CN188225

Overview
NameCN188225
Unique NameCN188225
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length711
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CN188225_ssr18 microsatellite CN188225_ssr18:18..27. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig13557 contig Csv1_Contig13557:19..729. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN188225 vs. ExPASy Swiss-Prot
Match: ENO_RICCO (Enolase OS=Ricinus communis PE=2 SV=1)

HSP 1 Score: 394.43 bits (1012), Expect = 3.092e-109
Identity = 193/215 (89.77%), Postives = 204/215 (94.88%), Query Frame = 3
Query:   66 MAITITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFKEAMKMGVEVYHHLKAVIKKKYGQDAXNVGD 710
            MAITI +V+ARQIFDSRGNPTVE D+  SDGH+ARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAV NVN+IIGPAL GKDPTEQTA+DN+MVQ+LDGTVNEWGWCKQKLGANAILAVSLA+CKAGAHVK IPLYKHIA L+GNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGAS FKEAMKMG EVYHHLK+VIKKKYGQDA NVGD
Sbjct:    1 MAITIVSVRARQIFDSRGNPTVEADIKLSDGHLARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVENVNSIIGPALIGKDPTEQTALDNFMVQELDGTVNEWGWCKQKLGANAILAVSLALCKAGAHVKGIPLYKHIANLAGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFKEAMKMGAEVYHHLKSVIKKKYGQDATNVGD 215          
BLAST of CN188225 vs. ExPASy Swiss-Prot
Match: ENO1_HEVBR (Enolase 1 OS=Hevea brasiliensis GN=ENO1 PE=1 SV=1)

HSP 1 Score: 389.037 bits (998), Expect = 1.299e-107
Identity = 192/215 (89.30%), Postives = 201/215 (93.49%), Query Frame = 3
Query:   66 MAITITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFKEAMKMGVEVYHHLKAVIKKKYGQDAXNVGD 710
            MAITI +V+ARQIFDSRGNPTVE DV  SDG++ARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAV NVN IIGPAL GKDPT+Q  IDN+MVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVK IPLY+HIA L+GNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGAS FKEAMKMG EVYHHLK+VIKKKYGQDA NVGD
Sbjct:    1 MAITIVSVRARQIFDSRGNPTVEADVKLSDGYLARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVENVNIIIGPALVGKDPTDQVGIDNFMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKGIPLYEHIANLAGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFKEAMKMGAEVYHHLKSVIKKKYGQDATNVGD 215          
BLAST of CN188225 vs. ExPASy Swiss-Prot
Match: ENO2_HEVBR (Enolase 2 OS=Hevea brasiliensis GN=ENO2 PE=1 SV=1)

HSP 1 Score: 388.267 bits (996), Expect = 2.216e-107
Identity = 191/215 (88.84%), Postives = 200/215 (93.02%), Query Frame = 3
Query:   66 MAITITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFKEAMKMGVEVYHHLKAVIKKKYGQDAXNVGD 710
            MAITI +V+ARQIFDSRGNPTVE DV  SDG++ARAAVP GASTGIYEALELRDGGSDYLGKGVSKAV NVN IIGPAL GKDPT+Q  IDN+MVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVK IPLYKH+A L+GNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGAS FKEAMKMG EVYHHLK+VIKKKYGQDA NVGD
Sbjct:    1 MAITIVSVRARQIFDSRGNPTVEADVKLSDGYLARAAVPRGASTGIYEALELRDGGSDYLGKGVSKAVENVNIIIGPALVGKDPTDQVGIDNFMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKGIPLYKHVANLAGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFKEAMKMGAEVYHHLKSVIKKKYGQDATNVGD 215          
BLAST of CN188225 vs. ExPASy Swiss-Prot
Match: ENO1_MAIZE (Enolase 1 OS=Zea mays GN=ENO1 PE=2 SV=1)

