CN188262

Overview
NameCN188262
Unique NameCN188262
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length454
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6745 contig Csv1_Contig6745:1959..2414. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN188262 vs. ExPASy Swiss-Prot
Match: ALF_ORYSJ (Fructose-bisphosphate aldolase cytoplasmic isozyme OS=Oryza sativa subsp. japonica GN=FBA PE=1 SV=2)

HSP 1 Score: 105.531 bits (262), Expect = 1.080e-22
Identity = 49/57 (85.96%), Postives = 54/57 (94.74%), Query Frame = -1
Query:  284 QSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 454
            QSTLKAW+GK EN++KA+AAFL RCKANSEATLGTYKGDA LGEGA+ESLHVKDYKY
Sbjct:  302 QSTLKAWSGKAENIEKARAAFLTRCKANSEATLGTYKGDAVLGEGASESLHVKDYKY 358          
BLAST of CN188262 vs. ExPASy Swiss-Prot
Match: ALF_CICAR (Fructose-bisphosphate aldolase, cytoplasmic isozyme OS=Cicer arietinum GN=ALDC PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 1.011e-20
Identity = 47/57 (82.46%), Postives = 52/57 (91.23%), Query Frame = -1
Query:  284 QSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 454
            QSTLKAW+GKEENV+ AQ A L R KANSEATLGTYKG++QLGEGA+ESLHVKDYKY
Sbjct:  303 QSTLKAWSGKEENVKNAQDALLTRAKANSEATLGTYKGNSQLGEGASESLHVKDYKY 359          
BLAST of CN188262 vs. ExPASy Swiss-Prot
Match: ALF2_PEA (Fructose-bisphosphate aldolase, cytoplasmic isozyme 2 OS=Pisum sativum PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 3.596e-18
Identity = 44/57 (77.19%), Postives = 47/57 (82.46%), Query Frame = -1
Query:  284 QSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 454
            QSTLKAW GK ENV+ AQ A L R KANSEATLGTYKG + LG GA+ESLHVKDYKY
Sbjct:  303 QSTLKAWGGKTENVKAAQDALLTRAKANSEATLGTYKGASNLGAGASESLHVKDYKY 359          
BLAST of CN188262 vs. ExPASy Swiss-Prot
Match: ALF_MAIZE (Fructose-bisphosphate aldolase, cytoplasmic isozyme OS=Zea mays PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 2.331e-17
Identity = 44/56 (78.57%), Postives = 47/56 (83.93%), Query Frame = -1
Query:  284 STLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 451
            STLKAWAGK EN++KA+AAFL RCKANSEATLGTYKGDA       ESLHVKDYKY
Sbjct:  303 STLKAWAGKVENLEKARAAFLARCKANSEATLGTYKGDA---AADTESLHVKDYKY 355          
BLAST of CN188262 vs. ExPASy Swiss-Prot
Match: ALF_SPIOL (Fructose-bisphosphate aldolase, cytoplasmic isozyme OS=Spinacia oleracea PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 1.671e-15
Identity = 42/57 (73.68%), Postives = 44/57 (77.19%), Query Frame = -1
Query:  284 QSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 454
            QSTLKAW GKEENV KAQ  FL R K NSEATLG Y+G A  G  A+ESLHVKDYKY
Sbjct:  302 QSTLKAWQGKEENVAKAQEVFLARAKGNSEATLGKYQGGAG-GADASESLHVKDYKY 357          
BLAST of CN188262 vs. ExPASy Swiss-Prot
Match: ALF1_PEA (Fructose-bisphosphate aldolase, cytoplasmic isozyme 1 OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 3.722e-15
Identity = 41/57 (71.93%), Postives = 45/57 (78.95%), Query Frame = -1
Query:  284 QSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 454
            QSTLK W+GK+ENV KAQ  FL RCKANSEATLG Y G +  G  A+ESLHVKDYKY
Sbjct:  302 QSTLKTWSGKKENVGKAQDVFLARCKANSEATLGKYGGGSGTGL-ASESLHVKDYKY 357          
BLAST of CN188262 vs. ExPASy Swiss-Prot
Match: ALF_ARATH (Fructose-bisphosphate aldolase, cytoplasmic isozyme OS=Arabidopsis thaliana GN=At4g26520 PE=2 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 1.121e-11
Identity = 35/57 (61.40%), Postives = 39/57 (68.42%), Query Frame = -1
Query:  284 QSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 454
            QS +KAWAGK ENV KAQA FL RCKAN +ATLG Y G A     A E+L V  Y+Y
Sbjct:  302 QSAIKAWAGKPENVAKAQAKFLTRCKANKDATLGKYTGWASGDSAAFENLVVIGYRY 358          
The following BLAST results are available for this feature:
BLAST of CN188262 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
ALF_ORYSJ1.080e-2285.96Fructose-bisphosphate aldolase cytoplasmic isozyme... [more]
ALF_CICAR1.011e-2082.46Fructose-bisphosphate aldolase, cytoplasmic isozym... [more]
ALF2_PEA3.596e-1877.19Fructose-bisphosphate aldolase, cytoplasmic isozym... [more]
ALF_MAIZE2.331e-1778.57Fructose-bisphosphate aldolase, cytoplasmic isozym... [more]
ALF_SPIOL1.671e-1573.68Fructose-bisphosphate aldolase, cytoplasmic isozym... [more]
ALF1_PEA3.722e-1571.93Fructose-bisphosphate aldolase, cytoplasmic isozym... [more]
ALF_ARATH1.121e-1161.40Fructose-bisphosphate aldolase, cytoplasmic isozym... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS05_0005M02_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0005M02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188262 ID=CN188262; Name=CN188262; organism=Citrus sinensis; type=EST; length=454bp
CTTTTTTTAGCACAAGAAACATTATCAATTATGTGACAAAATCACAGAAA
TTTAGCGCCATTAGGGGGAAAAGGAAAAAAAAAACAAAAACAAAAGCATA
AACAGTTTTCAGTTTAGTTTTGATCAAAACCACTCAAACCGAAGTTCCCA
AGCTTTTTATTGCTCCACCTAATATGAAAAAGCCCTAAAACTATGAATGA
GAATGTGCCAACCTAATGTTCATACCGCCATTTACTCTCATAAAGTTCAT
AAAGCACAACACCCAAAGCTTCAACTGTGCTTAGTATTTGTAGTCCTTGA
CATGGAGAGACTCTGCGGCACCTTCACCAAGCTGGGCATCGCCCTTGTAA
GTACCGAGGGTAGCCTCAGAGTTGGCCTTGCACCTGACAAGGAAAGCAGC
CTGGGCCTTCTGCACATTCTCTTCCTTTCCAGCCCATGCCTTGAGAGTGC
TCTG
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