CN188334

Overview
NameCN188334
Unique NameCN188334
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length757
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN188334 vs. ExPASy Swiss-Prot
Match: HS71L_HUMAN (Heat shock 70 kDa protein 1-like OS=Homo sapiens GN=HSPA1L PE=1 SV=2)

HSP 1 Score: 81.2629 bits (199), Expect = 6.473e-15
Identity = 52/154 (33.77%), Postives = 81/154 (52.60%), Query Frame = 1
Query:  271 IAIGIDIGTSQCSIAFWNGSEVELIKNTRNQKVMRSYVTFKDEVPAGGVSTQLSHEHEMLSGAAIFNMKRLIGRVDTDPVVHASKSL-PFLVQTVDIGVRPFIAALVNNAWRSTTPEEVLAIFLVELRAMAETQLKRPIRNVVLTIPVSFSRFQ 729
            IAIGID+GT+   +  +   +VE+I N +  +   SYV F D     G + +  ++  M     +F+ KRLIGR   DPVV A   L PF  Q ++ G +P +        ++  PEE+ ++ L +L+  AE  L  P+ N V+T+P  F+  Q
Sbjct:    7 IAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAK--NQVAMNPQNTVFDAKRLIGRKFNDPVVQADMKLWPF--QVINEGGKPKVLVSYKGENKAFYPEEISSMVLTKLKETAEAFLGHPVTNAVITVPAYFNDSQ 156          
BLAST of CN188334 vs. ExPASy Swiss-Prot
Match: HSP7C_CAEEL (Heat shock 70 kDa protein C OS=Caenorhabditis elegans GN=hsp-3 PE=2 SV=2)

HSP 1 Score: 80.8777 bits (198), Expect = 8.454e-15
Identity = 53/166 (31.93%), Postives = 85/166 (51.20%), Query Frame = 1
Query:  241 EEKTSSPFPEIA--IGIDIGTSQCSIAFWNGSEVELIKNTRNQKVMRSYVTFKDEVPAGGVSTQLSHEHEMLSGAAIFNMKRLIGRVDTDPVVHAS-KSLPFLVQTVDIGVRPFIAALVNNAWRSTTPEEVLAIFLVELRAMAETQLKRPIRNVVLTIPVSFSRFQ 729
            EEKT     +    IGID+GT+   +  +    VE+I N +  ++  SYV F  +     +     ++  +     IF+ KRLIGR   D  V A  K  PF V  +D   +P +   V +  +  TPEEV A+ LV+++ +AE+ L + ++N V+T+P  F+  Q
Sbjct:   22 EEKTEKKETKYGTIIGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFSGDQGDRLIGDAAKNQLTINPENTIFDAKRLIGRDYNDKTVQADIKHWPFKV--IDKSNKPSVEVKVGSDNKQFTPEEVSAMVLVKMKEIAESYLGKEVKNAVVTVPAYFNDAQ 185          
BLAST of CN188334 vs. ExPASy Swiss-Prot
Match: HSP71_RAT (Heat shock 70 kDa protein 1A/1B OS=Rattus norvegicus GN=Hspa1a PE=2 SV=2)

HSP 1 Score: 79.337 bits (194), Expect = 2.460e-14
Identity = 51/153 (33.33%), Postives = 81/153 (52.94%), Query Frame = 1
Query:  274 AIGIDIGTSQCSIAFWNGSEVELIKNTRNQKVMRSYVTFKDEVPAGGVSTQLSHEHEMLSGAAIFNMKRLIGRVDTDPVVHAS-KSLPFLVQTVDIGVRPFIAALVNNAWRSTTPEEVLAIFLVELRAMAETQLKRPIRNVVLTIPVSFSRFQ 729
            AIGID+GT+   +  +   +VE+I N +  +   SYV F D     G + +  ++  +     +F+ KRLIGR   DPVV +  K  PF  Q V+ G +P +        RS  PEE+ ++ L +++ +AE  L  P+ N V+T+P  F+  Q
Sbjct:    6 AIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAK--NQVALNPQNTVFDAKRLIGRKFGDPVVQSDMKHWPF--QVVNDGDKPKVQVNYKGENRSFYPEEISSMVLTKMKEIAEAYLGHPVTNAVITVPAYFNDSQ 154          
