CN188196

Overview
NameCN188196
Unique NameCN188196
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length673
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11165 contig Csv1_Contig11165:96..751. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN188196 vs. ExPASy Swiss-Prot
Match: CATA2_ARATH (Catalase-2 OS=Arabidopsis thaliana GN=CAT2 PE=1 SV=3)

HSP 1 Score: 313.153 bits (801), Expect = 7.730e-102
Identity = 147/152 (96.71%), Postives = 152/152 (100.00%), Query Frame = 2
Query:  218 GPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRIVDFFSHHPESLHMFSFL 673
            GPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHD+SNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFF+RDGMKFPDMVHALKPNPKSHIQENWRI+DFFSHHPESL+MF+FL
Sbjct:   38 GPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDISNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFIRDGMKFPDMVHALKPNPKSHIQENWRILDFFSHHPESLNMFTFL 189          

HSP 2 Score: 79.7221 bits (195), Expect = 7.730e-102
Identity = 33/37 (89.19%), Postives = 37/37 (100.00%), Query Frame = 3
Query:   90 MDPYKFRPASSFNAPFFTTNSGAPVWNNNSSMTIGPR 200
            MDPYK+RPASS+N+PFFTTNSGAPVWNNNSSMT+GPR
Sbjct:    1 MDPYKYRPASSYNSPFFTTNSGAPVWNNNSSMTVGPR 37          
BLAST of CN188196 vs. ExPASy Swiss-Prot
Match: CATA2_GOSHI (Catalase isozyme 2 OS=Gossypium hirsutum GN=CAT2 PE=2 SV=1)

HSP 1 Score: 312.383 bits (799), Expect = 1.578e-99
Identity = 146/152 (96.05%), Postives = 151/152 (99.34%), Query Frame = 2
Query:  218 GPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRIVDFFSHHPESLHMFSFL 673
            GPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHD+S LTCADFLRAPGVQTP+IVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFF+RDGMKFPDMVHALKPNPKSHIQENWRI+DFFSHHPESLHMF+FL
Sbjct:   38 GPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDISQLTCADFLRAPGVQTPLIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFIRDGMKFPDMVHALKPNPKSHIQENWRILDFFSHHPESLHMFTFL 189          

HSP 2 Score: 72.7886 bits (177), Expect = 1.578e-99
Identity = 30/37 (81.08%), Postives = 36/37 (97.30%), Query Frame = 3
Query:   90 MDPYKFRPASSFNAPFFTTNSGAPVWNNNSSMTIGPR 200
            MDPYKFRP+SSF++PF+TTNSGAPVWNNNSS+T+G R
Sbjct:    1 MDPYKFRPSSSFDSPFWTTNSGAPVWNNNSSLTVGAR 37          
BLAST of CN188196 vs. ExPASy Swiss-Prot
Match: CATA3_NICPL (Catalase isozyme 3 OS=Nicotiana plumbaginifolia GN=CAT3 PE=2 SV=1)

HSP 1 Score: 314.309 bits (804), Expect = 2.686e-99
Identity = 148/152 (97.37%), Postives = 152/152 (100.00%), Query Frame = 2
Query:  218 GPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRIVDFFSHHPESLHMFSFL 673
            GPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHD+++LTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRI+DFFSHHPESLHMFSFL
Sbjct:   38 GPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDITHLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRILDFFSHHPESLHMFSFL 189          

HSP 2 Score: 70.0922 bits (170), Expect = 2.686e-99
Identity = 29/37 (78.38%), Postives = 35/37 (94.59%), Query Frame = 3
Query:   90 MDPYKFRPASSFNAPFFTTNSGAPVWNNNSSMTIGPR 200
            MDPYK+RP+S+ N+PF+TTNSGAPVWNNNSSMT+G R
Sbjct:    1 MDPYKYRPSSANNSPFWTTNSGAPVWNNNSSMTVGTR 37          
BLAST of CN188196 vs. ExPASy Swiss-Prot
Match: CATA_SOLAP (Catalase OS=Soldanella alpina PE=2 SV=1)

