CN188147

Overview
NameCN188147
Unique NameCN188147
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length643
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN188147 vs. ExPASy Swiss-Prot
Match: HEX6_RICCO (Hexose carrier protein HEX6 OS=Ricinus communis GN=HEX6 PE=2 SV=1)

HSP 1 Score: 301.597 bits (771), Expect = 2.271e-81
Identity = 147/189 (77.78%), Postives = 171/189 (90.48%), Query Frame = 1
Query:   76 MAAGLAITSEGGRYYNGKMTVFVVLSCIVAATGGLIFGYDIGISGGVTSMEPFLKKFFPEVYRKMKEDTKISNYCKFDSQLLAAFTSSLYISGLIASLFASTVTRAFGRKASILVGGTAFLAGSAIGGAALNIYMLIFGRVLLGVGIGFTNQSVPLYLSEMAPPKHRGAFTIGFQVCVAIGVLSANLLN 642
            MAAGLAITSEGG+Y NG+MT FV LSC++AA GG+IFGYDIG+SGGVTSM+PFLKKFFP+VYRKMKEDT+ISNYCKFDSQLL +FTSSLY++GL+AS FAS+VTRAFGRK SIL+GG  FLA +A+GGAA+N+YMLIFGRVLLGVG+GF NQ+VPLYLSEMAPP++RGA   GFQ  V IG LSANL+N
Sbjct:    1 MAAGLAITSEGGQY-NGRMTSFVALSCMMAAMGGVIFGYDIGVSGGVTSMDPFLKKFFPDVYRKMKEDTEISNYCKFDSQLLTSFTSSLYVAGLVASFFASSVTRAFGRKPSILLGGXVFLAXAALGGAAVNVYMLIFGRVLLGVGVGFANQAVPLYLSEMAPPRYRGAINNGFQFSVGIGALSANLIN 188          
BLAST of CN188147 vs. ExPASy Swiss-Prot
Match: STC_RICCO (Sugar carrier protein C OS=Ricinus communis GN=STC PE=2 SV=1)

HSP 1 Score: 239.58 bits (610), Expect = 1.060e-62
Identity = 121/191 (63.35%), Postives = 145/191 (75.92%), Query Frame = 1
Query:   76 MAAGLAITSEGG--RYYNGKMTVFVVLSCIVAATGGLIFGYDIGISGGVTSMEPFLKKFFPEVYRKMKEDTKISNYCKFDSQLLAAFTSSLYISGLIASLFASTVTRAFGRKASILVGGTAFLAGSAIGGAALNIYMLIFGRVLLGVGIGFTNQSVPLYLSEMAPPKHRGAFTIGFQVCVAIGVLSANLLN 642
            M A   I   GG  + Y G +T++V ++C+VAA GGLIFGYDIGISGGVTSM+ FLKKFFP VYRK K D   + YC++DSQ L  FTSSLY++ LIASL AST+TR FGRK S+L GG  F AG+ I GAA  ++MLI GR+LLG GIGF NQSVPLYLSEMAP K+RGA  IGFQ+ + IG+L AN+LN
Sbjct:    1 MPAVGGIPPSGGNRKVYPGNLTLYVTVTCVVAAMGGLIFGYDIGISGGVTSMDSFLKKFFPSVYRKKKADESSNQYCQYDSQTLTMFTSSLYLAALIASLVASTITRKFGRKLSMLFGGVLFCAGAIINGAAKAVWMLILGRILLGFGIGFANQSVPLYLSEMAPYKYRGALNIGFQLSITIGILVANVLN 191          
BLAST of CN188147 vs. ExPASy Swiss-Prot
Match: STP3_ARATH (Sugar transport protein 3 OS=Arabidopsis thaliana GN=STP3 PE=2 SV=2)

