CN188253
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN188253 vs. ExPASy Swiss-Prot
Match: AG_TOBAC (Floral homeotic protein AGAMOUS OS=Nicotiana tabacum GN=AG1 PE=2 SV=1) HSP 1 Score: 229.95 bits (585), Expect = 7.607e-60 Identity = 114/149 (76.51%), Postives = 134/149 (89.93%), Query Frame = 3 Query: 165 MAFPNELAAGREELSPKRKMGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVSLIVFSSRGRLYEYSNNSVKSTIDRYKKATADTSNTGSICEANAQFYQQEAAKLRIQISNMQNSNRNMLGESLSGLNFKELKNMETR 611 M F ++L E+SP+RK+GRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEV+LIVFSSRGRLYEY+NNSVK+TI+RYKKA +D+SNTGSI EANAQ+YQQEA+KLR QI N+QN NRNMLGESL+ L+ ++LKN+E + Sbjct: 1 MDFQSDLT---REISPQRKLGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNSVKATIERYKKACSDSSNTGSISEANAQYYQQEASKLRAQIGNLQNQNRNMLGESLAALSLRDLKNLEQK 146
BLAST of CN188253 vs. ExPASy Swiss-Prot
Match: AG_PETHY (Floral homeotic protein AGAMOUS OS=Petunia hybrida GN=AG1 PE=2 SV=1) HSP 1 Score: 229.565 bits (584), Expect = 9.935e-60 Identity = 113/149 (75.84%), Postives = 133/149 (89.26%), Query Frame = 3 Query: 165 MAFPNELAAGREELSPKRKMGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVSLIVFSSRGRLYEYSNNSVKSTIDRYKKATADTSNTGSICEANAQFYQQEAAKLRIQISNMQNSNRNMLGESLSGLNFKELKNMETR 611 M F ++L E+SP+RK+GRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEV+LIVFSSRGRLYEY+NNSVK+TI+RYKKA +D+SNTGSI EANAQ+YQQEA+KLR QI N+QN NRN LGESL+ LN ++L+N+E + Sbjct: 1 MEFQSDLT---REISPQRKLGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNSVKATIERYKKACSDSSNTGSIAEANAQYYQQEASKLRAQIGNLQNQNRNFLGESLAALNLRDLRNLEQK 146
BLAST of CN188253 vs. ExPASy Swiss-Prot
Match: AG_SOLLC (Floral homeotic protein AGAMOUS OS=Solanum lycopersicum GN=AG1 PE=2 SV=1) HSP 1 Score: 228.794 bits (582), Expect = 1.695e-59 Identity = 111/149 (74.50%), Postives = 133/149 (89.26%), Query Frame = 3 Query: 165 MAFPNELAAGREELSPKRKMGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVSLIVFSSRGRLYEYSNNSVKSTIDRYKKATADTSNTGSICEANAQFYQQEAAKLRIQISNMQNSNRNMLGESLSGLNFKELKNMETR 611 M F ++L E+SP+RK+GRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEV+L+VFS+RGRLYEY+NNSVK+TI+RYKKA +D+SNTGS+ EANAQ+YQQEA+KLR QI N+ N NRNM+GE+L+G+ KELKN+E R Sbjct: 1 MDFQSDLT---REISPQRKLGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSNRGRLYEYANNSVKATIERYKKACSDSSNTGSVSEANAQYYQQEASKLRAQIGNLMNQNRNMMGEALAGMKLKELKNLEQR 146
BLAST of CN188253 vs. ExPASy Swiss-Prot