HSP 1 Score: 314.309 bits (804), Expect = 5.964e-99
Identity = 148/152 (97.37%), Postives = 152/152 (100.00%), Query Frame = 2
Query:  218 GPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRIVDFFSHHPESLHMFSFL 673
            GPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHD+S+LTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRI+DFFSHHPESLHMF+FL
Sbjct:   38 GPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDISHLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRILDFFSHHPESLHMFTFL 189          

HSP 2 Score: 68.9366 bits (167), Expect = 5.964e-99
Identity = 28/37 (75.68%), Postives = 34/37 (91.89%), Query Frame = 3
Query:   90 MDPYKFRPASSFNAPFFTTNSGAPVWNNNSSMTIGPR 200
            MDPYK+R +S+FN PF+TTNSGAPVWNNNSS+T+G R
Sbjct:    1 MDPYKYRSSSAFNTPFWTTNSGAPVWNNNSSLTVGTR 37          
BLAST of CN188196 vs. ExPASy Swiss-Prot
Match: CATA3_SOYBN (Catalase-3 OS=Glycine max GN=CAT3 PE=2 SV=1)

HSP 1 Score: 313.153 bits (801), Expect = 7.780e-99
Identity = 147/152 (96.71%), Postives = 152/152 (100.00%), Query Frame = 2
Query:  218 GPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRIVDFFSHHPESLHMFSFL 673
            GPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHD+S+LTCADFLRAPGVQTP+IVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDG+KFPDMVHALKPNPKSHIQENWRI+DFFSHHPESLHMFSFL
Sbjct:   38 GPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDISHLTCADFLRAPGVQTPLIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGLKFPDMVHALKPNPKSHIQENWRILDFFSHHPESLHMFSFL 189          

HSP 2 Score: 69.707 bits (169), Expect = 7.780e-99
Identity = 28/37 (75.68%), Postives = 35/37 (94.59%), Query Frame = 3
Query:   90 MDPYKFRPASSFNAPFFTTNSGAPVWNNNSSMTIGPR 200
            MDPYK RP+S+FN+PF+TTNSGAP+WNNNSS+T+G R
Sbjct:    1 MDPYKNRPSSAFNSPFWTTNSGAPIWNNNSSLTVGSR 37          
BLAST of CN188196 vs. ExPASy Swiss-Prot
Match: CATA1_SOYBN (Catalase-1/2 OS=Glycine max GN=CAT1 PE=2 SV=1)

HSP 1 Score: 313.153 bits (801), Expect = 7.780e-99
Identity = 147/152 (96.71%), Postives = 152/152 (100.00%), Query Frame = 2
Query:  218 GPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRIVDFFSHHPESLHMFSFL 673
            GPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHD+S+LTCADFLRAPGVQTP+IVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDG+KFPDMVHALKPNPKSHIQENWRI+DFFSHHPESLHMFSFL
Sbjct:   38 GPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDISHLTCADFLRAPGVQTPLIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGLKFPDMVHALKPNPKSHIQENWRILDFFSHHPESLHMFSFL 189          

HSP 2 Score: 69.707 bits (169), Expect = 7.780e-99
Identity = 28/37 (75.68%), Postives = 35/37 (94.59%), Query Frame = 3
Query:   90 MDPYKFRPASSFNAPFFTTNSGAPVWNNNSSMTIGPR 200
            MDPYK RP+S+FN+PF+TTNSGAP+WNNNSS+T+G R
Sbjct:    1 MDPYKNRPSSAFNSPFWTTNSGAPIWNNNSSLTVGSR 37          
BLAST of CN188196 vs. ExPASy Swiss-Prot
Match: CATA1_GOSHI (Catalase isozyme 1 OS=Gossypium hirsutum GN=CAT1 PE=2 SV=2)