HSP 1 Score: 237.269 bits (604), Expect = 5.261e-62
Identity = 115/178 (64.61%), Postives = 148/178 (83.15%), Query Frame = 1
Query:  124 GKMTVFVVLSCIVAATGGLIFGYDIGISGGVTSMEPFLKKFFPEVYRKMKEDTKI-----SNYCKFDSQLLAAFTSSLYISGLIASLFASTVTRAFGRKASILVGGTAFLAGSAIGGAALNIYMLIFGRVLLGVGIGFTNQSVPLYLSEMAPPKHRGAFTIGFQVCVAIGVLSANLLN 642
            GK+T FVV SC++AA GG+IFGYDIG+SGGV SM PFLK+FFP+VY+  +ED +      ++YC F+SQLL +FTSSLY+SGLIA+L AS+VTR++GRK SI +GG +FLAG+A+GG+A N+ MLI  R+LLGVG+GF NQSVPLYLSEMAP K+RGA + GFQ+C+ IG LSAN++N
Sbjct:   18 GKITYFVVASCVMAAMGGVIFGYDIGVSGGVMSMGPFLKRFFPKVYKLQEEDRRRRGNSNNHYCLFNSQLLTSFTSSLYVSGLIATLLASSVTRSWGRKPSIFLGGVSFLAGAALGGSAQNVAMLIIARLLLGVGVGFANQSVPLYLSEMAPAKYRGAISNGFQLCIGIGFLSANVIN 195          
BLAST of CN188147 vs. ExPASy Swiss-Prot
Match: STP1_ARATH (Sugar transport protein 1 OS=Arabidopsis thaliana GN=STP1 PE=1 SV=2)

HSP 1 Score: 236.884 bits (603), Expect = 6.870e-62
Identity = 116/189 (61.38%), Postives = 144/189 (76.19%), Query Frame = 1
Query:   76 MAAGLAITSEGGRYYNGKMTVFVVLSCIVAATGGLIFGYDIGISGGVTSMEPFLKKFFPEVYRKMKEDTKISNYCKFDSQLLAAFTSSLYISGLIASLFASTVTRAFGRKASILVGGTAFLAGSAIGGAALNIYMLIFGRVLLGVGIGFTNQSVPLYLSEMAPPKHRGAFTIGFQVCVAIGVLSANLLN 642
            M AG  +  +G + Y GK+T FV+ +C+VAA GGLIFGYDIGISGGVTSM  FLK+FFP VYRK +ED   + YC++DS  L  FTSSLY++ LI+SL ASTVTR FGR+ S+L GG  F AG+ I G A +++MLI GR+LLG GIGF NQ+VPLYLSEMAP K+RGA  IGFQ+ + IG+L A +LN
Sbjct:    1 MPAGGFVVGDGQKAYPGKLTPFVLFTCVVAAMGGLIFGYDIGISGGVTSMPSFLKRFFPSVYRKQQEDASTNQYCQYDSPTLTMFTSSLYLAALISSLVASTVTRKFGRRLSMLFGGILFCAGALINGFAKHVWMLIVGRILLGFGIGFANQAVPLYLSEMAPYKYRGALNIGFQLSITIGILVAEVLN 189          
BLAST of CN188147 vs. ExPASy Swiss-Prot
Match: STP9_ARATH (Sugar transport protein 9 OS=Arabidopsis thaliana GN=STP9 PE=1 SV=1)

HSP 1 Score: 232.261 bits (591), Expect = 1.692e-60
Identity = 118/190 (62.11%), Postives = 142/190 (74.74%), Query Frame = 1
Query:   82 AGLAITSEGG---RYYNGKMTVFVVLSCIVAATGGLIFGYDIGISGGVTSMEPFLKKFFPEVYRKMKEDTKISNYCKFDSQLLAAFTSSLYISGLIASLFASTVTRAFGRKASILVGGTAFLAGSAIGGAALNIYMLIFGRVLLGVGIGFTNQSVPLYLSEMAPPKHRGAFTIGFQVCVAIGVLSANLLN 642
            AG A  SEGG     Y G +TVFV+++CIVAA GGL+FGYD+GISGGVTSME FL KFFPEV ++M E  + + YCKFD+QLL  FTSSLY++ L +S  AS VTR +GRK S+ VGG AFL GS     A N+ MLI GR+LLGVG+GF NQS P+YLSEMAP K RGA  IGFQ+ + IG+L ANL+N
Sbjct:    2 AGGAFVSEGGGGGNSYEGGVTVFVIMTCIVAAMGGLLFGYDLGISGGVTSMEEFLSKFFPEVDKQMHEARRETAYCKFDNQLLQLFTSSLYLAALASSFVASAVTRKYGRKISMFVGGVAFLIGSLFNAFATNVAMLIVGRLLLGVGVGFANQSTPVYLSEMAPAKIRGALNIGFQMAITIGILIANLIN 191          
BLAST of CN188147 vs. ExPASy Swiss-Prot
Match: STP4_ARATH (Sugar transport protein 4 OS=Arabidopsis thaliana GN=STP4 PE=1 SV=1)

