CN188283
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188283 vs. ExPASy Swiss-Prot
Match: GOT1B_MOUSE (Vesicle transport protein GOT1B OS=Mus musculus GN=Golt1b PE=2 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 4.902e-17 Identity = 40/88 (45.45%), Postives = 57/88 (64.77%), Query Frame = 1 Query: 361 DKGLLAMGNILFIAGVSLTIGLKSTMQFFMKRQNNKGTISXXXXXXXXXXXWPILGMILETYGFIVLFSGFWPTLSVFLQRIPILGWL 624 DK LLA+GN+LF+AG++ IGL+ T +FF +R K T WP++GMI E YGF +LF GF+P + F++R+P+LG L Sbjct: 31 DKALLAIGNVLFVAGLAFVIGLERTFRFFFQRHKVKATGFFLGGVFVVLIGWPLIGMIFEIYGFFLLFRGFFPVVVGFIRRVPVLGSL 118
BLAST of CN188283 vs. ExPASy Swiss-Prot
Match: GOT1B_HUMAN (Vesicle transport protein GOT1B OS=Homo sapiens GN=GOLT1B PE=1 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 8.362e-17 Identity = 39/88 (44.32%), Postives = 57/88 (64.77%), Query Frame = 1 Query: 361 DKGLLAMGNILFIAGVSLTIGLKSTMQFFMKRQNNKGTISXXXXXXXXXXXWPILGMILETYGFIVLFSGFWPTLSVFLQRIPILGWL 624 DK LLA+GN+LF+AG++ IGL+ T +FF ++ K T WP++GMI E YGF +LF GF+P + F++R+P+LG L Sbjct: 31 DKALLAIGNVLFVAGLAFVIGLERTFRFFFQKHKMKATGFFLGGVFVVLIGWPLIGMIFEIYGFFLLFRGFFPVVVGFIRRVPVLGSL 118
BLAST of CN188283 vs. ExPASy Swiss-Prot
Match: GOT1B_BOVIN (Vesicle transport protein GOT1B OS=Bos taurus GN=GOLT1B PE=2 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 8.362e-17 Identity = 39/88 (44.32%), Postives = 57/88 (64.77%), Query Frame = 1 Query: 361 DKGLLAMGNILFIAGVSLTIGLKSTMQFFMKRQNNKGTISXXXXXXXXXXXWPILGMILETYGFIVLFSGFWPTLSVFLQRIPILGWL 624 DK LLA+GN+LF+AG++ IGL+ T +FF ++ K T WP++GMI E YGF +LF GF+P + F++R+P+LG L Sbjct: 31 DKALLAIGNVLFVAGLAFVIGLERTFRFFFQKHKMKATGFFLGGVFVVLIGWPLIGMIFEIYGFFLLFRGFFPVVVGFIRRVPVLGSL 118
BLAST of CN188283 vs. ExPASy Swiss-Prot
Match: GOT1A_HUMAN (Vesicle transport protein GOT1A OS=Homo sapiens GN=GOLT1A PE=2 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.060e-15 Identity = 45/92 (48.91%), Postives = 52/92 (56.52%), Query Frame = 1 Query: 361 DKGLLAMGNILFIAGVSLTIGLKSTMQFFMKRQNNKGTISXXXXXXXXXXXWPILGMILETYGFIVLFSGFWPTLSVFLQ---RIPILGWLF 627 D LLA GN+LF+ G+SL IGL+ T FF +R KGT WP+LGM LETYGF LF GF+P FL IP LG LF Sbjct: 31 DSVLLAFGNLLFLTGLSLIIGLRKTFWFFFQRHKLKGTSFLLGGVVIVLLRWPLLGMFLETYGFFSLFKGFFPVAFGFLGNVCNIPFLGALF 122
BLAST of CN188283 vs. ExPASy Swiss-Prot
