CN188173
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN188173 vs. ExPASy Swiss-Prot
Match: AHM7_ARATH (Putative copper-transporting ATPase 3 OS=Arabidopsis thaliana GN=HMA5 PE=2 SV=2) HSP 1 Score: 421.394 bits (1082), Expect = 2.247e-117 Identity = 211/230 (91.74%), Postives = 221/230 (96.09%), Query Frame = 3 Query: 3 SSDGYVLWGQSHVYESMITGEARPVAKRKGYTVIGGTVNENGVLHIKATRVGSESALAQIVRLVESAQMAKAPVQKFADRISKYFVPLVIILSFSTWLAWFLAGKFHSYPESWIPSSMDSFQLALQFGISVMVIACPCALGLATPTAVMVGTGVGASQGVLIKGGQALESAHKVNCIVFDKTGTLTVGKPVVVSTKLLKNMVLRDFYEVVAATEVNSEHPLAKAIVEYAK 692 +SDGYV+WGQSHV ESMITGEARPVAKRKG TVIGGT+NENGVLH+K TRVGSESALAQIVRLVESAQ+AKAPVQK ADRISK+FVPLVI LSFSTWLAWFLAGK H YPESWIPSSMDSF+LALQFGISVMVIACPCALGLATPTAVMVGTGVGASQGVLIKGGQALE AHKVNCIVFDKTGTLT+GKPVVV TKLLKNMVLR+FYE+VAATEVNSEHPLAKAIVEYAK Sbjct: 482 ASDGYVIWGQSHVNESMITGEARPVAKRKGDTVIGGTLNENGVLHVKVTRVGSESALAQIVRLVESAQLAKAPVQKLADRISKFFVPLVIFLSFSTWLAWFLAGKLHWYPESWIPSSMDSFELALQFGISVMVIACPCALGLATPTAVMVGTGVGASQGVLIKGGQALERAHKVNCIVFDKTGTLTMGKPVVVKTKLLKNMVLREFYELVAATEVNSEHPLAKAIVEYAK 711
BLAST of CN188173 vs. ExPASy Swiss-Prot
Match: AHM5_ARATH (Copper-transporting ATPase RAN1 OS=Arabidopsis thaliana GN=RAN1 PE=1 SV=1) HSP 1 Score: 276.174 bits (705), Expect = 1.167e-73 Identity = 134/229 (58.52%), Postives = 173/229 (75.55%), Query Frame = 3 Query: 6 SDGYVLWGQSHVYESMITGEARPVAKRKGYTVIGGTVNENGVLHIKATRVGSESALAQIVRLVESAQMAKAPVQKFADRISKYFVPLVIILSFSTWLAWFLAGKFHSYPESWIPSSMDSFQLALQFGISVMVIACPCALGLATPTAVMVGTGVGASQGVLIKGGQALESAHKVNCIVFDKTGTLTVGKPVVVSTKLLKNMVLRDFYEVVAATEVNSEHPLAKAIVEYAK 692 +DG V+WG S+V ESM+TGE+ PV+K VIGGT+N +G LH+KAT+VGS++ L+QI+ LVE+AQM+KAP+QKFAD ++ FVP+VI L+ T + W + G +YP+ W+P + F +L F ISV+VIACPCALGLATPTAVMV TGVGA+ GVLIKGG ALE AHKV ++FDKTGTLT GK V +TK+ M +F +VA+ E +SEHPLAKAIV YA+ Sbjct: 480 ADGVVVWGSSYVNESMVTGESVPVSKEVDSPVIGGTINMHGALHMKATKVGSDAVLSQIISLVETAQMSKAPIQKFADYVASIFVPVVITLALFTLVGWSIGGAVGAYPDEWLPENGTHFVFSLMFSISVVVIACPCALGLATPTAVMVATGVGATNGVLIKGGDALEKAHKVKYVIFDKTGTLTQGKATVTTTKVFSEMDRGEFLTLVASAEASSEHPLAKAIVAYAR 708