BLAST of CN188334 vs. ExPASy Swiss-Prot
Match: HS71L_MACFA (Heat shock 70 kDa protein 1-like OS=Macaca fascicularis GN=HSPA1L PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.460e-14
Identity = 50/154 (32.47%), Postives = 81/154 (52.60%), Query Frame = 1
Query:  271 IAIGIDIGTSQCSIAFWNGSEVELIKNTRNQKVMRSYVTFKDEVPAGGVSTQLSHEHEMLSGAAIFNMKRLIGRVDTDPVVHASKSL-PFLVQTVDIGVRPFIAALVNNAWRSTTPEEVLAIFLVELRAMAETQLKRPIRNVVLTIPVSFSRFQ 729
            IAIGID+GT+   +  +   +VE+I N +  +   SYV F D     G + +  ++  M     +F+ KRLIGR   DPVV +   L PF  Q ++ G +P +        ++  PEE+ ++ L +++  AE  L  P+ N V+T+P  F+  Q
Sbjct:    7 IAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAK--NQVAMNPQNTVFDAKRLIGRKFNDPVVQSDMKLWPF--QVINEGGKPKVLVSYKGENKAFYPEEISSMVLTKMKETAEAFLGHPVTNAVITVPAYFNDSQ 156          
BLAST of CN188334 vs. ExPASy Swiss-Prot
Match: HSP70_TRYCR (Heat shock 70 kDa protein OS=Trypanosoma cruzi GN=HSP70 PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 3.213e-14
Identity = 51/155 (32.90%), Postives = 81/155 (52.26%), Query Frame = 1
Query:  268 EIAIGIDIGTSQCSIAFWNGSEVELIKNTRNQKVMRSYVTFKDEVPAGGVSTQLSHEHEMLSGAAIFNMKRLIGRVDTDPVVHAS-KSLPFLVQTVDIGVRPFIAALVNNAWRSTTPEEVLAIFLVELRAMAETQLKRPIRNVVLTIPVSFSRFQ 729
            E AIGID+GT+   +  W    VE+I N +  +   SYV F D     G + +  ++  M     +F+ KRLIGR  +DPVV +  K  PF V T     +P I        ++  PEEV ++ L +++ +AE+ L + ++  V+T+P  F+  Q
Sbjct:    4 EGAIGIDLGTTYSCVGVWQNERVEIIANDQGNRTTPSYVAFTDSERLIGDAAK--NQVAMNPRNTVFDAKRLIGRKFSDPVVQSDMKHWPFKVITKG-DDKPVIQVQFRGETKTFNPEEVSSMVLSKMKEIAESYLGKQVKKAVVTVPAYFNDSQ 155          
BLAST of CN188334 vs. ExPASy Swiss-Prot
Match: HS7C3_DICDI (Heat shock cognate 70 kDa protein 3 OS=Dictyostelium discoideum GN=DDB_G0293674 PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 3.213e-14
Identity = 48/150 (32.00%), Postives = 79/150 (52.67%), Query Frame = 1
Query:  274 AIGIDIGTSQCSIAFWNGSEVELIKNTRNQKVMRSYVTFKDEVPAGGVSTQLSHEHEMLSGAAIFNMKRLIGRVDTDPVVHAS-KSLPFLVQTVDIGVRPFIAALVNNAWRSTTPEEVLAIFLVELRAMAETQLKRPIRNVVLTIPVSFS 720
            +IGID+GT+   +  W    VE+I N +  +   SYV F D     G + +  ++  M     +F+ KRLIGR  +D VV +  K  PF V T     +P I        ++ +PEE+ ++ L +++  AE+ L +P+ N V+T+P  F+
Sbjct:    3 SIGIDLGTTYSCVGVWLNDRVEIIANDQGNRTTPSYVAFNDTERLIGDAAK--NQVAMNPINTVFDAKRLIGRKFSDSVVQSDMKHWPFKVITNKNDDKPLIQVDFKGETKTFSPEEISSMVLSKMKETAESYLGKPVNNAVITVPAYFN 150          
BLAST of CN188334 vs. ExPASy Swiss-Prot
Match: HS7C2_DICDI (Heat shock cognate 70 kDa protein 2 OS=Dictyostelium discoideum GN=hspE-1 PE=1 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 3.213e-14
