CN188146
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN188146 vs. ExPASy Swiss-Prot
Match: HSP97_STRFN (97 kDa heat shock protein OS=Strongylocentrotus franciscanus GN=HSP110 PE=2 SV=1) HSP 1 Score: 233.802 bits (595), Expect = 6.044e-61 Identity = 119/221 (53.85%), Postives = 155/221 (70.14%), Query Frame = 1 Query: 1 SRQFSDPELQRDLKSLPFAVTEGPDGYPLIHARYLGETRVFTPTQVLGMLLSNLKAIAESNLNAAVVDCCIGIPVYFTDLQRRAVIDAATIAGLHPLRLFHETTATALAYGIYKTDL--PENDQLNVAFVDIGHASLQVCIAGFKKGQLKILGHSFDRSVGGRDFDEVLFQHFAAKFKEEYKIDVSQNARASLRLRVACEKLKKVLSANPEA-PLNIECLM 654 +RQFSDP +Q+D +P+ VT+ P+G + +YLGET FTP Q+ M+L+ LKA AE NL VVDC I +P Y+TDL+RR VI AA IAGL+ LR+ +TTA ALAYGIYK DL PE NV FVD GH+SLQV + F KG+LK+L ++ D+++GGRDFD +L +HFA F+ YK+DV N RA LRL C+K KK++SAN +NIEC+M Sbjct: 72 ARQFSDPSVQKDAHVVPYKVTQLPNGNVGMQVQYLGETETFTPEQIYAMILTKLKATAEVNLCRKVVDCVISVPQYYTDLERRGVIHAAEIAGLNCLRVISDTTAVALAYGIYKQDLPTPEEKPRNVVFVDCGHSSLQVSVCAFNKGKLKVLANASDKNLGGRDFDWLLAEHFAVDFQTRYKMDVKSNQRAWLRLMAECDKTKKLMSANATVISMNIECIM 292
BLAST of CN188146 vs. ExPASy Swiss-Prot
Match: HSP97_STRPU (97 kDa heat shock protein OS=Strongylocentrotus purpuratus PE=1 SV=2) HSP 1 Score: 232.646 bits (592), Expect = 1.347e-60 Identity = 117/221 (52.94%), Postives = 156/221 (70.59%), Query Frame = 1 Query: 1 SRQFSDPELQRDLKSLPFAVTEGPDGYPLIHARYLGETRVFTPTQVLGMLLSNLKAIAESNLNAAVVDCCIGIPVYFTDLQRRAVIDAATIAGLHPLRLFHETTATALAYGIYKTDL--PENDQLNVAFVDIGHASLQVCIAGFKKGQLKILGHSFDRSVGGRDFDEVLFQHFAAKFKEEYKIDVSQNARASLRLRVACEKLKKVLSANPE-APLNIECLM 654 +R+FSDP +Q+D K +P+ +T+ P+G + +YLGET FTP Q+ M+L+ LK+ AE NL VVDC I +P Y+TDL+RR VI AA IAGL+ LR+ +TTA ALAYGIYK DL PE NV FVD GH+SLQV + F KG+LK+L ++ D+++GGRDFD +L +HFA F+ YK+DV N RA LRL C+K KK++SAN +NIEC+M Sbjct: 72 ARRFSDPSVQKDAKVVPYKITQLPNGNVGMQVQYLGETETFTPEQIYAMILTKLKSTAEINLCRKVVDCVISVPQYYTDLERRGVIHAAEIAGLNCLRVISDTTAVALAYGIYKQDLPTPEEKPRNVVFVDCGHSSLQVSVCAFNKGKLKVLANASDKNLGGRDFDWLLAEHFAVDFQTRYKMDVKSNQRAWLRLMAECDKTKKLMSANATLISMNIECIM 292
BLAST of CN188146 vs. ExPASy Swiss-Prot
