CN188238
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN188238 vs. ExPASy Swiss-Prot
Match: RRAA2_ARATH (Regulator of ribonuclease-like protein 2 OS=Arabidopsis thaliana GN=At5g16450 PE=2 SV=1) HSP 1 Score: 296.59 bits (758), Expect = 1.026e-79 Identity = 142/166 (85.54%), Postives = 156/166 (93.98%), Query Frame = -1 Query: 131 MALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 628 MA VTTAEVCDAN +LI SG+LRALQPIFQIYGRRQ+FSGP+VT+KVFEDN LIR+F+EEKGNGRVLVVDGGGS RCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHP+KA+KKG+GE+ VP+ I GTRI DGEWLYADTDGIL+S+ ELSV Sbjct: 1 MAFVTTAEVCDANQELIRSGQLRALQPIFQIYGRRQIFSGPVVTVKVFEDNGLIRQFIEEKGNGRVLVVDGGGSQRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPIKASKKGLGEQRVPVNIAGTRICDGEWLYADTDGILVSQIELSV 166
BLAST of CN188238 vs. ExPASy Swiss-Prot
Match: RRAA1_ARATH (Regulator of ribonuclease-like protein 1 OS=Arabidopsis thaliana GN=At3g02770 PE=2 SV=1) HSP 1 Score: 293.893 bits (751), Expect = 6.648e-79 Identity = 140/166 (84.34%), Postives = 155/166 (93.37%), Query Frame = -1 Query: 131 MALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 628 MA VTTAEVCDAN ++I SG+LRALQP+FQIYGRRQ+FSGP+VT+KVFEDN LIR FLEEKGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGI+VNGCIRDVDEINGCDIGVRALASHP+KA+KKG+GE+ V + I GTRI DGEWLYADTDGIL+S+ ELSV Sbjct: 1 MAFVTTAEVCDANQEMIRSGQLRALQPVFQIYGRRQIFSGPVVTVKVFEDNGLIRHFLEEKGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIIVNGCIRDVDEINGCDIGVRALASHPIKASKKGLGEQRVSLNIAGTRICDGEWLYADTDGILVSQIELSV 166
BLAST of CN188238 vs. ExPASy Swiss-Prot
Match: RRAA3_ARATH (Regulator of ribonuclease-like protein 3 OS=Arabidopsis thaliana GN=At5g56260 PE=2 SV=1) HSP 1 Score: 249.98 bits (637), Expect = 1.101e-65 Identity = 119/166 (71.69%), Postives = 141/166 (84.94%), Query Frame = -1 Query: 131 MALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 628 MA TAE CD+N +LI +G+LRAL PIF+IYG+R+ FSGPIVTLKVFEDNVL+R LE KG G VLV+DGGGS+RCA++GGN AQNNGW+GIVVNGC+RDVDEIN CD+GVRAL S+P+K+ KKG GEK+VP+ IGGT I DGEWLYAD+DGILIS+ ELSV Sbjct: 1 MAAFATAEACDSNAELISNGDLRALHPIFKIYGQRRCFSGPIVTLKVFEDNVLVRNQLETKGEGGVLVIDGGGSMRCALVGGNLGQLAQNNGWSGIVVNGCVRDVDEINDCDVGVRALGSNPLKSTKKGHGEKNVPVHIGGTLIRDGEWLYADSDGILISKTELSV 166
BLAST of CN188238 vs. ExPASy Swiss-Prot
Match: RRAA_RALEJ (Regulator of ribonuclease activity A OS=Ralstonia eutropha (strain JMP134) GN=rraA PE=3 SV=1) HSP 1 Score: 197.978 bits (502), Expect = 4.965e-50 Identity = 85/159 (53.46%), Postives = 117/159 (73.58%), Query Frame = -1 Query: 137 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 613 T ++CDAN + G LR + P+F+ +G++Q F+GP TLK+FEDN L+RE LE G GRVLVVDGGGSLRCA++GGN + A+ NGW GI+VNGC+RD E++ CDIG+RALA+HP K+ K+G GE+ V + + G + G W+Y D DG+L+S +L Sbjct: 5 TTDLCDANEPRLADGTLRVMAPVFRAFGKQQAFAGPAATLKIFEDNSLVREALESPGQGRVLVVDGGGSLRCALVGGNLGLLAEKNGWVGIIVNGCVRDTGELDVCDIGIRALAAHPQKSQKRGAGERDVAVQMPGAVVRPGNWIYVDADGVLVSEEKL 163
BLAST of CN188238 vs. ExPASy Swiss-Prot
Match: RRAA_BURM1 (Regulator of ribonuclease activity A OS=Burkholderia multivorans (strain ATCC 17616 / 249) GN=rraA PE=3 SV=1) HSP 1 Score: 196.823 bits (499), Expect = 1.106e-49 Identity = 90/160 (56.25%), Postives = 118/160 (73.75%), Query Frame = -1 Query: 134 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELS 613 T ++CDA+ + +G LR LQP + YG F+GP TLKVFEDN L+R LE+ G GRVLVVDGG SLRCA++GGN A+ NGWAGIVV+GC+RD E+ C +GV ALA+HP K++K+G GE+ VP+T+ GTRI+ GEW+YAD DG+L+S L+ Sbjct: 5 TTDLCDAHEDKLAAGTLRVLQPALRPYGGAARFAGPAATLKVFEDNTLVRAALEQDGGGRVLVVDGGASLRCALVGGNLGALAEKNGWAGIVVHGCVRDAAELRECKVGVLALATHPRKSDKRGAGERDVPVTVLGTRIAPGEWIYADDDGVLVSATSLT 164
BLAST of CN188238 vs. ExPASy Swiss-Prot
