CN188154

Overview
NameCN188154
Unique NameCN188154
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length679
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8707 contig Csv1_Contig8707:233..911. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN188154 vs. ExPASy Swiss-Prot
Match: PME31_ARATH (Pectinesterase 31 OS=Arabidopsis thaliana GN=PME31 PE=1 SV=1)

HSP 1 Score: 317.005 bits (811), Expect = 5.763e-86
Identity = 138/174 (79.31%), Postives = 156/174 (89.66%), Query Frame = -2
Query:  157 DTLYLHYEKQYLKDCYIEGSVDFIFGNSTALIEHCHIHCKSQGFITAQSRKSSQETTGYVFLRCVITGNGGTGYIYLGRPWGPFGRVVFAFTYMDQCIRHVGWHNWGKVENERSACFYEYRCFGPGSCPAKRETWARELLDEEAEQFLMHNFIDPDPQRPWLAQRMALRIPYSA 678
            DTLYLH+ KQYLKDCYIEGSVDFIFGNSTAL+EHCHIHCKSQGFITAQSRKSSQE+TGYVFLRCVITGNG +GY+YLGRPWGPFGRVV A+TYMD CIR+VGWHNWG  ENERSACFYEYRCFGPGSC ++R  W+REL+D+EA  F+ H+F+DP+  RPWL  RM ++ PYSA
Sbjct:  144 DTLYLHHGKQYLKDCYIEGSVDFIFGNSTALLEHCHIHCKSQGFITAQSRKSSQESTGYVFLRCVITGNGQSGYMYLGRPWGPFGRVVLAYTYMDACIRNVGWHNWGNAENERSACFYEYRCFGPGSCSSERVPWSRELMDDEAGHFVHHSFVDPEQDRPWLCLRMGVKTPYSA 317          
BLAST of CN188154 vs. ExPASy Swiss-Prot
Match: PME53_ARATH (Probable pectinesterase 53 OS=Arabidopsis thaliana GN=PME53 PE=2 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 1.029e-42
Identity = 84/156 (53.85%), Postives = 103/156 (66.03%), Query Frame = -2
Query:  217 DTLYLHYEKQYLKDCYIEGSVDFIFGNSTALIEHCHIHCKSQ--GFITAQSRKSSQETTGYVFLRCVITGNGGTGYIYLGRPWGPFGRVVFAFTYMDQCIRHVGWHNWGKVENERSACFYEYRCFGPGSCPAKRETWARELLDEEAEQFLMHNFID 678
            DTLY H  + Y KDCYIEGSVDFIFGN+ +L E CH+H  +   G +TAQ R S  E TG+ F++C +TG   TG +YLGR WGPF RVVFA+TYMD  I   GW+NWG    E +  + +Y+C G G+    R  WAREL DEEA+ FL   FID
Sbjct:  224 DTLYDHLGRHYYKDCYIEGSVDFIFGNALSLYEGCHVHAIADKLGAVTAQGRSSVLEDTGFSFVKCKVTG---TGVLYLGRAWGPFSRVVFAYTYMDNIILPRGWYNWGDPSREMTVFYGQYKCTGAGANYGGRVAWARELTDEEAKPFLSLTFID 376          
BLAST of CN188154 vs. ExPASy Swiss-Prot
Match: PME11_ARATH (Putative pectinesterase 11 OS=Arabidopsis thaliana GN=PME11 PE=2 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 1.032e-34
Identity = 69/155 (44.52%), Postives = 98/155 (63.23%), Query Frame = -2
Query:  220 DTLYLHYEKQYLKDCYIEGSVDFIFGNSTALIEHCHIHCKS--QGFITAQSRKSSQETTGYVFLRCVITGNGGTGYIYLGRPWGPFGRVVFAFTYMDQCIRHVGWHNWGKVENERSACFYEYRCFGPGSCPAKRETWARELLDEEAEQFLMHNFI 678
            DTL       Y K+CYIEG+ DFI G++++L E CH+H  S   G ITAQ R S+ E +G+ FL C +TG+G T   +LGRPWG + RVVFA+++    +   GW+ WG    E +  + EY+C+GPG+   +R  W+++L DEEA  FL  +FI
Sbjct:  175 DTLLDDNGNHYFKNCYIEGATDFICGSASSLYERCHLHSLSPNNGSITAQMRTSATEKSGFTFLGCKLTGSGST---FLGRPWGAYSRVVFAYSFFSNVVAPQGWNQWGDSTKENTVYYGEYKCYGPGADREQRVEWSKQLSDEEATVFLSKDFI 326          
