CN188308
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN188308 vs. ExPASy Swiss-Prot
Match: HS26M_ARATH (26.5 kDa heat shock protein, mitochondrial OS=Arabidopsis thaliana GN=HSP26.5 PE=2 SV=1) HSP 1 Score: 219.164 bits (557), Expect = 1.903e-56 Identity = 127/240 (52.92%), Postives = 159/240 (66.25%), Query Frame = 2 Query: 47 MALARLALRNVQQRVSTSSPSLANLHNNLGERSASTIGGVQRQKWSNELLKRFMATAAND-EKKQDREVAVTEKXXXXXXXXXXXXXXXXXNND------IPVLAEFFPSGLGNALMQATENINRIFENLNFTPSQLMGRVKEQDDCYKLRYDVPGLGKDDVKITIHDGVLTIKG--XXXXXXXXXXXXXXWSARSYGYYNTSLALPDDAKADEIKAELKNGVLNIVIPRTEKPKQDVKE 739 MALARLALRN+QQ++S PSL +G+ S G+ + + L RFMAT+A + E K + EV+V+EK N P L EFFP +GN L+QATEN+NRIF+N N P QLMG+VKEQDDCYKLRY+VPGL K+DVKIT++DG+LTIKG WS++SYGYYNTSL+LPDDAK ++IKAELKNGVLN+VIPRTEKPK++V+E Sbjct: 1 MALARLALRNLQQKLS---PSL------MGQ---SCERGLVGNRHNPMKLNRFMATSAGEQEDKMNTEVSVSEKKSPRQNFPRRRGRKSLWRNTDDHGYFTPTLNEFFPPTIGNTLIQATENMNRIFDNFNVNPFQLMGQVKEQDDCYKLRYEVPGLTKEDVKITVNDGILTIKGDHKAEEEKGSPEEDEYWSSKSYGYYNTSLSLPDDAKVEDIKAELKNGVLNLVIPRTEKPKKNVQE 228
BLAST of CN188308 vs. ExPASy Swiss-Prot
Match: HS22C_SOYBN (Small heat shock protein, chloroplastic (Fragment) OS=Glycine max GN=HSP22 PE=2 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.274e-17 Identity = 45/124 (36.29%), Postives = 76/124 (61.29%), Query Frame = 2 Query: 368 ALMQATENINRIFENLNFTPSQLMGR--------VKEQDDCYKLRYDVPGLGKDDVKITIHDGVLTIKGXXXXXXXXXXXXXXWSARSYGYYNTSLALPDDAKADEIKAELKNGVLNIVIPRTE 715 ++ Q + ++R+FE+ P + +G +K+++ ++R+D+PGL K+DVK+++ D +L IKG WS+R+Y Y+T L LPD+ + D++KAELKNGVL I IP+T+ Sbjct: 48 SMRQILDTMDRVFEDTMTFPGRNIGGGEIRAPWDIKDEEHEIRMRFDMPGLAKEDVKVSVEDDMLVIKGGHKSEQEHGGDDS-WSSRTYSSYDTRLKLPDNCEKDKVKAELKNGVLYITIPKTK 170
BLAST of CN188308 vs. ExPASy Swiss-Prot
Match: HS23M_ORYSJ (23.6 kDa heat shock protein, mitochondrial OS=Oryza sativa subsp. japonica GN=HSP23.6 PE=2 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 3.878e-17 Identity = 52/143 (36.36%), Postives = 80/143 (55.94%), Query Frame = 2 Query: 335 LAEFFP----SGLGNALMQATENINRIFENLNFTPSQLMGRVKEQDDCYKLRYDVPGLGKDDVKITIHDGVLTIKG----XXXXXXXXXXXXXXWSARSYGYYNTSLALPDDAKADEIKAELKNGVLNIVIPRTEKPKQDVKE 739 L +F P G+G+AL Q E + R L G+V+E ++ Y+LR++VPGLGKDDV++ + DGVL I G W+A + Y+ L LP+DA A+ I AE+++GVL++ +PR+ + K+ V E Sbjct: 86 LRDFVPLRLVDGIGSALSQVAETLTR----------PLTGKVREDEERYRLRFEVPGLGKDDVRVYVDDGVLAIHGEKRDVVEEDRGRDGDGECWAAAT---YHAGLLLPEDAVAEGITAEVRDGVLHVTVPRSPERKRSVTE 215