Match: AG_BRANA (Floral homeotic protein AGAMOUS OS=Brassica napus GN=AG1 PE=2 SV=1) HSP 1 Score: 217.624 bits (553), Expect = 3.907e-56 Identity = 110/149 (73.83%), Postives = 128/149 (85.91%), Query Frame = 3 Query: 165 MAFPNELAAGREELSPKRKMGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVSLIVFSSRGRLYEYSNNSVKSTIDRYKKATADTSNTGSICEANAQFYQQEAAKLRIQISNMQNSNRNMLGESLSGLNFKELKNMETR 611 MA+ EL E SP+RK GRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEV+LIVFSSRGRLYEYSNNSVK TI+RYKKA +D SNTGS+ E NAQ+YQQE+AKLR QI ++QNSNR ++GE++ ++ KEL+N+E R Sbjct: 1 MAYQMELGG---ESSPQRKAGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSNNSVKGTIERYKKAISDNSNTGSVAEINAQYYQQESAKLRQQIISIQNSNRQLMGETIGSMSPKELRNLEGR 146
BLAST of CN188253 vs. ExPASy Swiss-Prot
Match: AG_PANGI (Floral homeotic protein AGAMOUS OS=Panax ginseng GN=AG2 PE=2 SV=1) HSP 1 Score: 216.468 bits (550), Expect = 8.703e-56 Identity = 105/136 (77.21%), Postives = 123/136 (90.44%), Query Frame = 3 Query: 204 LSPKRKMGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVSLIVFSSRGRLYEYSNNSVKSTIDRYKKATADTSNTGSICEANAQFYQQEAAKLRIQISNMQNSNRNMLGESLSGLNFKELKNMETR 611 LSP+RK+GRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEV+LIVFS+RGRLYEY+NNSVK TI+RYKKA D+ NT S+ EANAQFYQQEA+KLR +IS++Q +NRNM+GESL L ++LK +ET+ Sbjct: 11 LSPQRKLGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGRLYEYANNSVKGTIERYKKACTDSPNTSSVSEANAQFYQQEASKLRQEISSIQKNNRNMMGESLGSLTVRDLKGLETK 146
BLAST of CN188253 vs. ExPASy Swiss-Prot
Match: AG_ARATH (Floral homeotic protein AGAMOUS OS=Arabidopsis thaliana GN=AG PE=1 SV=2) HSP 1 Score: 216.468 bits (550), Expect = 8.703e-56 Identity = 109/149 (73.15%), Postives = 128/149 (85.91%), Query Frame = 3 Query: 165 MAFPNELAAGREELSPKRKMGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVSLIVFSSRGRLYEYSNNSVKSTIDRYKKATADTSNTGSICEANAQFYQQEAAKLRIQISNMQNSNRNMLGESLSGLNFKELKNMETR 611 MA+ +EL + SP RK GRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEV+LIVFSSRGRLYEYSNNSVK TI+RYKKA +D SNTGS+ E NAQ+YQQE+AKLR QI ++QNSNR ++GE++ ++ KEL+N+E R Sbjct: 1 MAYQSELGG---DSSPLRKSGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSNNSVKGTIERYKKAISDNSNTGSVAEINAQYYQQESAKLRQQIISIQNSNRQLMGETIGSMSPKELRNLEGR 146
BLAST of CN188253 vs. ExPASy Swiss-Prot
Match: AGL5_ARATH (Agamous-like MADS-box protein AGL5 OS=Arabidopsis thaliana GN=AGL5 PE=2 SV=1) HSP 1 Score: 209.149 bits (531), Expect = 1.389e-53 Identity = 103/144 (71.53%), Postives = 122/144 (84.72%), Query Frame = 3 Query: 180 ELAAGREELSPKRKMGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVSLIVFSSRGRLYEYSNNSVKSTIDRYKKATADTSNTGSICEANAQFYQQEAAKLRIQISNMQNSNRNMLGESLSGLNFKELKNMETR 611 E A E +K+GRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEV+L++FS+RGRLYEY+NNSV+ TI+RYKKA +D N +I EAN Q+YQQEA+KLR QI ++QN NR++LGESL LNFKELKN+E+R Sbjct: 2 EGGASNEVAESSKKIGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVIFSTRGRLYEYANNSVRGTIERYKKACSDAVNPPTITEANTQYYQQEASKLRRQIRDIQNLNRHILGESLGSLNFKELKNLESR 145
