CN188252
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN188252 vs. ExPASy Swiss-Prot
Match: AG_PANGI (Floral homeotic protein AGAMOUS OS=Panax ginseng GN=AG2 PE=2 SV=1) HSP 1 Score: 196.823 bits (499), Expect = 9.652e-50 Identity = 96/135 (71.11%), Postives = 113/135 (83.70%), Query Frame = -3 Query: 317 QEAAKLRIQISNMQNSNRNMLGESLSGLNFKELKNMETRLEKGISRIRSKKNELLFAEIEYMQKREVDLHNSNQLLRAKIAENERGQQNMNLMQGGSSYEIIQSQPFDSRSYFQVNALQPTNHYPRQDQMALQLV 721 QEA+KLR +IS++Q +NRNM+GESL L ++LK +ET+LEKGISRIRSKKNELLFAEIEYMQK+E+DLHN+NQ LRAKIAENER QQ+MNLM G S YE+ Q FD R+Y Q+N LQP NHY RQDQ ALQLV Sbjct: 108 QEASKLRQEISSIQKNNRNMMGESLGSLTVRDLKGLETKLEKGISRIRSKKNELLFAEIEYMQKKEIDLHNNNQYLRAKIAENERAQQHMNLMPGSSDYELAPPQSFDGRNYIQLNGLQPNNHYSRQDQTALQLV 242
BLAST of CN188252 vs. ExPASy Swiss-Prot
Match: AG_PETHY (Floral homeotic protein AGAMOUS OS=Petunia hybrida GN=AG1 PE=2 SV=1) HSP 1 Score: 189.889 bits (481), Expect = 1.180e-47 Identity = 95/136 (69.85%), Postives = 113/136 (83.09%), Query Frame = -3 Query: 317 QEAAKLRIQISNMQNSNRNMLGESLSGLNFKELKNMETRLEKGISRIRSKKNELLFAEIEYMQKREVDLHNSNQLLRAKIAENERGQQNMNLMQGGSSYEII-QSQPFDSRSYFQVNALQPTNHYPRQDQMALQLV 721 QEA+KLR QI N+QN NRN LGESL+ LN ++L+N+E ++EKGIS+IR+KKNELLFAEIEYMQKRE+DLHN+NQ LRAKIAE ER QQ MNLM G SSY+++ Q FD+R+Y QVN LQ NHYPRQDQ LQLV Sbjct: 108 QEASKLRAQIGNLQNQNRNFLGESLAALNLRDLRNLEQKIEKGISKIRAKKNELLFAEIEYMQKREIDLHNNNQYLRAKIAETERSQQ-MNLMPGSSSYDLVPPQQSFDARNYLQVNGLQTNNHYPRQDQPPLQLV 242
BLAST of CN188252 vs. ExPASy Swiss-Prot
Match: AG_TOBAC (Floral homeotic protein AGAMOUS OS=Nicotiana tabacum GN=AG1 PE=2 SV=1) HSP 1 Score: 187.193 bits (474), Expect = 7.648e-47 Identity = 96/141 (68.09%), Postives = 113/141 (80.14%), Query Frame = -3 Query: 317 QEAAKLRIQISNMQNSNRNMLGESLSGLNFKELKNMETRLEKGISRIRSKKNELLFAEIEYMQKREVDLHNSNQLLRAKIAENERG-----QQNMNLMQGGSSYEII-QSQPFDSRSYFQVNALQPTNHYPRQDQMALQLV 721 QEA+KLR QI N+QN NRNMLGESL+ L+ ++LKN+E ++EKGIS+IRSKKNELLFAEIEYMQKRE+DLHN+NQ LRAKIAE ER QQ MNLM G SSYE++ FD+R+Y QVN LQ NHY RQDQ +LQLV Sbjct: 108 QEASKLRAQIGNLQNQNRNMLGESLAALSLRDLKNLEQKIEKGISKIRSKKNELLFAEIEYMQKREIDLHNNNQYLRAKIAETERAQQQQQQQQMNLMPGSSSYELVPPPHQFDTRNYLQVNGLQTNNHYTRQDQPSLQLV 248
BLAST of CN188252 vs. ExPASy Swiss-Prot