HSP 1 Score: 229.95 bits (585), Expect = 8.399e-60
Identity = 113/189 (59.79%), Postives = 141/189 (74.60%), Query Frame = 1
Query:   76 MAAGLAITSEGGRYYNGKMTVFVVLSCIVAATGGLIFGYDIGISGGVTSMEPFLKKFFPEVYRKMKEDTKISNYCKFDSQLLAAFTSSLYISGLIASLFASTVTRAFGRKASILVGGTAFLAGSAIGGAALNIYMLIFGRVLLGVGIGFTNQSVPLYLSEMAPPKHRGAFTIGFQVCVAIGVLSANLLN 642
            MA G    + G R YN K+T  V ++C + A GGLIFGYD+GISGGVTSMEPFL++FFP VY+KMK   + + YC+FDSQLL  FTSSLY++ L++SLFAST+TR FGRK S+ +GG  F  GSA  G A NI ML+ GR+LLG G+GF NQSVP+YLSEMAPP  RGAF  GFQV +  G++ A ++N
Sbjct:    1 MAGGFVSQTPGVRNYNYKLTPKVFVTCFIGAFGGLIFGYDLGISGGVTSMEPFLEEFFPYVYKKMKSAHE-NEYCRFDSQLLTLFTSSLYVAALVSSLFASTITRVFGRKWSMFLGGFTFFIGSAFNGFAQNIAMLLIGRILLGFGVGFANQSVPVYLSEMAPPNLRGAFNNGFQVAIIFGIVVATIIN 188          
BLAST of CN188147 vs. ExPASy Swiss-Prot
Match: STP10_ARATH (Sugar transport protein 10 OS=Arabidopsis thaliana GN=STP10 PE=2 SV=1)

HSP 1 Score: 229.95 bits (585), Expect = 8.399e-60
Identity = 114/190 (60.00%), Postives = 142/190 (74.74%), Query Frame = 1
Query:   82 AGLAITSEGG---RYYNGKMTVFVVLSCIVAATGGLIFGYDIGISGGVTSMEPFLKKFFPEVYRKMKEDTKISNYCKFDSQLLAAFTSSLYISGLIASLFASTVTRAFGRKASILVGGTAFLAGSAIGGAALNIYMLIFGRVLLGVGIGFTNQSVPLYLSEMAPPKHRGAFTIGFQVCVAIGVLSANLLN 642
            AG A  SEGG   R Y G +T FV+++CIVAA GGL+FGYD+GISGGVTSME FL KFFP+V  +MK+    + YCKFD+Q+L  FTSSLY++ L+AS  AS +TR  GRK S+ +GG AFL G+     A+N+ MLI GR+LLGVG+GF NQS P+YLSEMAP K RGA  IGFQ+ + IG+L ANL+N
Sbjct:    2 AGGAFVSEGGGGGRSYEGGVTAFVIMTCIVAAMGGLLFGYDLGISGGVTSMEEFLTKFFPQVESQMKKAKHDTAYCKFDNQMLQLFTSSLYLAALVASFMASVITRKHGRKVSMFIGGLAFLIGALFNAFAVNVSMLIIGRLLLGVGVGFANQSTPVYLSEMAPAKIRGALNIGFQMAITIGILVANLIN 191          
BLAST of CN188147 vs. ExPASy Swiss-Prot
Match: STP11_ARATH (Sugar transport protein 11 OS=Arabidopsis thaliana GN=STP11 PE=1 SV=1)