BLAST of CN188154 vs. ExPASy Swiss-Prot
Match: PME68_ARATH (Probable pectinesterase 68 OS=Arabidopsis thaliana GN=PME68 PE=2 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 1.542e-30
Identity = 67/170 (39.41%), Postives = 99/170 (58.24%), Query Frame = -2
Query:  178 DTLYLHYEKQYLKDCYIEGSVDFIFGNSTALIEHCHIHCKSQGF--ITAQSRKSSQETTGYVFLRCVITGNGGTGYIYLGRPWGPFGRVVFAFTYMDQCIRHVGWHNWGKVENE-RSACFYEYRCFGPGSCPAKRETWARELLDEEAEQFLMHNFIDPDPQRPWLAQRMA 678
            DTL     + Y K+CYIEGS+DFIFGN  ++ + C +H  +  F  I A  R   +E TG+ F+ C +TG   TG +Y+GR  G + R+V+A+TY D  + H GW +W    N+ ++A F  Y C+GPG+   +  +WAR L  E A  F+  +F++    R W+A R A
Sbjct:  199 DTLCDDAGRHYFKECYIEGSIDFIFGNGRSMYKDCELHSIASRFGSIAAHGRTCPEEKTGFAFVGCRVTG---TGPLYVGRAMGQYSRIVYAYTYFDALVAHGGWDDWDHKSNKSKTAFFGVYNCYGPGAAATRGVSWARALDYESAHPFIAKSFVN---GRHWIAPRDA 362          
BLAST of CN188154 vs. ExPASy Swiss-Prot
Match: PME67_ARATH (Probable pectinesterase 67 OS=Arabidopsis thaliana GN=PME67 PE=2 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 5.858e-30
Identity = 68/172 (39.53%), Postives = 101/172 (58.72%), Query Frame = -2
Query:  184 DTLYLHYEKQYLKDCYIEGSVDFIFGNSTALIEHCHI------HCKSQGFITAQSRKSSQETTGYVFLRCVITGNGGTGYIYLGRPWGPFGRVVFAFTYMDQCIRHVGWHNWGKVENERSACFYEYRCFGPGSCPAKRETWARELLDEEAEQFLMHNFIDPDPQRP-WLAQR 678
            +TL+ +  + Y  +CYI+GS+DFIFG +T++  +C I        K  G ITA  R+S++E TGYVF+R  + G      +YLGR  GP+ RV+FA TY+ + +   GW NW    + ++    EY+C GPG+   KR  WA++L  +E E FL  +FID     P WL ++
Sbjct:  175 NTLFDNKGRHYYHECYIQGSIDFIFGRATSIFNNCEIFVISDKRVKPYGSITAHHRESAEEKTGYVFIRGKVYG---IDEVYLGRAKGPYSRVIFAKTYLSKTVVPDGWTNWSYHGSTQNLYHGEYKCHGPGAERQKRSDWAKDLTKQEVESFLSIDFIDGTSWLPVWLQEK 343          
BLAST of CN188154 vs. ExPASy Swiss-Prot
Match: PME15_ARATH (Probable pectinesterase 15 OS=Arabidopsis thaliana GN=PME15 PE=2 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 9.992e-30
Identity = 66/163 (40.49%), Postives = 97/163 (59.51%), Query Frame = -2
Query:  211 DTLYLHYEKQYLKDCYIEGSVDFIFGNSTALIEHCHIHCKSQG-------FITAQSRKSSQETTGYVFLRCVITGNGGTGYIYLGRPWGPFGRVVFAFTYMDQCIRHVGWHNWGKVENERSACFYEYRCFGPGSCPAKRETWARELLDEEAEQFLMHNFIDPD 678
            DTL     + + K+C+I+GS+DFIFGN  +L + C I+  ++G        ITAQ R+S  E +G+ F+ C I G+G    I LGR WG +  VVF+ TYM   I   GW+NWG    E++  F E++C+GPG+   +R  + ++L D EA  F+  +FID D
Sbjct:  223 DTLLDDKGRHFFKECFIQGSIDFIFGNGRSLYQDCTINSIAKGNTSGVTGSITAQGRQSEDEQSGFSFVNCKIDGSGE---ILLGRAWGAYATVVFSNTYMSGIITPEGWNNWGDSTKEKTVTFGEHKCYGPGADYKERVLFGKQLTDSEASSFIDVSFIDGD 382          
BLAST of CN188154 vs. ExPASy Swiss-Prot