BLAST of CN188308 vs. ExPASy Swiss-Prot
Match: HS25P_ARATH (25.3 kDa heat shock protein, chloroplastic OS=Arabidopsis thaliana GN=HSP25.3 PE=2 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.514e-16 Identity = 44/90 (48.89%), Postives = 58/90 (64.44%), Query Frame = 2 Query: 446 VKEQDDCYKLRYDVPGLGKDDVKITIHDGVLTIKGXXXXXXXXXXXXXXWSARSYGYYNTSLALPDDAKADEIKAELKNGVLNIVIPRTE 715 +KE++ K+R+D+PGL K+DVKI++ D VL IKG WS RS Y T L LPD+ + D+IKAELKNGVL I IP+T+ Sbjct: 131 IKEEEHEIKMRFDMPGLSKEDVKISVEDNVLVIKGEQKKEDSDDS----WSGRSVSSYGTRLQLPDNCEKDKIKAELKNGVLFITIPKTK 216
BLAST of CN188308 vs. ExPASy Swiss-Prot
Match: HS21C_PEA (Small heat shock protein, chloroplastic OS=Pisum sativum GN=HSP21 PE=2 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 9.552e-16 Identity = 43/124 (34.68%), Postives = 74/124 (59.68%), Query Frame = 2 Query: 368 ALMQATENINRIFENLNFTPSQLMG--------RVKEQDDCYKLRYDVPGLGKDDVKITIHDGVLTIKGXXXXXXXXXXXXXXWSARSYGYYNTSLALPDDAKADEIKAELKNGVLNIVIPRTE 715 ++ Q + ++RIFE+ P + +G +K+++ ++R+D+PG+ K+DVK+++ D VL IK WS +SY Y+T L LPD+ + +++KAELK+GVL I IP+T+ Sbjct: 101 SMRQMLDTMDRIFEDAITIPGRNIGGGEIRVPWEIKDEEHEIRMRFDMPGVSKEDVKVSVEDDVLVIKSDHREENGGEDC---WSRKSYSCYDTRLKLPDNCEKEKVKAELKDGVLYITIPKTK 221
BLAST of CN188308 vs. ExPASy Swiss-Prot
Match: HS22C_PETHY (Small heat shock protein, chloroplastic OS=Petunia hybrida GN=HSP22 PE=2 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 6.192e-15 Identity = 47/128 (36.72%), Postives = 76/128 (59.38%), Query Frame = 2 Query: 371 LMQATENINRIFEN-LNFTPSQLMGR--------VKEQDDCYKLRYDVPGLGKDDVKITIHDGVLTIKGXXXXXXXXXXXXXXWSARSYGYYNTSLALPDDAKADEIKAELKNGVLNIVIPRTEKPKQ 727 + Q + ++R+FE+ + F S+ G +K+ ++ K+R+D+PGL K++VK+++ D VL IKG W R+Y Y+T L+LPD+ D++KAELKNGVL I IP+T+ K+ Sbjct: 110 MRQMMDTMDRLFEDTMTFPGSRNRGTGEIRAPWDIKDDENEIKMRFDMPGLSKEEVKVSVEDDVLVIKGEHKKEESGKDDS--WG-RNYSSYDTRLSLPDNVDKDKVKAELKNGVLLISIPKTKVEKK 234
BLAST of CN188308 vs. ExPASy Swiss-Prot
Match: HS21C_SOLLC (Small heat shock protein, chloroplastic OS=Solanum lycopersicum GN=HSP21 PE=2 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 8.941e-14 Identity = 47/145 (32.41%), Postives = 75/145 (51.72%), Query Frame = 2 Query: 323 DIPVLAEFFPSGLGNALMQATENINRIFENLNFTPSQLMGR----------VKEQDDCYKLRYDVPGLGKDDVKITIHDGVLTIKGXXXXXXXXXXXXXXWSARSYGYYNTSLALPDDAKADEIKAELKNGVLNIVIPRTEKPKQ 727 D+ P + Q + ++R+FE+ P + + + ++ K+R+D+PGL K+DVK+++ + +L IKG W R+Y Y+T L+LPD+ D+IKAELKNGVL I IP+TE K+ Sbjct: 86 DVSPFGVLDPMSPMRTMRQMIDTMDRLFEDTMTFPGRNRASGTGEIRTPWDIHDDENEIKMRFDMPGLSKEDVKVSVENDMLVIKGEHKKEEDGRDKHS-WG-RNYSSYDTRLSLPDNVVKDKIKAELKNGVLFISIPKTEVEKK 228
