CN188281
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN188281 vs. ExPASy Swiss-Prot
Match: GH33_ARATH (Indole-3-acetic acid-amido synthetase GH3.3 OS=Arabidopsis thaliana GN=GH3.3 PE=1 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 4.825e-42 Identity = 82/97 (84.54%), Postives = 88/97 (90.72%), Query Frame = -3 Query: 474 SDEVLNQCCLVVEESLNSVYRQGRVADNSIGPLEIRVVKNGTFEELMDYAISRGASINQYKAPRCVSFTPILELLNGRVVSKHFSPAAPHWVPERRR 764 +DEV+ +CCL +EESLNSVYRQ RVAD SIGPLEIRVVKNGTFEELMDYAISRGASINQYK PRCVSFTPI+ELL+ RVVS HFSPA PHW PERRR Sbjct: 499 NDEVMARCCLEMEESLNSVYRQSRVADKSIGPLEIRVVKNGTFEELMDYAISRGASINQYKVPRCVSFTPIMELLDSRVVSTHFSPALPHWSPERRR 595
BLAST of CN188281 vs. ExPASy Swiss-Prot
Match: GH31_ARATH (Probable indole-3-acetic acid-amido synthetase GH3.1 OS=Arabidopsis thaliana GN=GH3.1 PE=2 SV=1) HSP 1 Score: 168.318 bits (425), Expect = 4.085e-41 Identity = 79/97 (81.44%), Postives = 87/97 (89.69%), Query Frame = -3 Query: 474 SDEVLNQCCLVVEESLNSVYRQGRVADNSIGPLEIRVVKNGTFEELMDYAISRGASINQYKAPRCVSFTPILELLNGRVVSKHFSPAAPHWVPERRR 764 S E L +CCL +EESLNSVYRQ RVADNS+GPLEIRVV+NGTFEELMDYAISRGASINQYK PRCV+FTPI+ELL+ RVVS HFSP+ PHW PERRR Sbjct: 493 SHETLTRCCLGMEESLNSVYRQSRVADNSVGPLEIRVVRNGTFEELMDYAISRGASINQYKVPRCVNFTPIVELLDSRVVSAHFSPSLPHWTPERRR 589
BLAST of CN188281 vs. ExPASy Swiss-Prot
Match: GH34_ARATH (Indole-3-acetic acid-amido synthetase GH3.4 OS=Arabidopsis thaliana GN=GH3.4 PE=1 SV=1) HSP 1 Score: 157.918 bits (398), Expect = 5.521e-38 Identity = 73/96 (76.04%), Postives = 86/96 (89.58%), Query Frame = -3 Query: 477 SDEVLNQCCLVVEESLNSVYRQGRVADNSIGPLEIRVVKNGTFEELMDYAISRGASINQYKAPRCVSFTPILELLNGRVVSKHFSPAAPHWVPERR 764 SDEV+ +CCL +EESLN+VYRQ RV+D SIGPLEIRVV+NGTFEELMD++ISRG+SINQYK PRCVS TPI++LL+ RVVS HFSP+ PHW PERR Sbjct: 501 SDEVMAKCCLEMEESLNAVYRQSRVSDKSIGPLEIRVVQNGTFEELMDFSISRGSSINQYKVPRCVSLTPIMKLLDSRVVSAHFSPSLPHWSPERR 596
BLAST of CN188281 vs. ExPASy Swiss-Prot
Match: GH38_ORYSJ (Probable indole-3-acetic acid-amido synthetase GH3.8 OS=Oryza sativa subsp. japonica GN=GH3.8 PE=2 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 7.972e-37 Identity = 72/94 (76.60%), Postives = 81/94 (86.17%), Query Frame = -3 Query: 477 EVLNQCCLVVEESLNSVYRQGRVADNSIGPLEIRVVKNGTFEELMDYAISRGASINQYKAPRCVSFTPILELLNGRVVSKHFSPAAPHWVPERR 758 + L +CCL +EE+LN+VYRQ RVAD SIGPLEIRVV+ GTFEELMDYAISRGASINQYK PRCV+F PI+ELL+ RVVS HFSPA PHW P RR Sbjct: 510 DTLGRCCLEMEEALNTVYRQSRVADGSIGPLEIRVVRPGTFEELMDYAISRGASINQYKVPRCVTFPPIVELLDSRVVSSHFSPALPHWTPARR 603
BLAST of CN188281 vs. ExPASy Swiss-Prot
Match: GH38_ORYSI (Probable indole-3-acetic acid-amido synthetase GH3.8 OS=Oryza sativa subsp. indica GN=GH3.8 PE=2 SV=2) HSP 1 Score: 154.066 bits (388), Expect = 7.972e-37 Identity = 72/94 (76.60%), Postives = 81/94 (86.17%), Query Frame = -3 Query: 477 EVLNQCCLVVEESLNSVYRQGRVADNSIGPLEIRVVKNGTFEELMDYAISRGASINQYKAPRCVSFTPILELLNGRVVSKHFSPAAPHWVPERR 758 + L +CCL +EE+LN+VYRQ RVAD SIGPLEIRVV+ GTFEELMDYAISRGASINQYK PRCV+F PI+ELL+ RVVS HFSPA PHW P RR Sbjct: 510 DTLGRCCLEMEEALNTVYRQSRVADGSIGPLEIRVVRPGTFEELMDYAISRGASINQYKVPRCVTFPPIVELLDSRVVSSHFSPALPHWTPARR 603
BLAST of CN188281 vs. ExPASy Swiss-Prot
