EY666013

Overview
NameEY666013
Unique NameEY666013
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length941
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY666013 vs. ExPASy Swiss-Prot
Match: PX11D_ARATH (Peroxisomal membrane protein 11D OS=Arabidopsis thaliana GN=PEX11D PE=1 SV=2)

HSP 1 Score: 295.434 bits (755), Expect = 3.063e-79
Identity = 155/210 (73.81%), Postives = 170/210 (80.95%), Query Frame = 3
Query:   54 STLDATRAELALVVLYLNKAEARDKICRAIQYGSKFLSDGQPGTAQNVDKSTSLARKVFRLSKFVNDLHALISPVPQGTPLPLVLLGKSKNALLSTFLFLDQVVWLGRSGIYKNKERAELLGRISLFCWMGSSVCSTLVELGELGRLSTSMXXXXXXXXXXXXXXNEQYQANLKKSMRGL*HLSNQPWKLVGAGGLVPFGPQKRLLPRVT 683
            +TLD +RAELALVV+YLNKAEARDK+CRAIQYGSKFLS GQPGTAQNVDKSTSLARKVFRL KFVNDLH LISPVP+GTPLPLVLLGKSKNALLSTFLFLDQ+VWLGRSGIYKNKERAELLGRISLFCWMGSSVC+TLVE+GE+GRLS+SM              +E Y+A LKKS      L      +V A GL+   P K + PRVT
Sbjct:    3 TTLDVSRAELALVVMYLNKAEARDKLCRAIQYGSKFLSGGQPGTAQNVDKSTSLARKVFRLFKFVNDLHGLISPVPKGTPLPLVLLGKSKNALLSTFLFLDQIVWLGRSGIYKNKERAELLGRISLFCWMGSSVCTTLVEVGEMGRLSSSMKKIEKGLKNGNKYQDEDYRAKLKKSNERSLALIKSAMDIVVAAGLLQLAPTK-ITPRVT 211          
BLAST of EY666013 vs. ExPASy Swiss-Prot
Match: PX11C_ARATH (Peroxisomal membrane protein 11C OS=Arabidopsis thaliana GN=PEX11C PE=1 SV=1)

HSP 1 Score: 293.508 bits (750), Expect = 1.164e-78
Identity = 154/211 (72.99%), Postives = 173/211 (81.99%), Query Frame = 3
Query:   51 MSTLDATRAELALVVLYLNKAEARDKICRAIQYGSKFLSDGQPGTAQNVDKSTSLARKVFRLSKFVNDLHALISPVPQGTPLPLVLLGKSKNALLSTFLFLDQVVWLGRSGIYKNKERAELLGRISLFCWMGSSVCSTLVELGELGRLSTSMXXXXXXXXXXXXXXNEQYQANLKKSMRGL*HLSNQPWKLVGAGGLVPFGPQKRLLPRVT 683
            MSTL+ TRAEL LVV+YLNKAEARDKICRAIQYGSKFLSDGQPGTAQNVDK+TSLARKVFRL KFVNDLHALISPVP+GTPLPLVLLGKSKNALLSTFLFLDQ+VWLGR+GIYK+KERAE+LGRISLFCWMGSSVC++LVE+GELGRLS S+              NEQY+A ++KS      L      +V A GL+   P K++ PRVT
Sbjct:    1 MSTLETTRAELGLVVVYLNKAEARDKICRAIQYGSKFLSDGQPGTAQNVDKNTSLARKVFRLFKFVNDLHALISPVPKGTPLPLVLLGKSKNALLSTFLFLDQIVWLGRTGIYKDKERAEILGRISLFCWMGSSVCTSLVEVGELGRLSASIKKLEKEIGNKDKHQNEQYRAKVEKSNERSLALIKAGMDVVVAFGLLQLAP-KKVTPRVT 210          
BLAST of EY666013 vs. ExPASy Swiss-Prot
Match: PX11E_ARATH (Peroxisomal membrane protein 11E OS=Arabidopsis thaliana GN=PEX11E PE=1 SV=1)