Match: RRAA_BURTA (Regulator of ribonuclease activity A OS=Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301) GN=rraA PE=3 SV=1) HSP 1 Score: 192.2 bits (487), Expect = 2.724e-48 Identity = 88/162 (54.32%), Postives = 119/162 (73.46%), Query Frame = -1 Query: 137 LVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAEL 622 + T ++CDAN + + +G LR ++P+F+ +G + F+GP TLK+FEDN L+R LE+ G GRVLVVDGGGSLRCA++GGN A+ NGW GIVVNGC+RD E+ C GV ALA+HP K++K+G G VP+ + GTRI+ G+W+YAD DGIL+S A L Sbjct: 2 MFATTDLCDANEERLAAGTLRVIEPVFRSFGGVRRFAGPAATLKLFEDNTLVRAALEQDGAGRVLVVDGGGSLRCALVGGNLGKLAEKNGWVGIVVNGCVRDSAELAECRAGVLALAAHPRKSDKRGAGVSDVPVDVRGTRIAPGDWIYADADGILVSDAAL 163
BLAST of CN188238 vs. ExPASy Swiss-Prot
Match: RRAA_BURPS (Regulator of ribonuclease activity A OS=Burkholderia pseudomallei GN=rraA PE=3 SV=1) HSP 1 Score: 190.274 bits (482), Expect = 1.035e-47 Identity = 86/158 (54.43%), Postives = 117/158 (74.05%), Query Frame = -1 Query: 149 LVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILIS 622 + T ++CDA+ + +G LR L+P+F+ +G + F+GP TLK+FEDN L+R LE+ G GRVLVVDGGGSLRCA++GGN A+ NGWAGIVVNGC+RD DE+ C +GV ALA+HP K++K+G G P+ + GTRI G+W+YAD DG+L+S Sbjct: 2 MFATTDLCDAHEDRLAAGTLRVLEPVFRPFGGVRRFAGPAATLKLFEDNSLVRTALEQDGAGRVLVVDGGGSLRCALVGGNLGKLAEKNGWAGIVVNGCVRDSDELAECRVGVLALAAHPRKSDKRGAGVSDAPVDVRGTRIVPGDWIYADADGVLVS 159
BLAST of CN188238 vs. ExPASy Swiss-Prot
Match: RRAA_BURP6 (Regulator of ribonuclease activity A OS=Burkholderia pseudomallei (strain 668) GN=rraA PE=3 SV=1) HSP 1 Score: 190.274 bits (482), Expect = 1.035e-47 Identity = 86/158 (54.43%), Postives = 117/158 (74.05%), Query Frame = -1 Query: 149 LVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILIS 622 + T ++CDA+ + +G LR L+P+F+ +G + F+GP TLK+FEDN L+R LE+ G GRVLVVDGGGSLRCA++GGN A+ NGWAGIVVNGC+RD DE+ C +GV ALA+HP K++K+G G P+ + GTRI G+W+YAD DG+L+S Sbjct: 2 MFATTDLCDAHEDRLAAGTLRVLEPVFRPFGGVRRFAGPAATLKLFEDNSLVRTALEQDGAGRVLVVDGGGSLRCALVGGNLGKLAEKNGWAGIVVNGCVRDSDELAECRVGVLALAAHPRKSDKRGAGVSDAPVDVRGTRIVPGDWIYADADGVLVS 159
BLAST of CN188238 vs. ExPASy Swiss-Prot
Match: RRAA_BURP1 (Regulator of ribonuclease activity A OS=Burkholderia pseudomallei (strain 1710b) GN=rraA PE=3 SV=1) HSP 1 Score: 190.274 bits (482), Expect = 1.035e-47 Identity = 86/158 (54.43%), Postives = 117/158 (74.05%), Query Frame = -1 Query: 149 LVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILIS 622 + T ++CDA+ + +G LR L+P+F+ +G + F+GP TLK+FEDN L+R LE+ G GRVLVVDGGGSLRCA++GGN A+ NGWAGIVVNGC+RD DE+ C +GV ALA+HP K++K+G G P+ + GTRI G+W+YAD DG+L+S Sbjct: 2 MFATTDLCDAHEDRLAAGTLRVLEPVFRPFGGVRRFAGPAATLKLFEDNSLVRTALEQDGAGRVLVVDGGGSLRCALVGGNLGKLAEKNGWAGIVVNGCVRDSDELAECRVGVLALAAHPRKSDKRGAGVSDAPVDVRGTRIVPGDWIYADADGVLVS 159
BLAST of CN188238 vs. ExPASy Swiss-Prot
Match: RRAA_BURP0 (Regulator of ribonuclease activity A OS=Burkholderia pseudomallei (strain 1106a) GN=rraA PE=3 SV=1) HSP 1 Score: 190.274 bits (482), Expect = 1.035e-47 Identity = 86/158 (54.43%), Postives = 117/158 (74.05%), Query Frame = -1 Query: 149 LVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILIS 622 + T ++CDA+ + +G LR L+P+F+ +G + F+GP TLK+FEDN L+R LE+ G GRVLVVDGGGSLRCA++GGN A+ NGWAGIVVNGC+RD DE+ C +GV ALA+HP K++K+G G P+ + GTRI G+W+YAD DG+L+S Sbjct: 2 MFATTDLCDAHEDRLAAGTLRVLEPVFRPFGGVRRFAGPAATLKLFEDNSLVRTALEQDGAGRVLVVDGGGSLRCALVGGNLGKLAEKNGWAGIVVNGCVRDSDELAECRVGVLALAAHPRKSDKRGAGVSDAPVDVRGTRIVPGDWIYADADGVLVS 159 The following BLAST results are available for this feature:
BLAST of CN188238 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 185
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188238 ID=CN188238; Name=CN188238; organism=Citrus sinensis; type=EST; length=781bpback to top |