Match: GH36_ARATH (Indole-3-acetic acid-amido synthetase GH3.6 OS=Arabidopsis thaliana GN=GH3.6 PE=1 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 5.347e-33 Identity = 65/96 (67.71%), Postives = 77/96 (80.21%), Query Frame = -3 Query: 468 VLNQCCLVVEESLNSVYRQGRVADNSIGPLEIRVVKNGTFEELMDYAISRGASINQYKAPRCVSFTPILELLNGRVVSKHFSPAAPHWVPERRR*G 755 V CCL +EESLNSVYRQGRV+D SIGPLEI++V++GTF++LMDYAIS GASINQYK PRCV F PI+ELLN RVV +FSP P W P ++ G Sbjct: 515 VFEDCCLTIEESLNSVYRQGRVSDKSIGPLEIKMVESGTFDKLMDYAISLGASINQYKTPRCVKFAPIIELLNSRVVDSYFSPKCPKWSPGHKQWG 610
BLAST of CN188281 vs. ExPASy Swiss-Prot
Match: GH35_ARATH (Indole-3-acetic acid-amido synthetase GH3.5 OS=Arabidopsis thaliana GN=GH3.5 PE=1 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 6.984e-33 Identity = 65/96 (67.71%), Postives = 76/96 (79.17%), Query Frame = -3 Query: 468 VLNQCCLVVEESLNSVYRQGRVADNSIGPLEIRVVKNGTFEELMDYAISRGASINQYKAPRCVSFTPILELLNGRVVSKHFSPAAPHWVPERRR*G 755 V CCL VEES N+VYRQGRV+D SIGPLEI++V+ GTF++LMDYAIS GASINQYK PRCV F PI+ELLN RVV +FSP P WVP ++ G Sbjct: 515 VFEDCCLAVEESFNTVYRQGRVSDKSIGPLEIKIVEPGTFDKLMDYAISLGASINQYKTPRCVKFAPIIELLNSRVVDSYFSPKCPKWVPGHKQWG 610
BLAST of CN188281 vs. ExPASy Swiss-Prot
Match: GH32_ORYSJ (Probable indole-3-acetic acid-amido synthetase GH3.2 OS=Oryza sativa subsp. japonica GN=GH3.2 PE=2 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 1.556e-32 Identity = 67/93 (72.04%), Postives = 80/93 (86.02%), Query Frame = -3 Query: 477 VLNQCCLVVEESLNSVYRQGRVADNSIGPLEIRVVKNGTFEELMDYAISRGASINQYKAPRCVSFTPILELLNGRVVSKHFSPAAPHWVPERR 755 V +CCL +EE+LN+VYRQGR + +IGPLEIRVV+ GTFEE+MDYAISRGASINQYKAPRCVSF PI+ELLN RV+SKHFSPA P + P ++ Sbjct: 523 VFERCCLEMEEALNAVYRQGRNGE-AIGPLEIRVVRAGTFEEVMDYAISRGASINQYKAPRCVSFGPIIELLNSRVISKHFSPACPKYSPHKK 614
BLAST of CN188281 vs. ExPASy Swiss-Prot
Match: GH31_ORYSJ (Probable indole-3-acetic acid-amido synthetase GH3.1 OS=Oryza sativa subsp. japonica GN=GH3.1 PE=2 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 3.832e-31 Identity = 64/94 (68.09%), Postives = 74/94 (78.72%), Query Frame = -3 Query: 474 VLNQCCLVVEESLNSVYRQGRVADNSIGPLEIRVVKNGTFEELMDYAISRGASINQYKAPRCVSFTPILELLNGRVVSKHFSPAAPHWVPERRR 755 V +CCL VEE+LNSVYRQGR D SIGPLEIRVV GTF++LMDYAISRGASINQYKAPRCV P++ELL+ RV K+FSP P W P ++ Sbjct: 504 VFEECCLSVEEALNSVYRQGRACDRSIGPLEIRVVAEGTFDKLMDYAISRGASINQYKAPRCVRPGPVVELLDARVQGKYFSPKCPKWSPGNKQ 597
BLAST of CN188281 vs. ExPASy Swiss-Prot
Match: GH39_ORYSJ (Probable indole-3-acetic acid-amido synthetase GH3.9 OS=Oryza sativa subsp. japonica GN=GH3.9 PE=2 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 6.536e-31 Identity = 61/94 (64.89%), Postives = 76/94 (80.85%), Query Frame = -3 Query: 477 EVLNQCCLVVEESLNSVYRQGRVADNSIGPLEIRVVKNGTFEELMDYAISRGASINQYKAPRCVSFTPILELLNGRVVSKHFSPAAPHWVPERR 758 E L +CCL +EE+L++VYRQGRVAD SIGPLEIR+V+ GTFEE+MD A+SRG SI QYK P+CV+ ++ELL+ RVVS FSPA PHW+P R Sbjct: 346 ETLGRCCLEMEEALSAVYRQGRVADGSIGPLEIRIVRPGTFEEVMDLAVSRGTSIGQYKVPQCVTVPSVVELLDSRVVSSQFSPALPHWIPTPR 439 The following BLAST results are available for this feature:
BLAST of CN188281 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 15
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188281 ID=CN188281; Name=CN188281; organism=Citrus sinensis; type=EST; length=766bpback to top |