDAR2_ARATH (Probable monodehydroascorbate reductase, cytoplasmic isoform 2 OS=Arabidopsis thaliana GN=At3g27820 PE=2 SV=1)

HSP 1 Score: 259.61 bits (662), Expect = 1.160e-68
Identity = 126/229 (55.02%), Postives = 161/229 (70.31%), Query Frame = 3
Query:    3 GKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKEKGIELILSTEIVKADIASKTLLSATGLIFKYQILVIATGSTVLRLTDFGVEGADAKNIFYLREIDDADKLVEXXXXXXXXXXXXXXXXYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGF 689
            G++F YVILGGGV+AGYAA EF ++GV  GEL IIS+E VAPYERPALSK +L PE  ARLP FH CVG+  E+L P+WYK+ GIEL+L T +   D+  KTLLS+TG    Y+ L+IATG+  L+L +FGVEG+DA+N+ YLR++ DA++L                  YIG+E +A+L IN I+V+MV+PE  CM RLFT  IA+ YE YY  KG+K IKGTV   F
Sbjct:    2 GRAFVYVILGGGVAAGYAALEFTRRGVSDGELCIISEEPVAPYERPALSKGFLLPEAPARLPSFHTCVGANDEKLTPKWYKDHGIELVLGTRVKSVDVRRKTLLSSTGETISYKFLIIATGARALKLEEFGVEGSDAENVCYLRDLADANRLATVIQSSSNGNAVVIGGGYIGMECAASLVINKINVTMVFPEAHCMARLFTPKIASLYEDYYRAKGVKFIKGTVLTSF 230          
BLAST of CN188350 vs. ExPASy Swiss-Prot
Match: MDARP_ARATH (Monodehydroascorbate reductase, chloroplastic OS=Arabidopsis thaliana GN=At1g63940 PE=2 SV=3)

HSP 1 Score: 192.971 bits (489), Expect = 1.333e-48
Identity = 103/221 (46.61%), Postives = 134/221 (60.63%), Query Frame = 3
Query:   15 KYVILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFP--EGTARLPGFHVCVGSGGERLLPEWYKEKGIELILSTEIVKADIASKTLLSATGLIFKYQILVIATGSTVLRLTDFGVEGADAKNIFYLREIDDADKLVEXXXXXXXXXXXXXXXXYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKG 671
            ++VI+GGG +AGYAAR F + G+  G L I++KEA APYERPAL+KAYLFP  +  ARLPGFH CVG GGER  P+WYKEKGIE+I    +  AD   +TL +  G   KY  L+IATG T  R  D    G     + Y+RE+ DAD L+                 YIG+E++AA    N+D ++V+PE   + RLFT  +A  YE  Y   G+K +KG
Sbjct:   62 EFVIVGGGNAAGYAARTFVENGMADGRLCIVTKEAYAPYERPALTKAYLFPPEKKPARLPGFHTCVGGGGERQTPDWYKEKGIEVIYEDPVAGADFEKQTLTTDAGKQLKYGSLIIATGCTASRFPD--KIGGHLPGVHYIREVADADSLI--ASLGKAKKIVIVGGGYIGMEVAAAAVAWNLDTTIVFPEDQLLQRLFTPSLAQKYEELYRQNGVKFVKG 278          
BLAST of CN188350 vs. ExPASy Swiss-Prot
Match: RURE_PSEOL (Rubredoxin-NAD(+) reductase OS=Pseudomonas oleovorans GN=alkT PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 5.652e-15
Identity = 68/218 (31.19%), Postives = 103/218 (47.25%), Query Frame = 3
Query:   21 VILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPE-WYKEKGIELILSTEIVKADIASKTLLSATGLIFKYQILVIATGSTVLRLTDFGVEGADAKNIFYLREIDDAD----KLVEXXXXXXXXXXXXXXXXYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIK 659
            V++G G +   AA    + G K GE+ I S+E+VAPY+RP LSKA+L  E           +      L PE +Y    I + L+T IV  D+  K + S  G  + Y+ L++AT ++  RLT    EG++   + YLR ++DA     KLVE                 IGLE+++A       V+++   P  M R+ T   A         +GI+
Sbjct:    4 VVVGAGTAGVNAAFWLRQYGYK-GEIRIFSRESVAPYQRPPLSKAFLTSE-----------IAESAVPLKPEGFYTNNNITISLNTPIVSIDVGRKIVSSKDGKEYAYEKLILATPASARRLT---CEGSELSGVCYLRSMEDAKNLRRKLVE------SASVVVLGGGVIGLEVASAAVGLGKRVTVIEATPRVMARVVTPAAANLVRARLEAEGIE 200          
BLAST of CN188350 vs. ExPASy Swiss-Prot