Match: GOT1A_MOUSE (Vesicle transport protein GOT1A OS=Mus musculus GN=Golt1a PE=2 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 3.513e-15 Identity = 44/92 (47.83%), Postives = 53/92 (57.61%), Query Frame = 1 Query: 361 DKGLLAMGNILFIAGVSLTIGLKSTMQFFMKRQNNKGTISXXXXXXXXXXXWPILGMILETYGFIVLFSGFWPTLSVFLQ---RIPILGWLF 627 D LLA GN+LF+ G+SL IGL+ T FF +R KGT WP+LGM+LE YGFI LF GF+P + FL IP L LF Sbjct: 31 DSVLLAFGNLLFLTGLSLIIGLRRTFAFFFQRHKLKGTSFFLGGVAIVLLRWPLLGMLLEAYGFISLFKGFFPVVFGFLGSAFNIPFLSTLF 122
BLAST of CN188283 vs. ExPASy Swiss-Prot
Match: GOT1A_BOVIN (Vesicle transport protein GOT1A OS=Bos taurus GN=GOLT1A PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 7.826e-15 Identity = 44/92 (47.83%), Postives = 51/92 (55.43%), Query Frame = 1 Query: 361 DKGLLAMGNILFIAGVSLTIGLKSTMQFFMKRQNNKGTISXXXXXXXXXXXWPILGMILETYGFIVLFSGFWPTLSVFL---QRIPILGWLF 627 D LLA GN+LF+ G+SL IGL+ T FF +R KGT WP+LGM LETYGF LF GF+P FL IP L LF Sbjct: 31 DSVLLAFGNLLFLTGLSLIIGLRRTFSFFFQRHKFKGTSFFLGGVVIVLLRWPLLGMCLETYGFFSLFRGFFPVAFGFLGSASNIPFLSALF 122
BLAST of CN188283 vs. ExPASy Swiss-Prot
Match: GOT1_CAEEL (Probable Golgi transport protein 1 OS=Caenorhabditis elegans GN=F41C3.4 PE=2 SV=2) HSP 1 Score: 71.633 bits (174), Expect = 3.635e-12 Identity = 39/115 (33.91%), Postives = 59/115 (51.30%), Query Frame = 1 Query: 265 MVSFEMNDRKKXXXXXXXXXXXXXXXXXXXXXDKGLLAMGNILFIAGVSLTIGLKSTMQFFMKRQNNKGTISXXXXXXXXXXXWPILGMILETYGFIVLFSGFWPTLSVFLQRIP 609 M++FE++ K+ D LLA+GN+LFI G++ IG++ T+ FF + + KG+I +P+ GMI E +GFIVLF GF P + L+ IP Sbjct: 1 MMNFEVSTTKQIGVGLTTFGFFFIFLGVLMFLDSALLAIGNLLFIVGITFIIGVQRTLVFFFEFRKLKGSILFFGGILVVLFGYPLFGMIAECWGFIVLFGGFLPGIVNLLRSIP 115
BLAST of CN188283 vs. ExPASy Swiss-Prot
Match: GOT1_DICDI (Protein transport protein got1 homolog OS=Dictyostelium discoideum GN=golt1 PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 5.250e-11 Identity = 31/87 (35.63%), Postives = 54/87 (62.07%), Query Frame = 1 Query: 361 DKGLLAMGNILFIAGVSLTIGLKSTMQFFMKRQNNKGTI-SXXXXXXXXXXXWPILGMILETYGFIVLFSGFWPTLSVFLQRIPILG 618 D+ LLA+GN+L ++G+ L +GL+ T +FF +++ KGTI W +GM++E +GF+ LF +P + L+++PI+G Sbjct: 29 DRNLLALGNLLLVSGIVLILGLQKTTKFFAQKKKIKGTILFFFGIVVLLVTRWTFVGMVIEIFGFVNLFGDAFPIVISILRKLPIIG 115 The following BLAST results are available for this feature:
BLAST of CN188283 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CN188283 ID=CN188283; Name=CN188283; organism=Citrus sinensis; type=EST; length=628bpback to top |