CN188219

Overview
NameCN188219
Unique NameCN188219
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length774
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN188219 vs. ExPASy Swiss-Prot
Match: UFOG_PETHY (Anthocyanidin 3-O-glucosyltransferase OS=Petunia hybrida GN=RT PE=2 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.343e-23
Identity = 72/223 (32.29%), Postives = 111/223 (49.78%), Query Frame = 1
Query:  112 NSKLQIAMFPWLAFGHMIPWLELAKLIAQKGHKIFFISTPRNIDRLPRLPQNLASMIQFVKISLPHVDNLRENAEATIDLPYDEVKYLKQSFDCLEEPMAKLLQSLAPDWLLFDFAAYWLPARARELDIPSGFFSIFTAATLGYFG-PSSVLINDSGDHLKTPEDYTRVPSWVSFPTT--ISYRLFEARKVFDILISDESNVSHGYRFGQSLKGCDIVAVRTC 771
            N  L + MFP+ AFGH+ P+++LA  ++  G K+ F +   N  R+  +  N A     V ++LPHV+ L   AE+T +L     + LK + D ++  +  LL  L P ++LFDFA  WLP  A  L I + ++S+  A +  +   P+ VL       L   ED  + P  + FP T   S R FEAR    +  S  +  +   R    L+GC  +  +TC
Sbjct:    9 NDALHVVMFPFFAFGHISPFVQLANKLSSYGVKVSFFTASGNASRVKSM-LNSAPTTHIVPLTLPHVEGLPPGAESTAELTPASAELLKVALDLMQPQIKTLLSHLKPHFVLFDFAQEWLPKMANGLGIKTVYYSVVVALSTAFLTCPARVLEPKKYPSL---EDMKKPP--LGFPQTSVTSVRTFEARDFLYVFKSFHNGPTLYDRIQSGLRGCSAILAKTC 225          
BLAST of CN188219 vs. ExPASy Swiss-Prot
Match: FLRT_CITMA (Flavanone 7-O-glucoside 2''-O-beta-L-rhamnosyltransferase OS=Citrus maxima GN=C12RT1 PE=1 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 6.252e-13
Identity = 45/144 (31.25%), Postives = 73/144 (50.69%), Query Frame = 1
Query:  118 KLQIAMFPWLAFGHMIPWLELAKLIAQKGHKIFFISTPRNIDRLPR-LPQNLASMIQFVKISLPHV-DNLRENAEATIDLPYDEVKYLKQSFDCLEEPMAKLLQSLAPDWLLFDFAAYWLPARARELDIPSGFFSIFTAATLGY 543
            K  I M PWLA GH+ P LELAK ++QK   I+F STP N+    R + +N +S IQ +++ LP+    L    + T +LP   +  L  +F+  +     +L++L P  +++D         A + DI +  F   +A    +
Sbjct:    8 KPSILMLPWLAHGHIAPHLELAKKLSQKNFHIYFCSTPNNLQSFGRNVEKNFSSSIQLIELQLPNTFPELPSQNQTTKNLPPHLIYTLVGAFEDAKPAFCNILETLKPTLVMYDLFQPMAAEAAYQYDIAAILFLPLSAVACSF 151          
The following BLAST results are available for this feature:
BLAST of CN188219 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
UFOG_PETHY1.343e-2332.29Anthocyanidin 3-O-glucosyltransferase OS=Petunia h... [more]
FLRT_CITMA6.252e-1331.25Flavanone 7-O-glucoside 2''-O-beta-L-rhamnosyltran... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS05_0005K24_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0005K24, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188219 ID=CN188219; Name=CN188219; organism=Citrus sinensis; type=EST; length=774bp
GAGGCTCAAGTGCTCCTTATTTAGCTAGGTGGCAAAACCGATCTTCCCTT
GCCATGCTTATATAATAATATTCTTTCACTAGTCTTGTTGCAGATTGCTG
TCATGGCTGACAACAGCAAGCTTCAAATCGCCATGTTTCCATGGTTAGCT
TTTGGTCACATGATCCCCTGGTTGGAGCTTGCTAAGCTGATAGCACAGAA
AGGTCACAAAATCTTCTTCATTTCCACCCCTAGAAACATCGATCGCCTCC
CAAGACTCCCTCAAAATTTAGCTTCTATGATTCAATTTGTGAAAATCTCG
TTGCCCCACGTGGACAATCTCCGCGAAAACGCAGAAGCGACCATCGATTT
ACCTTACGATGAAGTTAAGTATCTCAAGCAATCTTTCGATTGCCTCGAAG
AGCCCATGGCAAAGCTGTTACAATCTTTAGCTCCTGACTGGCTTTTATTC
GACTTCGCCGCTTACTGGCTACCGGCTAGAGCCCGTGAACTCGACATCCC
AAGCGGGTTCTTCAGTATATTTACTGCGGCAACTCTCGGATACTTTGGCC
CGTCATCAGTTTTGATCAACGATTCTGGTGATCACCTCAAGACTCCCGAA
GATTACACAAGGGTACCCAGCTGGGTCTCGTTTCCGACAACAATATCCTA
TCGGCTTTTTGAGGCGAGGAAGGTCTTCGACATTCTAATAAGCGACGAAT
CGAACGTTTCACACGGTTACCGTTTTGGTCAATCACTCAAAGGCTGCGAC
ATCGTTGCCGTGAGAACCTGCATG
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