Match: YDGE_SCHPO (Putative flavoprotein C26F1.14C OS=Schizosaccharomyces pombe GN=SPAC26F1.14c PE=2 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 1.702e-11
Identity = 63/224 (28.12%), Postives = 97/224 (43.30%), Query Frame = 3
Query:   24 ILGGGVSAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKEKGIELILSTEIVKADIASKTLL--SATGLIFKYQILVIATGSTVLRLTDFGVEGADAKNIFYLREIDDADKLVE-XXXXXXXXXXXXXXXXYIGLELSAALKINNIDVSMVYPEPW--CMPRLFTADIAAFYE----GYYANKGIKIIK 668
            I+GGG  A  AA    ++  K G++ I ++E   PY+RP LSK+ L       L                E+Y +  I    +T++ K D+A K +   S       Y  L++ATG    +L    + G D+KN++ LR I DA KL                   +IGLEL+  LK +N+ V  +   P+   M +     + A +E     +Y    IK +K
Sbjct:  162 IIGGGKGASVAAEYLREKNFK-GKITIFTREDEVPYDRPKLSKSLLHDISKLALRS-------------KEYYDDLDISFHFNTDVTKIDLAEKKIYCGSDEKPTESYTKLILATGGEPNKLP---IPGLDSKNVYLLRSIADASKLAAVTTEAGDKKNIVIIGSSFIGLELAVVLKDHNVSVIGMESIPFEKVMGKEVGTALKALHEQNGIAFYLENSIKEVK 368          
The following BLAST results are available for this feature:
BLAST of CN188350 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 12
Match NameE-valueIdentityDescription
MDAR_SOLLC1.228e-10280.52Monodehydroascorbate reductase OS=Solanum lycopers... [more]
MDAR3_ARATH5.157e-10179.04Probable monodehydroascorbate reductase, cytoplasm... [more]
MDARS_CUCSA9.726e-10077.92Monodehydroascorbate reductase, seedling isozyme O... [more]
MDAR_PEA1.404e-9877.49Monodehydroascorbate reductase OS=Pisum sativum PE... [more]
MDAR4_ARATH1.078e-9071.12Probable monodehydroascorbate reductase, cytoplasm... [more]
MDAR1_ARATH2.850e-7560.09Probable monodehydroascorbate reductase, cytoplasm... [more]
MDAR2_ARATH1.160e-6855.02Probable monodehydroascorbate reductase, cytoplasm... [more]
MDARP_ARATH1.333e-4846.61Monodehydroascorbate reductase, chloroplastic OS=A... [more]
RURE_PSEOL5.652e-1531.19Rubredoxin-NAD(+) reductase OS=Pseudomonas oleovor... [more]
YDGE_SCHPO1.702e-1128.13Putative flavoprotein C26F1.14C OS=Schizosaccharom... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0005O07_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0005O07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188350 ID=CN188350; Name=CN188350; organism=Citrus sinensis; type=EST; length=703bp
GAGGGAAGAGCTTCAAGTACGTGATCCTCGGTGGCGGTGTCTCTGCTGGA
TATGCAGCTAGGGAGTTTGCTAAGCAGGGTGTTAAGCCAGGCGAGCTGGC
AATTATCTCCAAAGAAGCAGTTGCTCCGTATGAGCGTCCAGCACTTAGCA
AGGCATATCTTTTCCCTGAGGGAACTGCTAGACTTCCCGGTTTCCATGTC
TGTGTTGGAAGTGGTGGAGAGAGACTGCTTCCTGAGTGGTACAAAGAGAA
AGGAATTGAATTGATCCTCAGCACGGAAATAGTCAAAGCAGATATTGCTT
CCAAGACTCTCCTTAGTGCAACTGGGCTTATCTTTAAGTACCAGATTTTA
GTAATTGCAACTGGTTCTACAGTTTTACGGTTGACTGATTTTGGTGTTGA
AGGTGCTGATGCCAAAAATATCTTCTACTTAAGAGAAATTGATGATGCTG
ATAAGCTGGTTGAAGCAATAAAAGCAAAGAAGAATGGGAAGGCGGTGGTT
GTTGGAGGAGGATACATTGGTCTTGAGCTTAGTGCAGCTTTAAAAATAAA
TAATATTGATGTTAGCATGGTTTATCCTGAACCATGGTGCATGCCTCGTC
TTTTCACTGCGGATATTGCTGCTTTCTATGAGGGTTATTATGCCAATAAA
GGAATCAAAATTATTAAGGGAACAGTTGCTGTTGGATTTACCACAAATGC
CGA
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