HSP 1 Score: 377.867 bits (969), Expect = 2.995e-104
Identity = 189/215 (87.91%), Postives = 197/215 (91.63%), Query Frame = 3
Query:   66 MAITITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFKEAMKMGVEVYHHLKAVIKKKYGQDAXNVGD 710
            MA+TIT VKARQIFDSRGNPTVEVDV  SDG  AR AVPSGASTGIYEALELRDGGSDYLGKGV KAVSNVN IIGPA+ GKDPTEQ  IDN+MVQQLDGT NEWGWCKQKLGANAILAVSLAVCKAGA VKKIPLY+HIA L+GNK LVLPVPAFNVINGGSHAGNKLAMQEFMILP GAS FKEAMKMGVEVYH+LK++IKKKYGQDA NVGD
Sbjct:    1 MAVTITWVKARQIFDSRGNPTVEVDVGLSDGSYARGAVPSGASTGIYEALELRDGGSDYLGKGVLKAVSNVNNIIGPAIVGKDPTEQVEIDNFMVQQLDGTSNEWGWCKQKLGANAILAVSLAVCKAGAMVKKIPLYQHIANLAGNKTLVLPVPAFNVINGGSHAGNKLAMQEFMILPTGASSFKEAMKMGVEVYHNLKSIIKKKYGQDATNVGD 215          
BLAST of CN188225 vs. ExPASy Swiss-Prot
Match: ENO2_MAIZE (Enolase 2 OS=Zea mays GN=ENO2 PE=2 SV=1)

HSP 1 Score: 375.555 bits (963), Expect = 1.486e-103
Identity = 186/215 (86.51%), Postives = 198/215 (92.09%), Query Frame = 3
Query:   66 MAITITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFKEAMKMGVEVYHHLKAVIKKKYGQDAXNVGD 710
            MA TI +VKARQIFDSRGNPTVEVDV  SDG  ARAAVPSGASTG+YEALELRDGGS YLGKGVSKAV+NVN++IGPAL GKDPT QT IDN+MVQQLDGT NEWGWCKQKLGANAILAVSLAVCKAGA +K+IPLY+HIA L+GNK LVLPVPAFNVINGGSHAGNKLAMQEFMILP GA+ FKEAMKMGVEVYHHLK+VIKKKYGQDA NVGD
Sbjct:    1 MAATIQSVKARQIFDSRGNPTVEVDVFCSDGTFARAAVPSGASTGVYEALELRDGGSYYLGKGVSKAVNNVNSVIGPALIGKDPTAQTEIDNFMVQQLDGTKNEWGWCKQKLGANAILAVSLAVCKAGASIKRIPLYQHIANLAGNKQLVLPVPAFNVINGGSHAGNKLAMQEFMILPTGAASFKEAMKMGVEVYHHLKSVIKKKYGQDATNVGD 215          
BLAST of CN188225 vs. ExPASy Swiss-Prot
Match: ENO_MESCR (Enolase OS=Mesembryanthemum crystallinum GN=PGH1 PE=2 SV=1)

HSP 1 Score: 373.244 bits (957), Expect = 7.376e-103
Identity = 182/213 (85.45%), Postives = 195/213 (91.55%), Query Frame = 3
Query:   72 ITITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFKEAMKMGVEVYHHLKAVIKKKYGQDAXNVGD 710
            +TI  VKARQI+DSRGNPTVE D+   DG  ARAAVPSGASTG+YEALELRDGG DY+GKGV KAV NVN IIGPAL GKDPT+QTAIDN+MVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGA VKKIPLY+HIAE++GNKN+VLPVPAFNVINGGSHAGNKLAMQEFMILP GAS FKEAMKMG EVYH+LK+VIKKKYGQDA NVGD
Sbjct:    2 VTIKCVKARQIYDSRGNPTVEADIHLDDGTYARAAVPSGASTGVYEALELRDGGKDYMGKGVYKAVKNVNEIIGPALVGKDPTQQTAIDNFMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAQVKKIPLYQHIAEIAGNKNMVLPVPAFNVINGGSHAGNKLAMQEFMILPTGASSFKEAMKMGSEVYHNLKSVIKKKYGQDATNVGD 214          
BLAST of CN188225 vs. ExPASy Swiss-Prot
Match: ENO_SOLLC (Enolase OS=Solanum lycopersicum GN=PGH1 PE=2 SV=1)