BLAST of CN188173 vs. ExPASy Swiss-Prot
Match: ATP7A_RAT (Copper-transporting ATPase 1 OS=Rattus norvegicus GN=Atp7a PE=1 SV=1) HSP 1 Score: 234.572 bits (597), Expect = 3.895e-61 Identity = 126/240 (52.50%), Postives = 166/240 (69.17%), Query Frame = 3 Query: 9 DGYVLWGQSHVYESMITGEARPVAKRKGYTVIGGTVNENGVLHIKATRVGSESALAQIVRLVESAQMAKAPVQKFADRISKYFVPLVIILSFSTWLAWFLAGKFHSYP--ESWIPSSMDS-------FQLALQFGISVMVIACPCALGLATPTAVMVGTGVGASQGVLIKGGQALESAHKVNCIVFDKTGTLTVGKPVVVSTKLL--KNMVLRD-FYEVVAATEVNSEHPLAKAIVEYAK 692 DG V+ G S V ES+ITGEA PVAK+ G TVI G++N+NG L I+AT VG+++ L+QIV+LVE AQ +KAP+Q+FAD++S YFVP ++++S T L W + G F ++ E++ P S + A Q I+V+ IACPC+LGLATPTAVMVGTGVGA G+LIKGG+ LE AHKV +VFDKTGT+T G PVV K+L N + R+ +V E NSEHPL A+ +Y K Sbjct: 851 DGRVIEGHSMVDESLITGEAMPVAKKPGSTVIAGSINQNGSLLIRATHVGADTTLSQIVKLVEEAQTSKAPIQQFADKLSGYFVPFIVLVSIVTLLVWIIIG-FQNFEIVEAYFPGYNRSISRTETIIRFAFQASITVLCIACPCSLGLATPTAVMVGTGVGAQNGILIKGGEPLEMAHKVKVVVFDKTGTITHGTPVVNQVKVLVESNKISRNKILAIVGTAESNSEHPLGAAVTKYCK 1089
BLAST of CN188173 vs. ExPASy Swiss-Prot
Match: ATP7A_MOUSE (Copper-transporting ATPase 1 OS=Mus musculus GN=Atp7a PE=1 SV=2) HSP 1 Score: 234.572 bits (597), Expect = 3.895e-61 Identity = 126/240 (52.50%), Postives = 166/240 (69.17%), Query Frame = 3 Query: 9 DGYVLWGQSHVYESMITGEARPVAKRKGYTVIGGTVNENGVLHIKATRVGSESALAQIVRLVESAQMAKAPVQKFADRISKYFVPLVIILSFSTWLAWFLAGKFHSYP--ESWIPSSMDS-------FQLALQFGISVMVIACPCALGLATPTAVMVGTGVGASQGVLIKGGQALESAHKVNCIVFDKTGTLTVGKPVVVSTKLL--KNMVLRD-FYEVVAATEVNSEHPLAKAIVEYAK 692 DG V+ G S V ES+ITGEA PVAK+ G TVI G++N+NG L I+AT VG+++ L+QIV+LVE AQ +KAP+Q+FAD++S YFVP ++++S T L W + G F ++ E++ P S + A Q I+V+ IACPC+LGLATPTAVMVGTGVGA G+LIKGG+ LE AHKV +VFDKTGT+T G PVV K+L N + R+ +V E NSEHPL A+ +Y K Sbjct: 850 DGRVIEGHSMVDESLITGEAMPVAKKPGSTVIAGSINQNGSLLIRATHVGADTTLSQIVKLVEEAQTSKAPIQQFADKLSGYFVPFIVLVSIVTLLVWIIIG-FQNFEIVETYFPGYNRSISRTETIIRFAFQASITVLCIACPCSLGLATPTAVMVGTGVGAQNGILIKGGEPLEMAHKVKVVVFDKTGTITHGTPVVNQVKVLVESNKISRNKILAIVGTAESNSEHPLGAAVTKYCK 1088
BLAST of CN188173 vs. ExPASy Swiss-Prot