BLAST of CN188308 vs. ExPASy Swiss-Prot
Match: HS26P_ORYSJ (26.7 kDa heat shock protein, chloroplastic OS=Oryza sativa subsp. japonica GN=HSP26.7 PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 8.368e-12 Identity = 40/130 (30.77%), Postives = 67/130 (51.54%), Query Frame = 2 Query: 371 LMQATENINRIFENLNF----TPSQLMGR--------VKEQDDCYKLRYDVPGLGKDDVKITIHDGVLTIKGXXXXXXXXXXXXXX---WSARSYGYYNTSLALPDDAKADEIKAELKNGVLNIVIPRTE 715 + Q + ++RIF+++ TP + + V E D ++R+D+PGL +++VK+ + D L I+G W RS Y+ LALPD+ +++AELKNGVL + +P+TE Sbjct: 100 MRQMLDTMDRIFDDVALGFPATPRRSLATGEVRMPWDVMEDDKEVRMRFDMPGLSREEVKVMVEDDALVIRGEHKKEEGEGAEGSGDGWWKERSVSSYDMRLALPDECDKSKVRAELKNGVLLVTVPKTE 229
BLAST of CN188308 vs. ExPASy Swiss-Prot
Match: HS23M_ARATH (23.6 kDa heat shock protein, mitochondrial OS=Arabidopsis thaliana GN=HSP23.6 PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 5.424e-11 Identity = 45/142 (31.69%), Postives = 72/142 (50.70%), Query Frame = 2 Query: 344 FFPSGLGNALMQATENINRIFENLNFTPSQLMGR--------VKEQDDCYKLRYDVPGLGKDDVKITIHDGVLTIKGXXXXXXXXXXXXXXWSARSYGYYNTSLALPDDA-KADEIKAELKNGVLNIVIPR-TEKPKQDVKE 739 F P ++ Q +++ EN + ++ MG +KE+DD LR D+PGL ++DVK+ + L I+G + R + + + LPD K DEIKAE+KNGVL +VIP+ E+ + DV++ Sbjct: 69 FDPFSPTRSVSQVLNLMDQFMENPLLSATRGMGASGARRGWDIKEKDDALYLRIDMPGLSREDVKLALEQDTLVIRGEGKNEEDGGEEGESGNRR----FTSRIGLPDKIYKIDEIKAEMKNGVLKVVIPKMKEQERNDVRQ 206
BLAST of CN188308 vs. ExPASy Swiss-Prot
Match: HSP11_CHERU (18.3 kDa class I heat shock protein OS=Chenopodium rubrum GN=HSP18 PE=2 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 9.252e-11 Identity = 34/97 (35.05%), Postives = 53/97 (54.64%), Query Frame = 2 Query: 449 KEQDDCYKLRYDVPGLGKDDVKITIHDG-VLTIKGXXXXXXXXXXXXXXWSARSYGYYNTSLALPDDAKADEIKAELKNGVLNIVIPRTEKPKQDVK 736 KE + + + D+PG+ K++VK+ + DG VL I G RS G + LP++AK D++KA ++NGVL + +P+ E PK VK Sbjct: 60 KETPEAHVFKADLPGVKKEEVKVEVEDGNVLRISGQRAREKEEKNDTWHRVERSSGQFMRKFRLPENAKVDQVKAGMENGVLTVTVPKNEAPKPQVK 156 The following BLAST results are available for this feature:
BLAST of CN188308 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 11
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188308 ID=CN188308; Name=CN188308; organism=Citrus sinensis; type=EST; length=741bpback to top |