CN188271
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN188271 vs. ExPASy Swiss-Prot
Match: UBC13_ARATH (Ubiquitin-conjugating enzyme E2 13 OS=Arabidopsis thaliana GN=UBC13 PE=2 SV=1) HSP 1 Score: 271.166 bits (692), Expect = 4.869e-72 Identity = 124/151 (82.12%), Postives = 133/151 (88.08%), Query Frame = -2 Query: 268 DLCKNPVAGFSAGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTEIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVEXXXXXXXXXXXSPNDESPANVEAAKEWRDRRDDFKKKVGRCVRRSQEM 720 DLCK+PV GFSAGLVDE NIFEWSVTIIGPPDTLYEGGFF AIMSFP NYPNSPPTV+FT++IWHPNVYPDGRVCISILHPPGDDP+GYELASERW PVHTVE PNDESPANVEAAKEWR++RD+FKKKV RCVR+SQEM Sbjct: 15 DLCKHPVDGFSAGLVDEKNIFEWSVTIIGPPDTLYEGGFFYAIMSFPQNYPNSPPTVRFTSDIWHPNVYPDGRVCISILHPPGDDPSGYELASERWTPVHTVESIMLSIISMLSGPNDESPANVEAAKEWREKRDEFKKKVSRCVRKSQEM 165
BLAST of CN188271 vs. ExPASy Swiss-Prot
Match: UBC7_ARATH (Ubiquitin-conjugating enzyme E2 7 OS=Arabidopsis thaliana GN=UBC7 PE=2 SV=1) HSP 1 Score: 270.396 bits (690), Expect = 8.306e-72 Identity = 123/151 (81.46%), Postives = 133/151 (88.08%), Query Frame = -2 Query: 268 DLCKNPVAGFSAGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTEIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVEXXXXXXXXXXXSPNDESPANVEAAKEWRDRRDDFKKKVGRCVRRSQEM 720 DLCK+PV GFSAGLVDE NIFEWSVTIIGPPDTLYEGGFFNAIM+FP NYPNSPPTV+FT+++WHPNVY DGRVCISILHPPGDDP+GYELASERW PVHTVE PNDESPANVEAAKEWRD+RD+FKKKV RCVR+SQEM Sbjct: 15 DLCKHPVDGFSAGLVDEKNIFEWSVTIIGPPDTLYEGGFFNAIMTFPQNYPNSPPTVRFTSDMWHPNVYSDGRVCISILHPPGDDPSGYELASERWTPVHTVESIMLSIISMLSGPNDESPANVEAAKEWRDKRDEFKKKVSRCVRKSQEM 165
BLAST of CN188271 vs. ExPASy Swiss-Prot
Match: UBC14_ARATH (Ubiquitin-conjugating enzyme E2 14 OS=Arabidopsis thaliana GN=UBC14 PE=2 SV=1) HSP 1 Score: 259.996 bits (663), Expect = 1.123e-68 Identity = 119/152 (78.29%), Postives = 129/152 (84.87%), Query Frame = -2 Query: 265 DLCKNPVAGFSAGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTEIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVEXXXXXXXXXXXSPNDESPANVEAAKEWRDRRDDFKKKVGRCVRRSQEML 720 DLCK PV GFSAGLVDE N+F+WSV+I+GPPDTLYEGGFFNAIMSFP NYP SPPTV FT+E+WHPNVY DG+VCISILHPPGDDP+GYELASERW PVHTVE PNDESPANVEAAKEWRD R +F+KKV RCVRRSQEML Sbjct: 16 DLCKKPVDGFSAGLVDEKNVFQWSVSIMGPPDTLYEGGFFNAIMSFPENYPVSPPTVTFTSEMWHPNVYSDGKVCISILHPPGDDPHGYELASERWTPVHTVESIVLSIISMLSGPNDESPANVEAAKEWRDNRAEFRKKVSRCVRRSQEML 167
BLAST of CN188271 vs. ExPASy Swiss-Prot
