EY666007

Overview
NameEY666007
Unique NameEY666007
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length870
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11129 contig Csv1_Contig11129:590..1459. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY666007 vs. ExPASy Swiss-Prot
Match: LACT2_CAEEL (Beta-lactamase domain-containing protein 2 OS=Caenorhabditis elegans GN=lact-2 PE=2 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.855e-20
Identity = 72/262 (27.48%), Postives = 125/262 (47.71%), Query Frame = 2
Query:   26 VIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIANIWPEFKSNGKDLIKVHHVLNHTSGLHNVSVDLSSENPLLICDWDECLNRIALSAPETEPGQEQLYHYLSFGWLCGGIIERA--SGKKFQEILEEGIIQPLSIDGELYIGIPPGVESRLASLTIDTDDLNKVSGINNRPDLRLPSSF----QPDKISQLAAITPA---------VFNMLNIRRAIIPAANGHCSSRALARYYAALPDG 766
            VI+D   G   +   R   PD+   VFS TK + A  +  LVD G +  ++ ++ IWPEF  NGK+ I +  +++H +GL  + + ++ E+     D+++    IA   P  EPG +  YH +++GW+   I+ R+   G+      +E +     ID   +IG+PP  E  ++ L++ +  L+ V  I + P + +  +      P+ I++  A  P           FN   +      AA G   SR LAR ++ +  G
Sbjct:  102 VIVDLQGGYADKASGRKWTPDTRTVVFSTTKAVGAVCVAMLVDRGHISYDDKMSKIWPEFAQNGKENITIDWLMSHRAGLAALDMPITIED---ANDFEKMSEVIASQKPNWEPGTKSGYHAITYGWIVDQIVRRSDPKGRSVGRFFKEEVADVHGID--FHIGLPPSEEHTVSRLSMPS-TLHLVREIVHDPRVLIVLAVFNLRPPNSIARKIAANPTWFKLEQDVNTFNNPTLHAMEQVAALGITKSRDLARLFSLVQQG 357          
BLAST of EY666007 vs. ExPASy Swiss-Prot
Match: ESTB_BURGA (Esterase estB OS=Burkholderia gladioli GN=estB PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.164e-11
Identity = 53/173 (30.64%), Postives = 85/173 (49.13%), Query Frame = 2
Query:   14 KDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIANIWPEFK----SNGKDLIKVHHVLNHTSGLHNVSVD----------LSSENPLLICDWDECLNRIALSAPETEPGQEQLYHYLSFGWLCGGIIERASGKKFQEILEEGIIQPLSI 490
            + GE++   + G+  R   RP++ D+LF + SVTK I A  +  LV  G+L L+  +    PEF+       + L+ +HH+L HTSGL    ++          +S    L   D DE L R+A +     PG    Y  L+   L G ++ERA+G+     ++  + QPL +
Sbjct:   44 RHGEILYRRAQGLADREAGRPMREDTLFRLASVTKPIVALAVLRLVARGELALDAPVTRWLPEFRPRLADGSEPLVTIHHLLTHTSGLGYWLLEGAGSVYDRLGISDGIDLRDFDLDENLRRLASAPLSFAPGSGWQYS-LALDVL-GAVVERATGQPLAAAVDALVAQPLGM 214          
The following BLAST results are available for this feature:
BLAST of EY666007 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
LACT2_CAEEL2.855e-2027.48Beta-lactamase domain-containing protein 2 OS=Caen... [more]
ESTB_BURGA3.164e-1130.64Esterase estB OS=Burkholderia gladioli GN=estB PE=... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-102-011-F09-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY666007 ID=EY666007; Name=EY666007; organism=Citrus sinensis; type=EST; length=870bp
CCACGCGTCCGACAAAGATGGCGAGGTCATTATTGACACCTCTGCTGGCA
TGCTTGGCAGATATGATCCTCGTCCAGTTCAGCCAGATAGTCTTTTTCCT
GTTTTTTCCGTGACAAAGGGTATCACAGCAGGAATGTTACATTGGCTTGT
TGACAATGGAAAACTCAAGCTTGAGGAGAATATTGCAAACATTTGGCCTG
AGTTTAAATCTAATGGGAAAGATCTCATAAAGGTTCATCATGTGCTTAAT
CACACAAGTGGTTTGCATAATGTGTCGGTTGACCTTAGTTCAGAGAATCC
TTTGCTAATATGTGACTGGGATGAATGTTTGAATCGGATTGCCTTGTCGG
CACCTGAAACTGAACCTGGCCAAGAGCAGTTGTATCACTATCTGTCTTTT
GGTTGGCTGTGCGGTGGAATAATTGAGCGTGCATCTGGGAAGAAATTTCA
GGAGATTCTTGAAGAAGGAATAATTCAACCACTCTCTATTGATGGTGAGC
TTTATATCGGAATTCCACCAGGTGTGGAATCTCGACTTGCAAGCCTTACA
ATAGACACGGATGATCTCAACAAGGTCTCAGGGATTAACAATCGCCCTGA
CCTGCGCCTGCCCTCCTCATTCCAGCCTGACAAGATTTCCCAATTAGCTG
CCATCACACCAGCTGTATTTAACATGCTCAACATTCGCCGTGCCATCATA
CCTGCTGCTAATGGACATTGTTCAAGCCGTGCACTTGCTCGCTACTATGC
GGCGCTACCTGATGGTGGTGTAGTCCACCTCCCCATCTCGTTTGTCCAAC
CCACCACTTGGCAGCCACCCCACATCCCCAAATTTCCTTCCATGGAAACC
TCAAAAACCGGAAGGCACCA
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