Identity = 49/153 (32.03%), Postives = 81/153 (52.94%), Query Frame = 1
Query:  274 AIGIDIGTSQCSIAFWNGSEVELIKNTRNQKVMRSYVTFKDEVPAGGVSTQLSHEHEMLSGAAIFNMKRLIGRVDTDPVVHAS-KSLPFLVQTVDIGVRPFIAALVNNAWRSTTPEEVLAIFLVELRAMAETQLKRPIRNVVLTIPVSFSRFQ 729
            +IGID+GT+   +  W    VE+I N +  +   SYV F +     G + +  ++  M     IF+ KRLIGR  +DPV+ +  K  PF V   + G +P +        ++ +PEEV ++ L++++  AE  L + I N V+T+P  F+  Q
Sbjct:    4 SIGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFNETERLIGDAAK--NQVAMNPTNTIFDAKRLIGRKFSDPVIQSDMKHWPFKVIAKE-GDKPHLQVEFKGEVKTFSPEEVSSMVLLKMKETAEAYLGKTINNAVITVPAYFNDSQ 153          
BLAST of CN188334 vs. ExPASy Swiss-Prot
Match: HS71B_PIG (Heat shock 70 kDa protein 1B OS=Sus scrofa GN=HSPA1B PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 3.213e-14
Identity = 49/154 (31.82%), Postives = 82/154 (53.25%), Query Frame = 1
Query:  271 IAIGIDIGTSQCSIAFWNGSEVELIKNTRNQKVMRSYVTFKDEVPAGGVSTQLSHEHEMLSGAAIFNMKRLIGRVDTDPVVHAS-KSLPFLVQTVDIGVRPFIAALVNNAWRSTTPEEVLAIFLVELRAMAETQLKRPIRNVVLTIPVSFSRFQ 729
            +AIGID+GT+   +  +   +VE+I N +  +   SYV F D     G + +  ++  +     +F+ KRLIGR   DPVV A  K  PF V  ++ G +P +        ++  PEE+ ++ L +++ +AE  L  P+ N V+T+P  F+  Q
Sbjct:    5 VAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAK--NQVALNPQNTVFDAKRLIGRKFGDPVVQADMKHWPFRV--INDGDKPKVQVSYKGETKAFYPEEISSMVLTKMKEIAEAYLGHPVSNAVITVPAYFNDSQ 154          
BLAST of CN188334 vs. ExPASy Swiss-Prot
Match: GRP78_XENLA (78 kDa glucose-regulated protein OS=Xenopus laevis GN=hspa5 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 4.196e-14
Identity = 49/155 (31.61%), Postives = 80/155 (51.61%), Query Frame = 1
Query:  277 IGIDIGTSQCSIAFWNGSEVELIKNTRNQKVMRSYVTFKDE---VPAGGVSTQLSHEHEMLSGAAIFNMKRLIGRVDTDPVVHAS-KSLPFLVQTVDIGVRPFIAALVNNAWRSTTPEEVLAIFLVELRAMAETQLKRPIRNVVLTIPVSFSRFQ 729
            +GID+GT+   +  +    VE+I N +  ++  SYV F  E   +       QL+   E      +F+ KRLIGR   DP V    K LPF V  ++   +P+I   + +  ++  PEE+ A+ LV+++  AE  L R + + V+T+P  F+  Q
Sbjct:   33 VGIDLGTTYSCVGVFKNGRVEIIANDQGNRITPSYVAFTPEGERLIGDAAKNQLTSNPEN----TVFDAKRLIGRTWNDPSVQQDIKYLPFKV--IEKKTKPYIEVDIGDQMKTFAPEEISAMVLVKMKETAEAYLGRKVTHAVVTVPAYFNDAQ 181          
BLAST of CN188334 vs. ExPASy Swiss-Prot
Match: GRP78_APLCA (78 kDa glucose-regulated protein OS=Aplysia californica PE=1 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 4.196e-14
Identity = 57/173 (32.95%), Postives = 84/173 (48.55%), Query Frame = 1
Query:  223 DTETTGEEKTSSPFPEIAIGIDIGTSQCSIAFWNGSEVELIKNTRNQKVMRSYVTFK---DEVPAGGVSTQLSHEHEMLSGAAIFNMKRLIGRV-DTDPVVHASKSLPFLVQTVDIGVRPFIAALVNNAWRSTTPEEVLAIFLVELRAMAETQLKRPIRNVVLTIPVSFSRFQ 729
