CN188172
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN188172 vs. ExPASy Swiss-Prot
Match: AHM7_ARATH (Putative copper-transporting ATPase 3 OS=Arabidopsis thaliana GN=HMA5 PE=2 SV=2) HSP 1 Score: 190.274 bits (482), Expect = 6.171e-48 Identity = 99/117 (84.62%), Postives = 103/117 (88.03%), Query Frame = -1 Query: 238 LVAADVGMAIGAGTDIAIEAADIVLMKSNLEDVITAIDLSRKTFSRIRLNYIWALGYNLLGIPIAAGALFPTTGFRLPPWIAGAAMAAXXXXXXXXXXXLKNYKRPKKLNNLEIREI 588 LVAADVGMAIGAGTDIAIEAADIVLMKSNLEDVITAIDLSRKTFSRIRLNY+WALGYNL+GIPIAAG LFP T FRLPPWIAGAAMAA LKNYKRPKKL++LEIREI Sbjct: 874 LVAADVGMAIGAGTDIAIEAADIVLMKSNLEDVITAIDLSRKTFSRIRLNYVWALGYNLMGIPIAAGVLFPGTRFRLPPWIAGAAMAASSVSVVCCSLLLKNYKRPKKLDHLEIREI 990
BLAST of CN188172 vs. ExPASy Swiss-Prot
Match: AHM5_ARATH (Copper-transporting ATPase RAN1 OS=Arabidopsis thaliana GN=RAN1 PE=1 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 3.635e-32 Identity = 70/114 (61.40%), Postives = 84/114 (73.68%), Query Frame = -1 Query: 247 LVAADVGMAIGAGTDIAIEAADIVLMKSNLEDVITAIDLSRKTFSRIRLNYIWALGYNLLGIPIAAGALFPTTGFRLPPWIAGAAMAAXXXXXXXXXXXLKNYKRPKKLNNLEI 588 L AADVGMAIGAGTD+AIEAAD VLM++NLEDVITAIDLSRKT +RIRLNY++A+ YN++ IPIAAG FP +LPPW AGA MA L+ YK+P+ L+I Sbjct: 885 LAAADVGMAIGAGTDVAIEAADYVLMRNNLEDVITAIDLSRKTLTRIRLNYVFAMAYNVVSIPIAAGVFFPVLRVQLPPWAAGACMALSSVSVVCSSLLLRRYKKPRLTTVLKI 998
BLAST of CN188172 vs. ExPASy Swiss-Prot
Match: ATP7A_RAT (Copper-transporting ATPase 1 OS=Rattus norvegicus GN=Atp7a PE=1 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 1.252e-24 Identity = 61/115 (53.04%), Postives = 80/115 (69.57%), Query Frame = -1 Query: 244 LVAADVGMAIGAGTDIAIEAADIVLMKSNLEDVITAIDLSRKTFSRIRLNYIWALGYNLLGIPIAAGALFPTTGFRLPPWIAGAAMAAXXXXXXXXXXXLKNYKRPKKLNNLEIR 588 L A VG+AIG GTD+AIEAAD+VL++++L DV+ +IDLSRKT RIR+N+++AL YNL+GIPIAAG P G L PW+ AAMAA LK Y++P +N E+R Sbjct: 1301 LAMASVGIAIGTGTDVAIEAADVVLIRNDLLDVVASIDLSRKTVKRIRINFVFALIYNLIGIPIAAGVFLP-IGLVLQPWMGSAAMAASSVSVVLSSLFLKLYRKP-TYDNYELR 1413
BLAST of CN188172 vs. ExPASy Swiss-Prot
Match: ATP7A_MOUSE (Copper-transporting ATPase 1 OS=Mus musculus GN=Atp7a PE=1 SV=2) HSP 1 Score: 111.309 bits (277), Expect = 3.643e-24 Identity = 58/106 (54.72%), Postives = 76/106 (71.70%), Query Frame = -1 Query: 271 LVAADVGMAIGAGTDIAIEAADIVLMKSNLEDVITAIDLSRKTFSRIRLNYIWALGYNLLGIPIAAGALFPTTGFRLPPWIAGAAMAAXXXXXXXXXXXLKNYKRP 588 L A+VG+AIG GTD+AIEAAD+VL++++L DV+ +IDLSRKT RIR+N+++AL YNL+GIPIAAG P G L PW+ AAMAA LK Y++P Sbjct: 1300 LAMANVGIAIGTGTDVAIEAADVVLIRNDLLDVVASIDLSRKTVKRIRINFVFALIYNLVGIPIAAGVFLP-IGLVLQPWMGSAAMAASSVSVVLSSLFLKLYRKP 1404
BLAST of CN188172 vs. ExPASy Swiss-Prot
Match: ATP7A_HUMAN (Copper-transporting ATPase 1 OS=Homo sapiens GN=ATP7A PE=1 SV=3) HSP 1 Score: 109.768 bits (273), Expect = 1.060e-23 Identity = 57/106 (53.77%), Postives = 76/106 (71.70%), Query Frame = -1 Query: 271 LVAADVGMAIGAGTDIAIEAADIVLMKSNLEDVITAIDLSRKTFSRIRLNYIWALGYNLLGIPIAAGALFPTTGFRLPPWIAGAAMAAXXXXXXXXXXXLKNYKRP 588 L A+VG+AIG GTD+AIEAAD+VL++++L DV+ +IDLSR+T RIR+N+++AL YNL+GIPIAAG P G L PW+ AAMAA LK Y++P Sbjct: 1309 LAMANVGIAIGTGTDVAIEAADVVLIRNDLLDVVASIDLSRETVKRIRINFVFALIYNLVGIPIAAGVFMP-IGLVLQPWMGSAAMAASSVSVVLSSLFLKLYRKP 1413
BLAST of CN188172 vs. ExPASy Swiss-Prot