HSP 1 Score: 372.089 bits (954), Expect = 1.643e-102
Identity = 183/212 (86.32%), Postives = 197/212 (92.92%), Query Frame = 3
Query:   75 TITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFKEAMKMGVEVYHHLKAVIKKKYGQDAXNVGD 710
            TI ++KARQIFDSRGNPTVEVDV  S+G  ARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAV+NVN+IIGPAL GKDPT+QT +DN+MV QLDGT NEWGWCK+KLGANAILAVSLAVCKAGA V+ +PLYKHIA+L+GNK LVLPVPAFNVINGGSHAGNKLAMQEFMILPVGA+ FKEAMKMG EVYHHLKAVIKKKYGQDA NVGD
Sbjct:    3 TIKSIKARQIFDSRGNPTVEVDVHISNGVFARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVNNVNSIIGPALVGKDPTDQTGLDNFMVHQLDGTQNEWGWCKEKLGANAILAVSLAVCKAGAAVRNVPLYKHIADLAGNKKLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGAANFKEAMKMGCEVYHHLKAVIKKKYGQDATNVGD 214          
BLAST of CN188225 vs. ExPASy Swiss-Prot
Match: ENO_ORYSJ (Enolase OS=Oryza sativa subsp. japonica GN=ENO1 PE=1 SV=2)

HSP 1 Score: 372.089 bits (954), Expect = 1.643e-102
Identity = 183/215 (85.12%), Postives = 196/215 (91.16%), Query Frame = 3
Query:   66 MAITITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFKEAMKMGVEVYHHLKAVIKKKYGQDAXNVGD 710
            MA TI +VKARQIFDSRGNPTVEVDV  SDG  ARAAVPSGASTG+YEALELRDGGSDYLGKGVSKAV NVN++I PAL GKDPT Q  +DN+MVQQLDGT NEWGWCKQKLGANAILAVSLA+CKAGA +KKIPLY+HIA L+GNK LVLPVPAFNVINGGSHAGNKLAMQEFMILP GA+ FKEAMKMGVEVYH+LK+VIKKKYGQDA NVGD
Sbjct:    1 MAATIVSVKARQIFDSRGNPTVEVDVCCSDGTFARAAVPSGASTGVYEALELRDGGSDYLGKGVSKAVDNVNSVIAPALIGKDPTSQAELDNFMVQQLDGTKNEWGWCKQKLGANAILAVSLAICKAGAIIKKIPLYQHIANLAGNKQLVLPVPAFNVINGGSHAGNKLAMQEFMILPTGAASFKEAMKMGVEVYHNLKSVIKKKYGQDATNVGD 215          
BLAST of CN188225 vs. ExPASy Swiss-Prot
Match: ENO_ALNGL (Enolase OS=Alnus glutinosa GN=PGH1 PE=2 SV=1)

HSP 1 Score: 370.548 bits (950), Expect = 4.781e-102
Identity = 187/212 (88.21%), Postives = 196/212 (92.45%), Query Frame = 3
Query:   78 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAID-NYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFKEAMKMGVEVYHHLKAVIKKKYGQDAXNVGD 710
            IT +KARQIFDSRGNPTVE +VTT++G V+RAAVPSGASTG+YEALELRDGGSDYLGKGV KAV NVN IIGPAL GKD TEQTAID ++M QQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGA VKKIPLYKHIA L+GN  LVLPVPAFNVINGGSHAGNKLAMQEFMILPVGAS FKEAMKMGVEVYHHLKAVIKKKYGQDA NVGD
Sbjct:    4 ITHIKARQIFDSRGNPTVEAEVTTANGVVSRAAVPSGASTGVYEALELRDGGSDYLGKGVLKAVDNVNKIIGPALIGKDATEQTAIDIDFMFQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGASVKKIPLYKHIANLAGNPKLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGD 215          
BLAST of CN188225 vs. ExPASy Swiss-Prot
Match: ENO_ARATH (Enolase OS=Arabidopsis thaliana GN=ENO PE=1 SV=1)