HSP 1 Score: 229.565 bits (584), Expect = 1.097e-59
Identity = 113/191 (59.16%), Postives = 146/191 (76.44%), Query Frame = 1
Query:   76 MAAGLAITSEG-GRYYNGKMTVFVVLSCIVAATGGLIFGYDIGISGGVTSMEPFLKKFFPEVYRKMKEDT-KISNYCKFDSQLLAAFTSSLYISGLIASLFASTVTRAFGRKASILVGGTAFLAGSAIGGAALNIYMLIFGRVLLGVGIGFTNQSVPLYLSEMAPPKHRGAFTIGFQVCVAIGVLSANLLN 642
            MA G  I   G G  Y G++T FV+++CIVAA GGL+FGYDIGISGGV SME FL KFFP+V R+M+    + + YCK+D++LL  FTSSLY++ L AS  AST+TR FGRK S+++G  AFL+G+ + G A+N+ MLI GR+ LGVG+GF NQSVPLYLSEMAP K RGA  IGFQ+ + IG+L+AN++N
Sbjct:    1 MAGGAFIDESGHGGDYEGRVTAFVMITCIVAAMGGLLFGYDIGISGGVISMEDFLTKFFPDVLRQMQNKRGRETEYCKYDNELLTLFTSSLYLAALFASFLASTITRLFGRKVSMVIGSLAFLSGALLNGLAINLEMLIIGRLFLGVGVGFANQSVPLYLSEMAPAKIRGALNIGFQLAITIGILAANIVN 191          
BLAST of CN188147 vs. ExPASy Swiss-Prot
Match: STP12_ARATH (Sugar transport protein 12 OS=Arabidopsis thaliana GN=STP12 PE=2 SV=1)

HSP 1 Score: 229.18 bits (583), Expect = 1.433e-59
Identity = 112/183 (61.20%), Postives = 141/183 (77.05%), Query Frame = 1
Query:   94 ITSEGGRYYNGKMTVFVVLSCIVAATGGLIFGYDIGISGGVTSMEPFLKKFFPEVYRKMKEDTKISNYCKFDSQLLAAFTSSLYISGLIASLFASTVTRAFGRKASILVGGTAFLAGSAIGGAALNIYMLIFGRVLLGVGIGFTNQSVPLYLSEMAPPKHRGAFTIGFQVCVAIGVLSANLLN 642
            +  +G + Y GK+T++V ++CIVAA GGLIFGYDIGISGGVT+M+ F +KFFP VY K K+D   + YC+FDS  L  FTSSLY++ L +SL AS VTR FGRK S+L+GG  F AG+ + G A  ++MLI GR+LLG GIGFTNQSVPLYLSEMAP K+RGA  IGFQ+ + IG+L AN+LN
Sbjct:    7 VIGDGKKEYPGKLTLYVTVTCIVAAMGGLIFGYDIGISGGVTTMDSFQQKFFPSVYEKQKKDHDSNQYCRFDSVSLTLFTSSLYLAALCSSLVASYVTRQFGRKISMLLGGVLFCAGALLNGFATAVWMLIVGRLLLGFGIGFTNQSVPLYLSEMAPYKYRGALNIGFQLSITIGILVANVLN 189          
BLAST of CN188147 vs. ExPASy Swiss-Prot
Match: STP5_ARATH (Sugar transport protein 5 OS=Arabidopsis thaliana GN=STP5 PE=2 SV=1)