HSP 1 Score: 308.916 bits (790), Expect = 7.780e-99
Identity = 145/152 (95.39%), Postives = 150/152 (98.68%), Query Frame = 2
Query:  218 GPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRIVDFFSHHPESLHMFSFL 673
            G  LLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHD+S+LTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFF+RDGMKFPDMVHALKPNPKSHIQENWRI+DFFSHHPESLHMF+FL
Sbjct:   38 GQYLLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDISHLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFIRDGMKFPDMVHALKPNPKSHIQENWRILDFFSHHPESLHMFTFL 189          

HSP 2 Score: 73.9442 bits (180), Expect = 7.780e-99
Identity = 30/37 (81.08%), Postives = 36/37 (97.30%), Query Frame = 3
Query:   90 MDPYKFRPASSFNAPFFTTNSGAPVWNNNSSMTIGPR 200
            MDPYK RP+S+FN+PF+TTNSGAPVWNNNSS+T+GPR
Sbjct:    1 MDPYKHRPSSAFNSPFWTTNSGAPVWNNNSSLTVGPR 37          
BLAST of CN188196 vs. ExPASy Swiss-Prot
Match: CATA_PHAAU (Catalase OS=Phaseolus aureus PE=2 SV=1)

HSP 1 Score: 308.916 bits (790), Expect = 5.005e-98
Identity = 147/152 (96.71%), Postives = 150/152 (98.68%), Query Frame = 2
Query:  218 GPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRIVDFFSHHPESLHMFSFL 673
            GPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDVS+LTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNN PVFFVRDGMKFPDMVHALKPNPK+HIQENWRI+DFFSH PESLHMFSFL
Sbjct:   38 GPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDVSHLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNLPVFFVRDGMKFPDMVHALKPNPKNHIQENWRILDFFSHFPESLHMFSFL 189          

HSP 2 Score: 71.2478 bits (173), Expect = 5.005e-98
Identity = 28/37 (75.68%), Postives = 36/37 (97.30%), Query Frame = 3
Query:   90 MDPYKFRPASSFNAPFFTTNSGAPVWNNNSSMTIGPR 200
            MDPYK+RP+S+FN+PF+TTNSGAPVWNNN+S+T+G R
Sbjct:    1 MDPYKYRPSSAFNSPFWTTNSGAPVWNNNNSLTVGTR 37          
BLAST of CN188196 vs. ExPASy Swiss-Prot
Match: CATA4_SOYBN (Catalase-4 OS=Glycine max GN=CAT4 PE=2 SV=1)

HSP 1 Score: 307.375 bits (786), Expect = 2.468e-97
Identity = 145/152 (95.39%), Postives = 150/152 (98.68%), Query Frame = 2
Query:  218 GPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRIVDFFSHHPESLHMFSFL 673
            GPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHD+S+LTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNN PVFFVRDGMKFPDMVHALKPNPK+HIQENWRI+DFFSH PESLHMF+FL
Sbjct:   38 GPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDISHLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNLPVFFVRDGMKFPDMVHALKPNPKNHIQENWRILDFFSHFPESLHMFTFL 189          

HSP 2 Score: 70.4774 bits (171), Expect = 2.468e-97
Identity = 28/37 (75.68%), Postives = 35/37 (94.59%), Query Frame = 3
Query:   90 MDPYKFRPASSFNAPFFTTNSGAPVWNNNSSMTIGPR 200
            MDPYK RP+S+FN+PF+TTNSGAP+WNNNSS+T+G R
Sbjct:    1 MDPYKHRPSSAFNSPFWTTNSGAPIWNNNSSLTVGAR 37          
BLAST of CN188196 vs. ExPASy Swiss-Prot
Match: CATA2_SOLLC (Catalase isozyme 2 OS=Solanum lycopersicum GN=CAT2 PE=2 SV=1)

HSP 1 Score: 308.916 bits (790), Expect = 7.148e-97
Identity = 143/152 (94.08%), Postives = 151/152 (99.34%), Query Frame = 2
Query:  218 GPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRIVDFFSHHPESLHMFSFL 673
            GP+LLEDYHLVEKLANFDRERI ERVVHARGASAKGFFEVTHD+++LTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFF+RDGMKFPDMVHALKPNPKSHIQENWR++DFFSHHPESLHMF+FL
Sbjct:   38 GPVLLEDYHLVEKLANFDRERIAERVVHARGASAKGFFEVTHDIAHLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFIRDGMKFPDMVHALKPNPKSHIQENWRVLDFFSHHPESLHMFTFL 189          