Match: ATP7B_SHEEP (Copper-transporting ATPase 2 OS=Ovis aries GN=ATP7B PE=2 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 1.531e-22 Identity = 57/106 (53.77%), Postives = 73/106 (68.87%), Query Frame = -1 Query: 271 LVAADVGMAIGAGTDIAIEAADIVLMKSNLEDVITAIDLSRKTFSRIRLNYIWALGYNLLGIPIAAGALFPTTGFRLPPWIAGAAMAAXXXXXXXXXXXLKNYKRP 588 L ADVG+AIG GTD+AIEAAD+VL++++L DV+ +I LSR+T RIRLN + AL YNL+GIP+AAG P G L PW+ AAMAA LK Y++P Sbjct: 1315 LAQADVGIAIGTGTDVAIEAADVVLIRNDLLDVVASIHLSRRTVWRIRLNLVLALIYNLIGIPVAAGVFIP-IGVVLQPWMGSAAMAASSVSVVLSSLQLKCYRKP 1419
BLAST of CN188172 vs. ExPASy Swiss-Prot
Match: ATP7A_CRIGR (Copper-transporting ATPase 1 (Fragment) OS=Cricetulus griseus GN=ATP7A PE=2 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 1.531e-22 Identity = 57/115 (49.57%), Postives = 77/115 (66.96%), Query Frame = -1 Query: 244 LVAADVGMAIGAGTDIAIEAADIVLMKSNLEDVITAIDLSRKTFSRIRLNYIWALGYNLLGIPIAAGALFPTTGFRLPPWIAGAAMAAXXXXXXXXXXXLKNYKRPKKLNNLEIR 588 L A+VG+AIG GTD+ IEAAD+V ++++L DV+ +IDLSRKT RIR+N+++ L YNL+GIPIAAG P G PW+ AAMAA LK Y++P +N E+R Sbjct: 1299 LAMANVGIAIGTGTDVTIEAADVVFIRNDLLDVVASIDLSRKTVKRIRINFLFPLIYNLVGIPIAAGVFLP-IGLVFQPWMGSAAMAASSVSVVLSSLFLKLYRKP-TYDNYELR 1411
BLAST of CN188172 vs. ExPASy Swiss-Prot
Match: ATP7B_HUMAN (Copper-transporting ATPase 2 OS=Homo sapiens GN=ATP7B PE=1 SV=4) HSP 1 Score: 105.145 bits (261), Expect = 2.611e-22 Identity = 56/106 (52.83%), Postives = 73/106 (68.87%), Query Frame = -1 Query: 271 LVAADVGMAIGAGTDIAIEAADIVLMKSNLEDVITAIDLSRKTFSRIRLNYIWALGYNLLGIPIAAGALFPTTGFRLPPWIAGAAMAAXXXXXXXXXXXLKNYKRP 588 L AD+G+AIG GTD+AIEAAD+VL++++L DV+ +I LS++T RIR+N + AL YNL+GIPIAAG P G L PW+ AAMAA LK YK+P Sbjct: 1275 LAQADMGVAIGTGTDVAIEAADVVLIRNDLLDVVASIHLSKRTVRRIRINLVLALIYNLVGIPIAAGVFMP-IGIVLQPWMGSAAMAASSVSVVLSSLQLKCYKKP 1379
BLAST of CN188172 vs. ExPASy Swiss-Prot
Match: ATP7B_MOUSE (Copper-transporting ATPase 2 OS=Mus musculus GN=Atp7b PE=1 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 5.816e-22 Identity = 55/106 (51.89%), Postives = 73/106 (68.87%), Query Frame = -1 Query: 271 LVAADVGMAIGAGTDIAIEAADIVLMKSNLEDVITAIDLSRKTFSRIRLNYIWALGYNLLGIPIAAGALFPTTGFRLPPWIAGAAMAAXXXXXXXXXXXLKNYKRP 588 L ADVG+AIG GTD+AIEAAD+VL++++L DV+ +I LS++T RIR+N + AL YN++GIPIAAG P G L PW+ AAMAA LK Y++P Sbjct: 1272 LAQADVGIAIGTGTDVAIEAADVVLIRNDLLDVVASIHLSKRTVRRIRVNLVLALIYNMVGIPIAAGVFMP-IGIVLQPWMGSAAMAASSVSVVLSSLQLKCYRKP 1376
BLAST of CN188172 vs. ExPASy Swiss-Prot
Match: COPA_ARCFU (Probable copper-exporting P-type ATPase A OS=Archaeoglobus fulgidus GN=copA PE=1 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.433e-20 Identity = 53/127 (41.73%), Postives = 76/127 (59.84%), Query Frame = -1 Query: 208 LVAADVGMAIGAGTDIAIEAADIVLMKSNLEDVITAIDLSRKTFSRIRLNYIWALGYNLLGIPIAAGALFPTTGFRLPPWIAGAAMAAXXXXXXXXXXXLKNYKRPKKLNNLEIREICWKNSKSICY 588 L AD+G+A+G+G+D+A+E+ DIVL++ +L DV+ AI LSRKT S+I+ N WAL YN++ IP AAG L+P G P AG AMA L+NY P + + +I + S C+ Sbjct: 626 LAQADLGIAVGSGSDVAVESGDIVLIRDDLRDVVAAIQLSRKTMSKIKQNIFWALIYNVILIPAAAGLLYPIFGVVFRPEFAGLAMAMSSVSVVANSLLLRNYVPPIRRGGDSVEKIVLELSGLSCH 752 The following BLAST results are available for this feature:
BLAST of CN188172 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 69
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188172 ID=CN188172; Name=CN188172; organism=Citrus sinensis; type=EST; length=588bpback to top |