Match: ATP7A_CRIGR (Copper-transporting ATPase 1 (Fragment) OS=Cricetulus griseus GN=ATP7A PE=2 SV=1) HSP 1 Score: 231.876 bits (590), Expect = 2.525e-60 Identity = 125/240 (52.08%), Postives = 164/240 (68.33%), Query Frame = 3 Query: 9 DGYVLWGQSHVYESMITGEARPVAKRKGYTVIGGTVNENGVLHIKATRVGSESALAQIVRLVESAQMAKAPVQKFADRISKYFVPLVIILSFSTWLAWFLAGKFHSYP--ESWIPSSMDS-------FQLALQFGISVMVIACPCALGLATPTAVMVGTGVGASQGVLIKGGQALESAHKVNCIVFDKTGTLTVGKPVVVSTKLL--KNMVLRD-FYEVVAATEVNSEHPLAKAIVEYAK 692 DG V+ G S V ES+ITGEA PVAK+ G TVI G++N+NG L I AT VG+++ L+QIV+LVE AQ +KAP+Q+FAD++ YFVP ++++S +T L W + G F ++ E++ P S + A Q I+V+ IACPC+LGLATPTAVMVGTGVGA G+LIKGG+ LE AHKV +VFDKTGT+T G PVV K+L N + R +V E NSEHPL A+ +Y K Sbjct: 849 DGRVIEGHSMVDESLITGEAMPVAKKPGSTVIAGSINQNGSLLICATHVGADTTLSQIVKLVEEAQTSKAPIQQFADKLGGYFVPFIVLVSIATLLVWIIIG-FQNFTIVETYFPGYSRSISRTETIIRFAFQASITVLCIACPCSLGLATPTAVMVGTGVGAQNGILIKGGEPLEMAHKVKVVVFDKTGTITHGTPVVNQVKVLVESNKIPRSKILAIVGTAESNSEHPLGAAVTKYCK 1087
BLAST of CN188173 vs. ExPASy Swiss-Prot
Match: ATP7A_HUMAN (Copper-transporting ATPase 1 OS=Homo sapiens GN=ATP7A PE=1 SV=3) HSP 1 Score: 230.335 bits (586), Expect = 7.346e-60 Identity = 124/239 (51.88%), Postives = 160/239 (66.95%), Query Frame = 3 Query: 9 DGYVLWGQSHVYESMITGEARPVAKRKGYTVIGGTVNENGVLHIKATRVGSESALAQIVRLVESAQMAKAPVQKFADRISKYFVPLVIILSFSTWLAWFLAGKFH-SYPESWIPSSMDS-------FQLALQFGISVMVIACPCALGLATPTAVMVGTGVGASQGVLIKGGQALESAHKVNCIVFDKTGTLTVGKPVVVSTKLL---KNMVLRDFYEVVAATEVNSEHPLAKAIVEYAK 692 DG V+ G S V ES+ITGEA PVAK+ G TVI G++N+NG L I AT VG+++ L+QIV+LVE AQ +KAP+Q+FAD++S YFVP ++ +S +T L W + G + E++ P S + A Q I+V+ IACPC+LGLATPTAVMVGTGVGA G+LIKGG+ LE AHKV +VFDKTGT+T G PVV K+L + +V E NSEHPL AI +Y K Sbjct: 859 DGRVIEGHSMVDESLITGEAMPVAKKPGSTVIAGSINQNGSLLICATHVGADTTLSQIVKLVEEAQTSKAPIQQFADKLSGYFVPFIVFVSIATLLVWIVIGFLNFEIVETYFPGYNRSISRTETIIRFAFQASITVLCIACPCSLGLATPTAVMVGTGVGAQNGILIKGGEPLEMAHKVKVVVFDKTGTITHGTPVVNQVKVLTESNRISHHKILAIVGTAESNSEHPLGTAITKYCK 1097
BLAST of CN188173 vs. ExPASy Swiss-Prot