HSP 1 Score: 368.622 bits (945), Expect = 1.817e-101
Identity = 184/212 (86.79%), Postives = 193/212 (91.04%), Query Frame = 3
Query:   75 TITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASCFKEAMKMGVEVYHHLKAVIKKKYGQDAXNVGD 710
            TIT VKARQIFDSRGNPTVEVD+ TS+G    AAVPSGASTGIYEALELRDGGSDYLGKGVSKAV NVN IIGPAL GKDPT+QTAIDN+MV +LDGT NEWGWCKQKLGANAILAVSLAVCKAGA V  IPLYKHIA L+GN  +VLPVPAFNVINGGSHAGNKLAMQEFMILPVGA+ FKEAMKMGVEVYHHLK+VIKKKYGQDA NVGD
Sbjct:    3 TITVVKARQIFDSRGNPTVEVDIHTSNGIKVTAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVGNVNNIIGPALIGKDPTQQTAIDNFMVHELDGTQNEWGWCKQKLGANAILAVSLAVCKAGAVVSGIPLYKHIANLAGNPKIVLPVPAFNVINGGSHAGNKLAMQEFMILPVGAASFKEAMKMGVEVYHHLKSVIKKKYGQDATNVGD 214          
The following BLAST results are available for this feature:
BLAST of CN188225 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ENO_RICCO3.092e-10989.77Enolase OS=Ricinus communis PE=2 SV=1[more]
ENO1_HEVBR1.299e-10789.30Enolase 1 OS=Hevea brasiliensis GN=ENO1 PE=1 SV=1[more]
ENO2_HEVBR2.216e-10788.84Enolase 2 OS=Hevea brasiliensis GN=ENO2 PE=1 SV=1[more]
ENO1_MAIZE2.995e-10487.91Enolase 1 OS=Zea mays GN=ENO1 PE=2 SV=1[more]
ENO2_MAIZE1.486e-10386.51Enolase 2 OS=Zea mays GN=ENO2 PE=2 SV=1[more]
ENO_MESCR7.376e-10385.45Enolase OS=Mesembryanthemum crystallinum GN=PGH1 P... [more]
ENO_SOLLC1.643e-10286.32Enolase OS=Solanum lycopersicum GN=PGH1 PE=2 SV=1[more]
ENO_ORYSJ1.643e-10285.12Enolase OS=Oryza sativa subsp. japonica GN=ENO1 PE... [more]
ENO_ALNGL4.781e-10288.21Enolase OS=Alnus glutinosa GN=PGH1 PE=2 SV=1[more]
ENO_ARATH1.817e-10186.79Enolase OS=Arabidopsis thaliana GN=ENO PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0005L03_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0005L03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188225 ID=CN188225; Name=CN188225; organism=Citrus sinensis; type=EST; length=711bp
ATGCTCGCACTCACAGACTCTCTCTCTCGTTCTAGATCTTTCTTCGGTTT
TCCAGTTTTCAGAAAATGGCAATAACCATCACTGCCGTCAAAGCCAGGCA
GATCTTTGACAGCCGTGGAAATCCAACGGTGGAGGTCGACGTGACAACAT
CAGATGGCCACGTGGCTAGAGCTGCTGTTCCAAGCGGTGCATCCACCGGA
ATTTATGAGGCGCTTGAACTAAGAGACGGAGGCTCTGATTACCTAGGCAA
GGGTGTATCGAAAGCTGTTAGCAATGTCAACGCCATCATTGGCCCTGCAC
TCGCTGGCAAGGACCCAACTGAGCAGACTGCTATTGACAACTATATGGTA
CAACAACTTGATGGAACTGTAAATGAGTGGGGTTGGTGCAAACAGAAGCT
TGGAGCAAACGCCATTTTGGCTGTCTCCCTAGCTGTCTGCAAGGCTGGTG
CACATGTCAAGAAGATTCCTCTTTACAAGCATATTGCCGAACTCTCTGGT
AACAAGAATTTGGTGTTGCCAGTGCCAGCATTCAATGTCATTAATGGTGG
ATCACATGCTGGAAACAAACTTGCTATGCAGGAGTTTATGATTCTTCCTG
TAGGAGCTTCCTGTTTCAAAGAAGCCATGAAGATGGGTGTAGAAGTATAT
CACCATCTGAAGGCTGTGATTAAAAAGAAATACGGCCAGGATGCTANCAA
TGTTGGTGATG
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