BLAST of CN188253 vs. ExPASy Swiss-Prot
Match: AGL1_ARATH (Agamous-like MADS-box protein AGL1 OS=Arabidopsis thaliana GN=AGL1 PE=1 SV=1) HSP 1 Score: 208.379 bits (529), Expect = 2.370e-53 Identity = 101/144 (70.14%), Postives = 121/144 (84.03%), Query Frame = 3 Query: 180 ELAAGREELSPKRKMGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVSLIVFSSRGRLYEYSNNSVKSTIDRYKKATADTSNTGSICEANAQFYQQEAAKLRIQISNMQNSNRNMLGESLSGLNFKELKNMETR 611 E + +K+GRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEV+L++FS+RGRLYEY+NNSV+ TI+RYKKA +D N S+ EAN Q+YQQEA+KLR QI ++QNSNR+++GESL LNFKELKN+E R Sbjct: 2 EEGGSSHDAESSKKLGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVIFSTRGRLYEYANNSVRGTIERYKKACSDAVNPPSVTEANTQYYQQEASKLRRQIRDIQNSNRHIVGESLGSLNFKELKNLEGR 145
BLAST of CN188253 vs. ExPASy Swiss-Prot
Match: AGL11_ARATH (Agamous-like MADS-box protein AGL11 OS=Arabidopsis thaliana GN=AGL11 PE=2 SV=1) HSP 1 Score: 202.216 bits (513), Expect = 1.699e-51 Identity = 97/130 (74.62%), Postives = 118/130 (90.77%), Query Frame = 3 Query: 222 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVSLIVFSSRGRLYEYSNNSVKSTIDRYKKATADTSNTGSICEANAQFYQQEAAKLRIQISNMQNSNRNMLGESLSGLNFKELKNMETR 611 MGRGKIEIKRIEN+TNRQVTFCKRRNGLLKKAYELSVLCDAEV+LIVFS+RGRLYEY+NN+++STI+RYKKA +D++NT ++ E NA +YQQE+AKLR QI +QNSNRN++G+SLS L+ KELK +E R Sbjct: 1 MGRGKIEIKRIENSTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGRLYEYANNNIRSTIERYKKACSDSTNTSTVQEINAAYYQQESAKLRQQIQTIQNSNRNLMGDSLSSLSVKELKQVENR 130
BLAST of CN188253 vs. ExPASy Swiss-Prot
Match: MAD58_ORYSJ (MADS-box transcription factor 58 OS=Oryza sativa subsp. japonica GN=MADS58 PE=2 SV=1) HSP 1 Score: 200.675 bits (509), Expect = 4.942e-51 Identity = 101/150 (67.33%), Postives = 123/150 (82.00%), Query Frame = 3 Query: 165 MAFPNELAAGREELSPKRKMG-RGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVSLIVFSSRGRLYEYSNNSVKSTIDRYKKATADTSNTGSICEANAQFYQQEAAKLRIQISNMQNSNRNMLGESLSGLNFKELKNMETR 611 +A P +G K+G RGKIEIKRIENTTNRQVTFCKRR+GLLKKAYELSVLCDAEV+L+VFSSRGRLYEYSNNSVK TI+RYKKA +DTSN ++ E NAQ YQQEAAKL+ QI+N+QNSNR ++G++++ +N +ELK +E R Sbjct: 23 VASPGSGGSGGSGSVGAEKIGSRGKIEIKRIENTTNRQVTFCKRRSGLLKKAYELSVLCDAEVALVVFSSRGRLYEYSNNSVKETIERYKKANSDTSNASTVAEINAQHYQQEAAKLKQQITNLQNSNRTLVGDNITTMNHRELKQLEGR 172 The following BLAST results are available for this feature:
BLAST of CN188253 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 121
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188253 ID=CN188253; Name=CN188253; organism=Citrus sinensis; type=EST; length=612bpback to top |