Match: ATP7B_HUMAN (Copper-transporting ATPase 2 OS=Homo sapiens GN=ATP7B PE=1 SV=4) HSP 1 Score: 224.172 bits (570), Expect = 5.264e-58 Identity = 120/239 (50.21%), Postives = 157/239 (65.69%), Query Frame = 3 Query: 9 DGYVLWGQSHVYESMITGEARPVAKRKGYTVIGGTVNENGVLHIKATRVGSESALAQIVRLVESAQMAKAPVQKFADRISKYFVPLVIILSFSTWLAWFLAG--------KFHSYPESWIPSSMDSFQLALQFGISVMVIACPCALGLATPTAVMVGTGVGASQGVLIKGGQALESAHKVNCIVFDKTGTLTVGKPVVVSTKLLKNMV---LRDFYEVVAATEVNSEHPLAKAIVEYAK 692 DG VL G + ES+ITGEA PV K+ G TVI G++N +G + IKAT VG+++ LAQIV+LVE AQM+KAP+Q+ ADR S YFVP +II+S T + W + G ++ P I + + A Q I+V+ IACPC+LGLATPTAVMVGTGV A G+LIKGG+ LE AHK+ ++FDKTGT+T G P V+ LL ++ LR VV E +SEHPL A+ +Y K Sbjct: 842 DGKVLEGNTMADESLITGEAMPVTKKPGSTVIAGSINAHGSVLIKATHVGNDTTLAQIVKLVEEAQMSKAPIQQLADRFSGYFVPFIIIMSTLTLVVWIVIGFIDFGVVQRYFPNPNKHISQTEVIIRFAFQTSITVLCIACPCSLGLATPTAVMVGTGVAAQNGILIKGGKPLEMAHKIKTVMFDKTGTITHGVPRVMRVLLLGDVATLPLRKVLAVVGTAEASSEHPLGVAVTKYCK 1080
BLAST of CN188173 vs. ExPASy Swiss-Prot
Match: ATP7B_RAT (Copper-transporting ATPase 2 OS=Rattus norvegicus GN=Atp7b PE=2 SV=1) HSP 1 Score: 223.016 bits (567), Expect = 1.173e-57 Identity = 121/239 (50.63%), Postives = 156/239 (65.27%), Query Frame = 3 Query: 9 DGYVLWGQSHVYESMITGEARPVAKRKGYTVIGGTVNENGVLHIKATRVGSESALAQIVRLVESAQMAKAPVQKFADRISKYFVPLVIILSFSTWLAWFLAG--------KFHSYPESWIPSSMDSFQLALQFGISVMVIACPCALGLATPTAVMVGTGVGASQGVLIKGGQALESAHKVNCIVFDKTGTLTVGKPVVVSTKLLKNMV---LRDFYEVVAATEVNSEHPLAKAIVEYAK 692 DG VL G + ES+ITGEA PV K+ G VI G++N +G + IKAT VG+++ LAQIV+LVE AQM+KAP+Q+ ADR S YFVP +II+S T + W + G K+ P I + + A Q I+V+ IACPC+LGLATPTAVMVGTGV A GVLIKGG+ LE AHK+ ++FDKTGT+T G P V+ LL ++ LR VV E +SEHPL A+ +Y K Sbjct: 835 DGKVLEGNTMADESLITGEAMPVTKKPGSIVIAGSINAHGSVLIKATHVGNDTTLAQIVKLVEEAQMSKAPIQQLADRFSGYFVPFIIIISTLTLVVWIIIGFVDFGIVQKYFPSPSKHISQTEVIIRFAFQTSITVLCIACPCSLGLATPTAVMVGTGVAAQNGVLIKGGKPLEMAHKIKTVMFDKTGTITHGVPRVMRFLLLVDVATLSLRKVLAVVGTAEASSEHPLGVAVTKYCK 1073
BLAST of CN188173 vs. ExPASy Swiss-Prot