Match: PME14_ARATH (Putative pectinesterase 14 OS=Arabidopsis thaliana GN=PME14 PE=2 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 1.704e-29
Identity = 64/158 (40.51%), Postives = 99/158 (62.66%), Query Frame = -2
Query:  217 DTLYLHYEKQYLKDCYIEGSVDFIFGNSTALIEHCHIHCKSQ----GFITAQSRKSSQETTGYVFLRCVITGNGGTGYIYLGRPWGPFGRVVFAFTYMDQCIRHVGWHNWGKVENERSACFYEYRCFGPGSCPAKRETWARELLDEEAEQFLMHNFID 678
            DTL     + + K C+IEGS+DFIFGN  +L E C +H  ++    G ITA  + + ++ TG+VF+ C ITG+     ++LGR W P+ RV+F+ TYM + +   GW++ G  + +R+  + E+RC+GPG+  +KR T+A+ L D EA  F   +FID
Sbjct:  174 DTLLDQEGRHFFKGCFIEGSIDFIFGNGRSLYEDCTLHSIAKENTIGCITANGKDTLKDRTGFVFVNCKITGSAR---VWLGRAWRPYARVIFSKTYMSRVVSLDGWNDMGDPKTQRTVYYGEHRCYGPGANHSKRVTYAKLLSDVEAAPFTNISFID 328          
BLAST of CN188154 vs. ExPASy Swiss-Prot
Match: PME8_ARATH (Probable pectinesterase 8 OS=Arabidopsis thaliana GN=PME8 PE=2 SV=2)

HSP 1 Score: 122.865 bits (307), Expect = 1.595e-27
Identity = 62/166 (37.35%), Postives = 92/166 (55.42%), Query Frame = -2
Query:  211 DTLYLHYEKQYLKDCYIEGSVDFIFGNSTALIEHCHIHCKSQ----------GFITAQSRKSSQETTGYVFLRCVITGNGGTGYIYLGRPWGPFGRVVFAFTYMDQCIRHVGWHNWGKVENERSACFYEYRCFGPGSCPAKRETWARELLDEEAEQFLMHNFIDPD 678
            DTL+    + Y KDCYI+GS+DFIFGN+ +L + C I   +           G +TA  R S  E +G+ F+ C I   GGTG+++LGR W P+ RVVF  T M   I   GW+N+     + +  + EY C GPG+  +KR  + ++L + +    +  +FID D
Sbjct:  223 DTLHDDRGRHYFKDCYIQGSIDFIFGNAKSLYQDCRIISMANQLSPGSKAVNGAVTANGRSSKDENSGFSFVNCTI---GGTGHVWLGRAWRPYSRVVFVSTTMTDVIAPEGWNNFNDPSRDATIFYGEYNCSGPGADMSKRAPYVQKLNETQVALLINTSFIDGD 385          
BLAST of CN188154 vs. ExPASy Swiss-Prot
Match: PME62_ARATH (Pectinesterase QRT1 OS=Arabidopsis thaliana GN=QRT1 PE=2 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 1.595e-27
Identity = 65/158 (41.14%), Postives = 86/158 (54.43%), Query Frame = -2
Query:  211 DTLYLHYEKQYLKDCYIEGSVDFIFGNSTALIEHCHIH--CKSQGFITAQSRKSSQETTGYVFLRCVITGNGGTGYIYLGRPWGPFGRVVFAFTYMDQCIRHVGWHNWGKVENERSACFYEYRCFGPGSCPAKRETWARELLDEEAEQFLMHNFIDPD 678
            DTL+      Y   CYI+G+VDFIFGN+ +L + C IH   K  G I A  R S  E TG+ F+ C I+G   TG IYLGR WG + R V++  ++   I  VGW +W   E +R   F EY C G G+    R  W++ L  +E + FL   FI  D
Sbjct:  221 DTLFDDNGSHYFYQCYIQGNVDFIFGNAKSLYQDCDIHSTAKRYGAIAAHHRDSETEDTGFSFVNCDISG---TGQIYLGRAWGNYSRTVYSNCFIADIITPVGWSDWKHPERQRKVMFGEYNCRGRGAERGGRVPWSKTLTRDEVKPFLGREFIYGD 375          
BLAST of CN188154 vs. ExPASy Swiss-Prot
Match: PME52_ARATH (Putative pectinesterase 52 OS=Arabidopsis thaliana GN=PME52 PE=2 SV=2)

HSP 1 Score: 115.931 bits (289), Expect = 1.950e-25
Identity = 62/165 (37.58%), Postives = 94/165 (56.97%), Query Frame = -2