HSP 1 Score: 222.246 bits (565), Expect = 1.751e-57
Identity = 110/186 (59.14%), Postives = 144/186 (77.42%), Query Frame = 1
Query:   85 GLAITSEGGRYYNGKMTVFVVLSCIVAATGGLIFGYDIGISGGVTSMEPFLKKFFPEVYRKMKEDTKISNYCKFDSQLLAAFTSSLYISGLIASLFASTVTRAFGRKASILVGGTAFLAGSAIGGAALNIYMLIFGRVLLGVGIGFTNQSVPLYLSEMAPPKHRGAFTIGFQVCVAIGVLSANLLN 642
            GLA+        + K+T  VV+SCIVAA+ GLIFGYDIGISGGVT+M+PFL+KFFP V +K  E  K + YC +DSQLL AFTSSLY++GL+ASL AS +T A+GR+ ++++GG  FL G+ I G A NI MLI GR+LLG G+GFTNQ+ P+YLSE+APP+ RGAF IGF   +++GV++ANL+N
Sbjct:    5 GLALDVSSAGNIDAKITAAVVMSCIVAASCGLIFGYDIGISGGVTTMKPFLEKFFPSVLKKASE-AKTNVYCVYDSQLLTAFTSSLYVAGLVASLVASRLTAAYGRRTTMILGGFTFLFGALINGLAANIAMLISGRILLGFGVGFTNQAAPVYLSEVAPPRWRGAFNIGFSCFISMGVVAANLIN 189          
The following BLAST results are available for this feature:
BLAST of CN188147 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 86
Match NameE-valueIdentityDescription
HEX6_RICCO2.271e-8177.78Hexose carrier protein HEX6 OS=Ricinus communis GN... [more]
STC_RICCO1.060e-6263.35Sugar carrier protein C OS=Ricinus communis GN=STC... [more]
STP3_ARATH5.261e-6264.61Sugar transport protein 3 OS=Arabidopsis thaliana ... [more]
STP1_ARATH6.870e-6261.38Sugar transport protein 1 OS=Arabidopsis thaliana ... [more]
STP9_ARATH1.692e-6062.11Sugar transport protein 9 OS=Arabidopsis thaliana ... [more]
STP4_ARATH8.399e-6059.79Sugar transport protein 4 OS=Arabidopsis thaliana ... [more]
STP10_ARATH8.399e-6060.00Sugar transport protein 10 OS=Arabidopsis thaliana... [more]
STP11_ARATH1.097e-5959.16Sugar transport protein 11 OS=Arabidopsis thaliana... [more]
STP12_ARATH1.433e-5961.20Sugar transport protein 12 OS=Arabidopsis thaliana... [more]
STP5_ARATH1.751e-5759.14Sugar transport protein 5 OS=Arabidopsis thaliana ... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS05_0005J05_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0005J05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188147 ID=CN188147; Name=CN188147; organism=Citrus sinensis; type=EST; length=643bp
ATTTTAACTTTTCTCACTCTCCTTTCTCTCTTGCTGTGACTGCTGATTAG
TTTTGAAGATAAAGCAGCAGCCAATATGGCAGCAGGCTTAGCAATAACTA
GTGAAGGCGGGCGGTATTACAACGGGAAGATGACTGTATTTGTTGTCTTG
TCTTGTATTGTTGCTGCCACCGGTGGGCTTATATTCGGCTATGATATTGG
AATTTCAGGTGGAGTGACATCAATGGAGCCATTTTTGAAGAAGTTTTTCC
CGGAAGTGTACAGAAAGATGAAAGAAGACACCAAGATAAGCAATTATTGC
AAGTTTGACAGCCAATTATTAGCCGCGTTCACGTCCTCTCTGTACATTTC
TGGCCTCATAGCTTCCTTATTTGCCTCCACAGTCACCAGAGCCTTCGGCC
GCAAGGCATCAATCCTGGTCGGCGGCACGGCATTTCTTGCTGGTTCAGCC
ATAGGGGGCGCTGCATTAAACATTTACATGCTGATATTTGGGCGTGTGTT
GCTAGGTGTTGGGATTGGTTTTACAAACCAATCAGTGCCGCTATATCTCT
CAGAAATGGCACCACCAAAACACAGAGGAGCATTCACCATTGGCTTCCAA
GTATGTGTTGCCATTGGTGTCCTATCCGCTAATCTTCTCAATT
back to top