Match: ATP7B_MOUSE (Copper-transporting ATPase 2 OS=Mus musculus GN=Atp7b PE=1 SV=1) HSP 1 Score: 222.246 bits (565), Expect = 2.000e-57 Identity = 120/239 (50.21%), Postives = 156/239 (65.27%), Query Frame = 3 Query: 9 DGYVLWGQSHVYESMITGEARPVAKRKGYTVIGGTVNENGVLHIKATRVGSESALAQIVRLVESAQMAKAPVQKFADRISKYFVPLVIILSFSTWLAWFLAG--------KFHSYPESWIPSSMDSFQLALQFGISVMVIACPCALGLATPTAVMVGTGVGASQGVLIKGGQALESAHKVNCIVFDKTGTLTVGKPVVVSTKLLKNMV---LRDFYEVVAATEVNSEHPLAKAIVEYAK 692 DG VL G + ES+ITGEA PV K+ G VI G++N +G + +KAT VG+++ LAQIV+LVE AQM+KAP+Q+ ADR S YFVP +II+S T + W + G K+ P I + + A Q I+V+ IACPC+LGLATPTAVMVGTGV A GVLIKGG+ LE AHK+ ++FDKTGT+T G P V+ LL ++ LR VV E +SEHPL A+ +Y K Sbjct: 844 DGKVLEGNTMADESLITGEAMPVTKKPGSIVIAGSINAHGSVLLKATHVGNDTTLAQIVKLVEEAQMSKAPIQQLADRFSGYFVPFIIIISTLTLVVWIVIGFVDFGVVQKYFPSPSKHISQTEVIIRFAFQTSITVLCIACPCSLGLATPTAVMVGTGVAAQNGVLIKGGKPLEMAHKIKTVMFDKTGTITHGVPRVMRFLLLADVATLPLRKVLAVVGTAEASSEHPLGVAVTKYCK 1082
BLAST of CN188173 vs. ExPASy Swiss-Prot
Match: ATP7B_SHEEP (Copper-transporting ATPase 2 OS=Ovis aries GN=ATP7B PE=2 SV=1) HSP 1 Score: 219.164 bits (557), Expect = 1.693e-56 Identity = 119/239 (49.79%), Postives = 153/239 (64.02%), Query Frame = 3 Query: 9 DGYVLWGQSHVYESMITGEARPVAKRKGYTVIGGTVNENGVLHIKATRVGSESALAQIVRLVESAQMAKAPVQKFADRISKYFVPLVIILSFSTWLAWFLAG--------KFHSYPESWIPSSMDSFQLALQFGISVMVIACPCALGLATPTAVMVGTGVGASQGVLIKGGQALESAHKVNCIVFDKTGTLTVGKPVVVSTKLLKNMV---LRDFYEVVAATEVNSEHPLAKAIVEYAK 692 DG VL G + ES+ITGEA PV K+ G VI G++N +G + I AT VG+++ LAQIV+LVE AQM+KAP+Q+ ADR S YFVP +II+S T + W + G K+ P I + + A Q I+V+ IACPC+LGLATPTAVMVGTGV A G+LIKGG+ LE AHK+ ++FDKTGT+T G P V LL ++ LR VV E +SEHPL A+ Y K Sbjct: 882 DGKVLEGNTMADESLITGEAMPVTKKPGSMVIAGSMNAHGSVLITATHVGNDTTLAQIVKLVEEAQMSKAPIQQLADRFSGYFVPFIIIISTVTLVVWIVIGFIDFGVVQKYFPAPSKGISQAEVVLRFAFQTSITVLCIACPCSLGLATPTAVMVGTGVAAQNGILIKGGKPLEMAHKIKTVMFDKTGTITHGVPKVSRVLLLVDLATLPLRKVLAVVGTAEASSEHPLGVAVTRYCK 1120 The following BLAST results are available for this feature:
BLAST of CN188173 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 153
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188173 ID=CN188173; Name=CN188173; organism=Citrus sinensis; type=EST; length=694bpback to top |