HSP 1 Score: 280.411 bits (716), Expect = 1.020e-74
Identity = 150/211 (71.09%), Postives = 167/211 (79.15%), Query Frame = 3
Query:   51 MSTLDATRAELALVVLYLNKAEARDKICRAIQYGSKFLSDGQPGTAQNVDKSTSLARKVFRLSKFVNDLHALISPVPQGTPLPLVLLGKSKNALLSTFLFLDQVVWLGRSGIYKNKERAELLGRISLFCWMGSSVCSTLVELGELGRLSTSMXXXXXXXXXXXXXXNEQYQANLKKSMRGL*HLSNQPWKLVGAGGLVPFGPQKRLLPRVT 683
            M+TLD TRAELAL+VLYLNKAEARDKICRAIQYGSKFLS GQPGTAQ VDK+TSLARKVFRL KFVND H LISPVP+GTPLPLVLLGKSKNALLSTFLFLDQ+VWLGRSGIYKNKER ELLGRISLFCW+GSSVC++ VE+GELGRLS+SM              +E Y+A L+KS      L      ++ A GL+   P K + PRVT
Sbjct:    1 MTTLDLTRAELALIVLYLNKAEARDKICRAIQYGSKFLSGGQPGTAQTVDKNTSLARKVFRLFKFVNDFHGLISPVPKGTPLPLVLLGKSKNALLSTFLFLDQIVWLGRSGIYKNKERTELLGRISLFCWLGSSVCTSAVEIGELGRLSSSM----KKMEKELKADDELYRAKLQKSNDRTLALIKSSMDIIVAIGLLQLAP-KTISPRVT 206          
BLAST of EY666013 vs. ExPASy Swiss-Prot
Match: PX111_ORYSJ (Peroxisomal membrane protein 11-1 OS=Oryza sativa subsp. japonica GN=PEX11-1 PE=2 SV=1)

HSP 1 Score: 267.314 bits (682), Expect = 8.932e-71
Identity = 143/211 (67.77%), Postives = 164/211 (77.73%), Query Frame = 3
Query:   51 MSTLDATRAELALVVLYLNKAEARDKICRAIQYGSKFLSDGQPGTAQNVDKSTSLARKVFRLSKFVNDLHALISPVPQGTPLPLVLLGKSKNALLSTFLFLDQVVWLGRSGIYKNKERAELLGRISLFCWMGSSVCSTLVELGELGRLSTSMXXXXXXXXXXXXXXNEQYQANLKKSMRGL*HLSNQPWKLVGAGGLVPFGPQKRLLPRVT 683
            MSTLDATRAEL LVVLYLNKAEARDKICRAIQYGSKF+S+GQPGTAQ+VD+ST+LARKVFRL K+VNDLH LISP  +GTPL LVLLGKSKNALLSTFLFLDQ VWLGR+GIYKNKER + + RISL+CWM SSVC+ LVELGEL RLS SM              N+QY++ +K+S   L  L      +V A GL+   P K++ PRVT
Sbjct:    1 MSTLDATRAELGLVVLYLNKAEARDKICRAIQYGSKFISNGQPGTAQDVDRSTTLARKVFRLLKWVNDLHGLISPPAKGTPLTLVLLGKSKNALLSTFLFLDQFVWLGRTGIYKNKERTDRIVRISLYCWMASSVCAGLVELGELKRLSKSMRKLARELRDTDKYENDQYKSKMKQSDERLLALVKAAMDVVVAVGLLQLSP-KKITPRVT 210          
BLAST of EY666013 vs. ExPASy Swiss-Prot
Match: PX115_ORYSJ (Peroxisomal membrane protein 11-5 OS=Oryza sativa subsp. japonica GN=PEX11-5 PE=2 SV=1)