Match: UBC7_WHEAT (Ubiquitin-conjugating enzyme E2 7 OS=Triticum aestivum GN=UBC7 PE=2 SV=1) HSP 1 Score: 241.506 bits (615), Expect = 4.132e-63 Identity = 109/147 (74.15%), Postives = 125/147 (85.03%), Query Frame = -2 Query: 265 PVAGFSAGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTEIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVEXXXXXXXXXXXSPNDESPANVEAAKEWRDRRDDFKKKVGRCVRRSQEML 705 P GF G VD++N+FEW VTIIGPP+TLY+GG+FNAIMSFP NYPNSPPTV+FT+E+WHPNVYPDGRVCISI HPPGDDPNGYELASERW PVHTVE SPNDESPAN+EAAK+WR+++D+FKKKV R VR+SQEML Sbjct: 23 PSMGFQLGFVDDSNVFEWQVTIIGPPETLYDGGYFNAIMSFPQNYPNSPPTVRFTSEMWHPNVYPDGRVCISI-HPPGDDPNGYELASERWTPVHTVESIVLSIISMLSSPNDESPANIEAAKDWREKQDEFKKKVRRAVRKSQEML 168
BLAST of CN188271 vs. ExPASy Swiss-Prot
Match: UBC15_SCHPO (Ubiquitin-conjugating enzyme E2 15 OS=Schizosaccharomyces pombe GN=ubc15 PE=2 SV=1) HSP 1 Score: 208.379 bits (529), Expect = 3.876e-53 Identity = 97/152 (63.82%), Postives = 116/152 (76.32%), Query Frame = -2 Query: 265 DLCKNPVAGFSAGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTEIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVEXXXXXXXXXXXSPNDESPANVEAAKEWRDRRDDFKKKVGRCVRRSQEML 720 ++ KNP GFS GLVD+ +IFEW V IIGP DTLYEGGFF+A +SFP +YP PP +KFTTEIWHPNV+P+G VCISILHPPGDD GYE A ERW+PVH+ E SPNDESPAN++AAKE+R+ +FKK+V R VRRS EM+ Sbjct: 16 EIQKNPPQGFSVGLVDDKSIFEWEVMIIGPEDTLYEGGFFHATLSFPQDYPLMPPKMKFTTEIWHPNVHPNGEVCISILHPPGDDKYGYEDAGERWLPVHSPETILISVISMLSSPNDESPANIDAAKEFRENPQEFKKRVRRLVRRSIEMI 167
BLAST of CN188271 vs. ExPASy Swiss-Prot
Match: UB2G1_RAT (Ubiquitin-conjugating enzyme E2 G1 OS=Rattus norvegicus GN=Ube2g1 PE=2 SV=3) HSP 1 Score: 200.29 bits (508), Expect = 1.056e-50 Identity = 92/151 (60.93%), Postives = 111/151 (73.51%), Query Frame = -2 Query: 271 DLCKNPVAGFSAGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTEIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVEXXXXXXXXXXXSPNDESPANVEAAKEWR-DRRDDFKKKVGRCVRRSQE 720 +L KNPV GFSAGL+D+ +++ W V IIGPPDTLYEGG F A ++FP +YP PP +KF TEIWHPNV +G VCISILH PG+D GYE ERW+P+HTVE PN +SPANV+AAKEWR DR +FK+KV RCVR+SQE Sbjct: 16 ELNKNPVEGFSAGLIDDNDLYRWEVLIIGPPDTLYEGGVFKAHLTFPKDYPLRPPKMKFITEIWHPNVDKNGDVCISILHEPGEDKYGYEKPEERWLPIHTVETIMISVISMLADPNGDSPANVDAAKEWREDRNGEFKRKVARCVRKSQE 166
BLAST of CN188271 vs. ExPASy Swiss-Prot
Match: UB2G1_MOUSE (Ubiquitin-conjugating enzyme E2 G1 OS=Mus musculus GN=Ube2g1 PE=2 SV=3) HSP 1 Score: 200.29 bits (508), Expect = 1.056e-50 Identity = 92/151 (60.93%), Postives = 111/151 (73.51%), Query Frame = -2 Query: 271 DLCKNPVAGFSAGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTEIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVEXXXXXXXXXXXSPNDESPANVEAAKEWR-DRRDDFKKKVGRCVRRSQE 720 +L KNPV GFSAGL+D+ +++ W V IIGPPDTLYEGG F A ++FP +YP PP +KF TEIWHPNV +G VCISILH PG+D GYE ERW+P+HTVE PN +SPANV+AAKEWR DR +FK+KV RCVR+SQE Sbjct: 16 ELNKNPVEGFSAGLIDDNDLYRWEVLIIGPPDTLYEGGVFKAHLTFPKDYPLRPPKMKFITEIWHPNVDKNGDVCISILHEPGEDKYGYEKPEERWLPIHTVETIMISVISMLADPNGDSPANVDAAKEWREDRNGEFKRKVARCVRKSQE 166