Match: AG_SOLLC (Floral homeotic protein AGAMOUS OS=Solanum lycopersicum GN=AG1 PE=2 SV=1) HSP 1 Score: 185.652 bits (470), Expect = 2.225e-46 Identity = 97/141 (68.79%), Postives = 113/141 (80.14%), Query Frame = -3 Query: 317 QEAAKLRIQISNMQNSNRNMLGESLSGLNFKELKNMETRLEKGISRIRSKKNELLFAEIEYMQKREVDLHNSNQLLRAKIAENERGQ---QNMNLMQGGSS--YEII-QSQPFDSRSYFQVNALQPTNHYPRQDQMALQLV 721 QEA+KLR QI N+ N NRNM+GE+L+G+ KELKN+E R+EKGIS+IRSKKNELLFAEIEYMQKREVDLHN+NQ LRAKIAE ER Q Q MNLM G SS +E++ Q FD+R+Y QVN LQ NHYPRQDQ +QLV Sbjct: 108 QEASKLRAQIGNLMNQNRNMMGEALAGMKLKELKNLEQRIEKGISKIRSKKNELLFAEIEYMQKREVDLHNNNQYLRAKIAETERAQHQHQQMNLMPGSSSNYHELVPPPQQFDTRNYLQVNGLQTNNHYPRQDQPPIQLV 248
BLAST of CN188252 vs. ExPASy Swiss-Prot
Match: AG_ARATH (Floral homeotic protein AGAMOUS OS=Arabidopsis thaliana GN=AG PE=1 SV=2) HSP 1 Score: 179.874 bits (455), Expect = 1.221e-44 Identity = 94/145 (64.83%), Postives = 117/145 (80.69%), Query Frame = -3 Query: 317 QEAAKLRIQISNMQNSNRNMLGESLSGLNFKELKNMETRLEKGISRIRSKKNELLFAEIEYMQKREVDLHNSNQLLRAKIAENERGQQNMNLMQGGSSYEII------QSQPFDSRSYFQVNALQPTNHY----PRQDQMALQLV 721 QE+AKLR QI ++QNSNR ++GE++ ++ KEL+N+E RLE+ I+RIRSKKNELLF+EI+YMQKREVDLHN NQ+LRAKIAENER +++LM GGS+YE + QSQPFDSR+YFQV ALQP NH+ RQDQ ALQLV Sbjct: 108 QESAKLRQQIISIQNSNRQLMGETIGSMSPKELRNLEGRLERSITRIRSKKNELLFSEIDYMQKREVDLHNDNQILRAKIAENERNNPSISLMPGGSNYEQLMPPPQTQSQPFDSRNYFQVAALQPNNHHYSSAGRQDQTALQLV 252
BLAST of CN188252 vs. ExPASy Swiss-Prot
Match: AG_BRANA (Floral homeotic protein AGAMOUS OS=Brassica napus GN=AG1 PE=2 SV=1) HSP 1 Score: 179.489 bits (454), Expect = 1.595e-44 Identity = 94/145 (64.83%), Postives = 116/145 (80.00%), Query Frame = -3 Query: 317 QEAAKLRIQISNMQNSNRNMLGESLSGLNFKELKNMETRLEKGISRIRSKKNELLFAEIEYMQKREVDLHNSNQLLRAKIAENERGQQNMNLMQGGSSYEII------QSQPFDSRSYFQVNALQPTNHY----PRQDQMALQLV 721 QE+AKLR QI ++QNSNR ++GE++ ++ KEL+N+E RL++ ++RIRSKKNELLFAEI+YMQKREVDLHN NQLLRAKIAENER +M+LM GGS+YE I Q QPFDSR+YFQV ALQP NH+ R+DQ ALQLV Sbjct: 108 QESAKLRQQIISIQNSNRQLMGETIGSMSPKELRNLEGRLDRSVNRIRSKKNELLFAEIDYMQKREVDLHNDNQLLRAKIAENERNNPSMSLMPGGSNYEQIMPPPQTQPQPFDSRNYFQVAALQPNNHHYSSAGREDQTALQLV 252
BLAST of CN188252 vs. ExPASy Swiss-Prot
Match: AGL1_ARATH (Agamous-like MADS-box protein AGL1 OS=Arabidopsis thaliana GN=AGL1 PE=1 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 6.715e-35 Identity = 84/143 (58.74%), Postives = 105/143 (73.43%), Query Frame = -3 Query: 317 QEAAKLRIQISNMQNSNRNMLGESLSGLNFKELKNMETRLEKGISRIRSKKNELLFAEIEYMQKREVDLHNSNQLLRAKIAENER---GQQNMNLMQGGSSYEI-----IQSQPFDSRSYFQVNALQPTNHYPRQDQMALQLV 721 QEA+KLR QI ++QNSNR+++GESL LNFKELKN+E RLEKGISR+RSKKNELL AEIEYMQKRE++L ++N LRAKIAE R QQ +++QG + YE QSQ + +R+Y VN L+P + QDQ LQLV Sbjct: 107 QEASKLRRQIRDIQNSNRHIVGESLGSLNFKELKNLEGRLEKGISRVRSKKNELLVAEIEYMQKREMELQHNNMYLRAKIAEGARLNPDQQESSVIQGTTVYESGVSSHDQSQHY-NRNYIPVNLLEPNQQFSGQDQPPLQLV 248