            D E  G++K S       IGID+GT+   +  +    V++I N +  ++  SYV F    + +       QL+   E      IF++KRLIGR  D   V H  K  PF V   +   +P I A      RS  PEE+ A+ L ++R +AE  L + I N V+T+P  F+  Q
Sbjct:   25 DEEDEGDKKKSEV--GTVIGIDLGTTYSCVGVFKNGRVDIIANDQGNRITPSYVAFTADGERLIGDAAKNQLTSNPEN----TIFDVKRLIGRTFDDKSVQHDIKFYPFKVTNANN--KPHIQAATGEGDRSFAPEEISAMVLSKMRDIAEEYLGKKITNAVVTVPAYFNDAQ 189          
The following BLAST results are available for this feature:
BLAST of CN188334 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 145
Match NameE-valueIdentityDescription
HS71L_HUMAN6.473e-1533.77Heat shock 70 kDa protein 1-like OS=Homo sapiens G... [more]
HSP7C_CAEEL8.454e-1531.93Heat shock 70 kDa protein C OS=Caenorhabditis eleg... [more]
HSP71_RAT2.460e-1433.33Heat shock 70 kDa protein 1A/1B OS=Rattus norvegic... [more]
HS71L_MACFA2.460e-1432.47Heat shock 70 kDa protein 1-like OS=Macaca fascicu... [more]
HSP70_TRYCR3.213e-1432.90Heat shock 70 kDa protein OS=Trypanosoma cruzi GN=... [more]
HS7C3_DICDI3.213e-1432.00Heat shock cognate 70 kDa protein 3 OS=Dictyosteli... [more]
HS7C2_DICDI3.213e-1432.03Heat shock cognate 70 kDa protein 2 OS=Dictyosteli... [more]
HS71B_PIG3.213e-1431.82Heat shock 70 kDa protein 1B OS=Sus scrofa GN=HSPA... [more]
GRP78_XENLA4.196e-1431.6178 kDa glucose-regulated protein OS=Xenopus laevis... [more]
GRP78_APLCA4.196e-1432.9578 kDa glucose-regulated protein OS=Aplysia califo... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0005N21_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0005N21, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188334 ID=CN188334; Name=CN188334; organism=Citrus sinensis; type=EST; length=757bp
AGTAGAACCCGCCTTTTCGTAGAAGTACTAGTTGATAATAATACACATAA
CGAAGTGCTCTCGTTTCGCTTAAAACTGAAAAGCTCTGGCAGTTTCCATT
CCAAGGCTCGATTGCTACTCTTCAGCTTTCTTTGCTTTCTGCTCGCTTTC
TCTAAACAATCTCTAACATTGCAAATCTGTAAAAACACAGGAATGGCTGA
ACCAGCGTACACTGTGGCTTCTGATACTGAAACAACAGGAGAAGAAAAGA
CCTCATCCCCTTTTCCTGAAATTGCAATTGGAATTGACATAGGTACTTCA
CAATGCAGTATTGCATTCTGGAATGGCTCTGAAGTAGAGCTTATTAAGAA
CACAAGAAACCAGAAGGTGATGCGTTCATATGTCACCTTCAAGGATGAAG
TTCCTGCAGGTGGAGTCAGCACTCAACTCTCCCATGAACATGAAATGTTA
TCTGGAGCTGCTATTTTCAACATGAAACGCTTAATCGGCAGAGTTGACAC
CGATCCTGTGGTCCATGCAAGCAAAAGCTTACCGTTTTTGGTCCAAACCG
TGGACATTGGTGTTCGTCCATTTATTGCAGCCTTAGTGAACAATGCGTGG
AGATCCACCACTCCCGAAGAAGTCCTGGCAATATTTTTGGTGGAACTAAG
AGCCATGGCTGAAACTCAGTTGAAACGCCCAATAAGAAATGTTGTTCTAA
CCATTCCAGTTTCATTCAGTCGTTTCCAACTGACACGCATTGAACGAGCA
TGTGCTA
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