HSP 2 Score: 67.3958 bits (163), Expect = 7.148e-97
Identity = 28/37 (75.68%), Postives = 35/37 (94.59%), Query Frame = 3
Query:   90 MDPYKFRPASSFNAPFFTTNSGAPVWNNNSSMTIGPR 200
            MDPYK+RP+S+FN+PF TTNSGAPV+NNNSS+T+G R
Sbjct:    1 MDPYKYRPSSAFNSPFCTTNSGAPVFNNNSSLTVGAR 37          
The following BLAST results are available for this feature:
BLAST of CN188196 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 141
Match NameE-valueIdentityDescription
CATA2_ARATH7.730e-10296.71Catalase-2 OS=Arabidopsis thaliana GN=CAT2 PE=1 SV... [more]
CATA2_GOSHI1.578e-9996.05Catalase isozyme 2 OS=Gossypium hirsutum GN=CAT2 P... [more]
CATA3_NICPL2.686e-9997.37Catalase isozyme 3 OS=Nicotiana plumbaginifolia GN... [more]
CATA_SOLAP5.964e-9997.37Catalase OS=Soldanella alpina PE=2 SV=1[more]
CATA3_SOYBN7.780e-9996.71Catalase-3 OS=Glycine max GN=CAT3 PE=2 SV=1[more]
CATA1_SOYBN7.780e-9996.71Catalase-1/2 OS=Glycine max GN=CAT1 PE=2 SV=1[more]
CATA1_GOSHI7.780e-9995.39Catalase isozyme 1 OS=Gossypium hirsutum GN=CAT1 P... [more]
CATA_PHAAU5.005e-9896.71Catalase OS=Phaseolus aureus PE=2 SV=1[more]
CATA4_SOYBN2.468e-9795.39Catalase-4 OS=Glycine max GN=CAT4 PE=2 SV=1[more]
CATA2_SOLLC7.148e-9794.08Catalase isozyme 2 OS=Solanum lycopersicum GN=CAT2... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0005K11_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0005K11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188196 ID=CN188196; Name=CN188196; organism=Citrus sinensis; type=EST; length=673bp
GAGGACACAATCCCCATTTGTCTACTCTCTCTTTTTCTTTCTCGTAGTGT
AGCTTCTCGTTCAATCTTTTTTTCTGCTTCCCTCCCGCTATGGATCCATA
CAAGTTCCGCCCTGCCAGTTCTTTCAACGCCCCCTTCTTTACCACCAATT
CCGGCGCTCCGGTATGGAACAACAACTCATCAATGACGATTGGACCTAGA
GTTGCTTCAATTTGACAGGTCCAATCCTCCTTGAGGATTATCATCTAGTG
GAGAAACTTGCAAATTTTGATAGGGAGCGGATTCCAGAACGTGTTGTCCA
TGCCAGGGGAGCCAGTGCTAAGGGTTTCTTTGAGGTCACCCATGATGTTT
CTAACCTTACTTGTGCTGATTTCCTTCGAGCCCCAGGGGTTCAGACGCCT
GTCATTGTCCGCTTCTCCACTGTTATCCATGAGCGTGGCAGCCCTGAAAC
CCTGAGAGATCCTCGAGGATTTGCGGTCAAGTTTTACACCAGAGAGGGTA
ATTTTGATCTTGTGGGAAACAATTTCCCCGTCTTTTTTGTCCGTGATGGA
ATGAAATTCCCTGACATGGTCCATGCGCTTAAACCTAACCCAAAGTCTCA
CATCCAAGAGAACTGGAGGATTGTTGACTTCTTCTCCCATCATCCTGAAA
GCTTGCACATGTTCTCCTTCTTG
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