BLAST of CN188271 vs. ExPASy Swiss-Prot
Match: UB2G1_HUMAN (Ubiquitin-conjugating enzyme E2 G1 OS=Homo sapiens GN=UBE2G1 PE=1 SV=3) HSP 1 Score: 200.29 bits (508), Expect = 1.056e-50 Identity = 92/151 (60.93%), Postives = 111/151 (73.51%), Query Frame = -2 Query: 271 DLCKNPVAGFSAGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTEIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVEXXXXXXXXXXXSPNDESPANVEAAKEWR-DRRDDFKKKVGRCVRRSQE 720 +L KNPV GFSAGL+D+ +++ W V IIGPPDTLYEGG F A ++FP +YP PP +KF TEIWHPNV +G VCISILH PG+D GYE ERW+P+HTVE PN +SPANV+AAKEWR DR +FK+KV RCVR+SQE Sbjct: 16 ELNKNPVEGFSAGLIDDNDLYRWEVLIIGPPDTLYEGGVFKAHLTFPKDYPLRPPKMKFITEIWHPNVDKNGDVCISILHEPGEDKYGYEKPEERWLPIHTVETIMISVISMLADPNGDSPANVDAAKEWREDRNGEFKRKVARCVRKSQE 166
BLAST of CN188271 vs. ExPASy Swiss-Prot
Match: UB2G1_MACFA (Ubiquitin-conjugating enzyme E2 G1 OS=Macaca fascicularis GN=UBE2G1 PE=2 SV=1) HSP 1 Score: 197.593 bits (501), Expect = 6.842e-50 Identity = 91/151 (60.26%), Postives = 110/151 (72.85%), Query Frame = -2 Query: 271 DLCKNPVAGFSAGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTEIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVEXXXXXXXXXXXSPNDESPANVEAAKEWR-DRRDDFKKKVGRCVRRSQE 720 +L KNPV GFSAGL+D+ +++ W V IIGPPDTLYEGG F A ++FP +YP PP +KF TEIWHPNV +G VCISILH PG+D GYE RW+P+HTVE PN +SPANV+AAKEWR DR +FK+KV RCVR+SQE Sbjct: 16 ELNKNPVEGFSAGLIDDNDLYRWEVLIIGPPDTLYEGGVFKAHLTFPKDYPLRPPKMKFITEIWHPNVDKNGDVCISILHEPGEDKYGYEKPEGRWLPIHTVETIMISVISMLADPNGDSPANVDAAKEWREDRNGEFKRKVARCVRKSQE 166
BLAST of CN188271 vs. ExPASy Swiss-Prot
Match: UBC7_CAEEL (Probable ubiquitin-conjugating enzyme E2 7 OS=Caenorhabditis elegans GN=ubc-7 PE=1 SV=1) HSP 1 Score: 197.208 bits (500), Expect = 8.936e-50 Identity = 91/150 (60.67%), Postives = 109/150 (72.67%), Query Frame = -2 Query: 271 DLCKNPVAGFSAGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTEIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVEXXXXXXXXXXXSPNDESPANVEAAKEWRDRRDDFKKKVGRCVRRSQE 720 D+ + PV GFSAGLVD+ +I++W V +IGPPDTLYEGGFF AI+ FP +YP PP +KF +EIWHPN+ +G VCISILH PGDD GYE ERW+PVHTVE PN ESPANV+AAK R+ +FKKKV +CVRRSQE Sbjct: 14 DMRRVPVDGFSAGLVDDNDIYKWEVLVIGPPDTLYEGGFFKAILDFPRDYPQKPPKMKFISEIWHPNIDKEGNVCISILHDPGDDKWGYERPEERWLPVHTVETILLSVISMLTDPNFESPANVDAAKMQRENYAEFKKKVAQCVRRSQE 163 The following BLAST results are available for this feature:
BLAST of CN188271 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 165
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188271 ID=CN188271; Name=CN188271; organism=Citrus sinensis; type=EST; length=805bpback to top |