Query:  211 DTLYLHYEKQYLKDCYIEGSVDFIFGNSTALIEHCHIHCK--------SQGFITAQSRKSSQETTGYVFLRCVITGNGGTGYIYLGRPWGPFGRVVFAFTYMDQCIRHVGWHNWGKVENERSACFYEYRCFGPGSCPAKRETWARELLD-EEAEQFLMHNFIDPD 678
            DT++ +  + + K+CYIEG++DFIFG+  ++ E CHI+          S G+ITAQ R S  + +G+VFLR  ++G+     +YLGR +GPF RV+F  T +   +   GW++W     E S  + E  C G GS  ++R  W  +L      +QF + NFID D
Sbjct:  123 DTVWDNLGRHHFKNCYIEGAIDFIFGSGQSVYEDCHINATAGALASKVSFGYITAQGRSSDSDPSGFVFLRGSVSGSTS---VYLGRAYGPFSRVIFIQTDLSSVVHPEGWYSWHYGGYEMSFTYAEVECKGAGSDMSRRVPWIDKLHSFYTKQQFSISNFIDQD 284          
The following BLAST results are available for this feature:
BLAST of CN188154 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 83
Match NameE-valueIdentityDescription
PME31_ARATH5.763e-8679.31Pectinesterase 31 OS=Arabidopsis thaliana GN=PME31... [more]
PME53_ARATH1.029e-4253.85Probable pectinesterase 53 OS=Arabidopsis thaliana... [more]
PME11_ARATH1.032e-3444.52Putative pectinesterase 11 OS=Arabidopsis thaliana... [more]
PME68_ARATH1.542e-3039.41Probable pectinesterase 68 OS=Arabidopsis thaliana... [more]
PME67_ARATH5.858e-3039.53Probable pectinesterase 67 OS=Arabidopsis thaliana... [more]
PME15_ARATH9.992e-3040.49Probable pectinesterase 15 OS=Arabidopsis thaliana... [more]
PME14_ARATH1.704e-2940.51Putative pectinesterase 14 OS=Arabidopsis thaliana... [more]
PME8_ARATH1.595e-2737.35Probable pectinesterase 8 OS=Arabidopsis thaliana ... [more]
PME62_ARATH1.595e-2741.14Pectinesterase QRT1 OS=Arabidopsis thaliana GN=QRT... [more]
PME52_ARATH1.950e-2537.58Putative pectinesterase 52 OS=Arabidopsis thaliana... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0005J09_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0005J09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188154 ID=CN188154; Name=CN188154; organism=Citrus sinensis; type=EST; length=679bp
AGTGATTAATAGAATTGTTTTTTAATCACCCATAAAATTACTATAGTAAT
AAGCACACACCATCTTTCGTCATGACACAAGTACGATTTTATTGACCTCA
ATTTCGGTCTTATTTGCTGGGAACCTCATGCTTGTCTTATTCAATTGTGA
TCTTTAAGCAGAATATGGTATCCTCAGGGCCATTCTCTGGGCAAGCCAAG
GTCTTTGAGGATCTGGGTCGATGAAATTATGCATGAGAAACTGTTCTGCC
TCTTCATCTAACAGTTCTCTAGCCCAGGTTTCGCGTTTTGCTGGGCAGCT
ACCTGGTCCAAAACACCTATACTCATAAAAGCAAGCACTCCTCTCGTTCT
CCACTTTGCCCCAGTTATGCCAGCCTACATGTCTGATACATTGATCCATA
TATGTAAATGCAAAGACCACCCTTCCGAAAGGTCCCCATGGGCGTCCAAG
ATAGATATATCCTGTCCCTCCATTCCCAGTGATCACACATCTCAAAAACA
CATAACCAGTTGTCTCCTGAGAGGATTTCCTGCTTTGTGCAGTAATAAAA
CCTTGCGACTTGCAGTGGATATGACAATGCTCTATGAGAGCAGTACTATT
CCCAAATATAAAATCCACACTTCCTTCAATATAGCAATCTTTCAGATACT
GTTTTTCATAATGCAAGTAAAGAGTATCC
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