HSP 1 Score: 258.84 bits (660), Expect = 3.177e-68
Identity = 139/228 (60.96%), Postives = 168/228 (73.68%), Query Frame = 3
Query:   51 MSTLDATRAELALVVLYLNKAEARDKICRAIQYGSKFLSDGQPGTAQNVDKSTSLARKVFRLSKFVNDLHALISPVPQGTPLPLVLLGKSKNALLSTFLFLDQVVWLGRSGIYKNKERAELLGRISLFCWMGSSVCSTLVELGELGRLSTSMXXXXXXXXXXXXXXNEQYQANLKKSMRGL*HLSNQPWKLVGAGGLVPFGPQKRLLPRVTRGIWEWIPSSHLLGYQL 734
            MS+L++ RA+LAL++LYLNKAEARDKICRAIQYGSKF+S+GQPG AQNVDKSTSLARKVFRL KFVNDLHALISP  +GTPLPL+LLGKSKNALLSTFLFLDQ+VW GR+GIYKNKERAE L +I+ +C++GS+ C++++E+ EL RLS SM              NEQYQ  L+K       L      +V A GL+   P K++ PRVT        SS +  YQL
Sbjct:    1 MSSLESARADLALLILYLNKAEARDKICRAIQYGSKFVSNGQPGPAQNVDKSTSLARKVFRLFKFVNDLHALISPPAKGTPLPLILLGKSKNALLSTFLFLDQIVWAGRTGIYKNKERAEFLSKIAFYCFLGSNTCTSIIEVAELQRLSKSMKKLEKELKHQELLKNEQYQMKLQKCNERRLALIKSSLDIVVAIGLLQLAP-KKVTPRVTGAF--GFASSLIACYQL 225          
The following BLAST results are available for this feature:
BLAST of EY666013 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
PX11D_ARATH3.063e-7973.81Peroxisomal membrane protein 11D OS=Arabidopsis th... [more]
PX11C_ARATH1.164e-7872.99Peroxisomal membrane protein 11C OS=Arabidopsis th... [more]
PX11E_ARATH1.020e-7471.09Peroxisomal membrane protein 11E OS=Arabidopsis th... [more]
PX111_ORYSJ8.932e-7167.77Peroxisomal membrane protein 11-1 OS=Oryza sativa ... [more]
PX115_ORYSJ3.177e-6860.96Peroxisomal membrane protein 11-5 OS=Oryza sativa ... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-102-011-G04-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY666013 ID=EY666013; Name=EY666013; organism=Citrus sinensis; type=EST; length=941bp
CCACGCGTCCGTTCGAGGCCAAATCGTTGCGCACTTTTTTCGGATAAAAA
ATGAGTACACTGGATGCAACCAGAGCAGAACTTGCACTTGTGGTTTTGTA
TTTGAATAAGGCTGAAGCCAGGGACAAGATATGCAGAGCTATACAATATG
GTTCAAAATTCTTGAGTGATGGACAGCCTGGTACTGCCCAAAATGTTGAC
AAGTCAACCAGCTTAGCCCGGAAAGTTTTCCGTCTTTCTAAGTTTGTCAA
TGATTTGCACGCTCTTATCAGCCCAGTTCCCCAAGGAACTCCGCTACCAC
TTGTTTTGCTGGGAAAGTCCAAGAACGCATTATTGTCAACTTTCTTATTT
CTTGATCAAGTCGTTTGGCTTGGCAGATCAGGCATCTACAAGAACAAAGA
GCGTGCAGAATTGCTTGGTCGGATATCTCTTTTTTGTTGGATGGGTTCCT
CAGTTTGTAGCACATTAGTTGAGCTTGGAGAGCTTGGGAGGCTTTCTACA
TCAATGAAAAAGTTAAAGAAGGAGCTTAAGGACAGTGATAAGCATAAAAA
TGAACAATACCAAGCTAACCTTAAAAAATCAATGAGAGGTCTCTAGCACT
TGTCAAATCAGCCATGGAAATTGGTGGGGGCGGGTGGGCTGGTTCCATTT
GGCCCCCAAAAAAGGTTACTCCCTCGGGTAACGAGAGGCATTTGGGAGTG
GATACCCTCCTCCCATCTCCTTGGTTATCAGCTACATTCACAGTGCCAGA
AAGAAAGCCACGGCACCCTGGAATGGGAAAGGGCGGATTTTGCTGGCCAC
GAGCTTCAATGGACATCTAGAACGATTCTATCGGAACGAGGTCATACTGA
CATCCAAAGGAGTGGGGAGCTGGGCCCGTGGCTCCGAGTCGCGCCACCCT
GGTAGAGGGGGGGAACGGAGATATTGCCACTTACGAAGAAC
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