BLAST of CN188252 vs. ExPASy Swiss-Prot
Match: MADS3_ORYSJ (MADS-box transcription factor 3 OS=Oryza sativa subsp. japonica GN=MADS3 PE=2 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 1.266e-33 Identity = 69/132 (52.27%), Postives = 103/132 (78.03%), Query Frame = -3 Query: 335 QEAAKLRIQISNMQNSN-RNMLGESLSGLNFKELKNMETRLEKGISRIRSKKNELLFAEIEYMQKREVDLHNSNQLLRAKIAENERGQQNMNLMQGGSS--YEIIQSQPFDSRSYFQVNALQPTNHYPRQDQ 721 QE++KLR QIS++QN+N R ++G+S++ ++ ++LK +E RLEKGI++IR++KNELL+AE+EYMQKREV+L N N LR+K+ ENERGQQ +N+M S+ Y+ + + P+DSR++ QVN +Q HY Q Q Sbjct: 92 QESSKLRQQISSLQNANSRTIVGDSINTMSLRDLKQVENRLEKGIAKIRARKNELLYAEVEYMQKREVELQNDNMYLRSKVVENERGQQPLNMMGAASTSEYDHMVNNPYDSRNFLQVNIMQQPQHYAHQLQ 223
BLAST of CN188252 vs. ExPASy Swiss-Prot
Match: AGL5_ARATH (Agamous-like MADS-box protein AGL5 OS=Arabidopsis thaliana GN=AGL5 PE=2 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 4.074e-32 Identity = 77/140 (55.00%), Postives = 98/140 (70.00%), Query Frame = -3 Query: 317 QEAAKLRIQISNMQNSNRNMLGESLSGLNFKELKNMETRLEKGISRIRSKKNELLFAEIEYMQKREVDLHNSNQLLRAKIAENE-RGQQNMNLMQGGSSYEIIQSQPFDS----RSYFQVNALQPTNHYPRQDQMALQLV 721 QEA+KLR QI ++QN NR++LGESL LNFKELKN+E+RLEKGISR+RSKK+E+L AEIEYMQKRE++L N N LR+KI E QQ +++ G+ YE + S R+Y VN L+P + QDQ LQLV Sbjct: 107 QEASKLRRQIRDIQNLNRHILGESLGSLNFKELKNLESRLEKGISRVRSKKHEMLVAEIEYMQKREIELQNDNMYLRSKITERTGLQQQESSVIHQGTVYESGVTSSHQSGQYNRNYIAVNLLEPNQNSSNQDQPPLQLV 246
BLAST of CN188252 vs. ExPASy Swiss-Prot
Match: MAD58_ORYSJ (MADS-box transcription factor 58 OS=Oryza sativa subsp. japonica GN=MADS58 PE=2 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 1.548e-31 Identity = 63/129 (48.84%), Postives = 97/129 (75.19%), Query Frame = -3 Query: 338 QEAAKLRIQISNMQNSNRNMLGESLSGLNFKELKNMETRLEKGISRIRSKKNELLFAEIEYMQKREVDLHNSNQLLRAKIAENERGQQNMNLMQGGSSYEIIQSQ-PFDSRSYFQVNALQPTNHYPRQD 721 QEAAKL+ QI+N+QNSNR ++G++++ +N +ELK +E RL+KG+ +IR++KNELL AEIEYMQ+RE +L N N L++K+AE+ERG Q +N+M S+ E +Q+ +D R++ Q N + +YP Q+ Sbjct: 134 QEAAKLKQQITNLQNSNRTLVGDNITTMNHRELKQLEGRLDKGLGKIRARKNELLCAEIEYMQRRETELQNDNMYLKSKVAESERGLQTVNMMGSASTSEYVQNMIHYDPRNFLQFNIMHQPQYYPEQE 262 The following BLAST results are available for this feature:
BLAST of CN188252 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 22
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188252 ID=CN188252; Name=CN188252; organism=Citrus sinensis; type=EST; length=723bpback to top |