Match: HSP74_CANFA (Heat shock 70 kDa protein 4 OS=Canis familiaris GN=HSPA4 PE=1 SV=1) HSP 1 Score: 216.468 bits (550), Expect = 9.986e-56 Identity = 112/220 (50.91%), Postives = 148/220 (67.27%), Query Frame = 1 Query: 4 RQFSDPELQRDLKSLPFAVTEGPDGYPLIHARYLGETRVFTPTQVLGMLLSNLKAIAESNLNAAVVDCCIGIPVYFTDLQRRAVIDAATIAGLHPLRLFHETTATALAYGIYKTDLP--ENDQLNVAFVDIGHASLQVCIAGFKKGQLKILGHSFDRSVGGRDFDEVLFQHFAAKFKEEYKIDVSQNARASLRLRVACEKLKKVLSAN-PEAPLNIECLM 654 R FSDP ++ + +L + + + P G I +Y+ E R FT QV MLLS LK AES L VVDC + +P ++TD +RR+V+DA IAGL+ LRL +ETTA ALAYGIYK DLP E NV FVD+GH+S QV + F +G+LK+L +FD ++GGR FDEVL HF +F ++YK+D+ RA LRL CEKLKK++SAN + PL+IEC M Sbjct: 73 RAFSDPFVEAEKSNLAYDIVQLPTGLTGIKVKYMEEERNFTTEQVTAMLLSKLKETAESVLKKPVVDCVVSVPCFYTDAERRSVMDATQIAGLNCLRLMNETTAVALAYGIYKQDLPALEEKPRNVVFVDMGHSSYQVSVCAFNRGKLKVLATAFDTTLGGRKFDEVLVNHFCEEFGKKYKLDIKSKIRALLRLSQECEKLKKLMSANASDLPLSIECFM 292
BLAST of CN188146 vs. ExPASy Swiss-Prot
Match: HS74L_MOUSE (Heat shock 70 kDa protein 4L OS=Mus musculus GN=Hspa4l PE=1 SV=2) HSP 1 Score: 215.698 bits (548), Expect = 1.703e-55 Identity = 113/220 (51.36%), Postives = 150/220 (68.18%), Query Frame = 1 Query: 4 RQFSDPELQRDLKSLPFAVTEGPDGYPLIHARYLGETRVFTPTQVLGMLLSNLKAIAESNLNAAVVDCCIGIPVYFTDLQRRAVIDAATIAGLHPLRLFHETTATALAYGIYKTDLPENDQ--LNVAFVDIGHASLQVCIAGFKKGQLKILGHSFDRSVGGRDFDEVLFQHFAAKFKEEYKIDVSQNARASLRLRVACEKLKKVLSAN-PEAPLNIECLM 654 R F DP +Q + LP+ + + P+G + RYL E R F QV GMLL+ LK +E+ L V DC I IP +FTD +RR+V+ AA +AGL+ LRL +ETTA ALAYGIYK DLP D+ NV F+D+GH++ QV + F KG+LK+L +FD +GGR+FDE L +F +FK +YKI+V +N+RA LRL CEKLKK++SAN + PLNIEC M Sbjct: 73 RSFDDPIVQTERIRLPYELQKMPNGSTGVKVRYLEEERPFAIEQVTGMLLAKLKETSENALKKPVADCVISIPSFFTDAERRSVMAAAQVAGLNCLRLMNETTAVALAYGIYKQDLPSLDEKPRNVVFIDMGHSAYQVSVCAFNKGKLKVLATTFDPYLGGRNFDEALVDYFCDEFKTKYKINVKENSRALLRLYQECEKLKKLMSANASDLPLNIECFM 292
BLAST of CN188146 vs. ExPASy Swiss-Prot
Match: HS74L_HUMAN (Heat shock 70 kDa protein 4L OS=Homo sapiens GN=HSPA4L PE=1 SV=2) HSP 1 Score: 215.312 bits (547), Expect = 2.225e-55 Identity = 113/220 (51.36%), Postives = 150/220 (68.18%), Query Frame = 1 Query: 4 RQFSDPELQRDLKSLPFAVTEGPDGYPLIHARYLGETRVFTPTQVLGMLLSNLKAIAESNLNAAVVDCCIGIPVYFTDLQRRAVIDAATIAGLHPLRLFHETTATALAYGIYKTDLPENDQ--LNVAFVDIGHASLQVCIAGFKKGQLKILGHSFDRSVGGRDFDEVLFQHFAAKFKEEYKIDVSQNARASLRLRVACEKLKKVLSAN-PEAPLNIECLM 654 R F DP +Q + LP+ + + P+G + RYL E R F QV GMLL+ LK +E+ L V DC I IP +FTD +RR+V+ AA +AGL+ LRL +ETTA ALAYGIYK DLP D+ NV F+D+GH++ QV + F KG+LK+L +FD +GGR+FDE L +F +FK +YKI+V +N+RA LRL CEKLKK++SAN + PLNIEC M Sbjct: 73 RSFDDPIVQTERIRLPYELQKMPNGSAGVKVRYLEEERPFAIEQVTGMLLAKLKETSENALKKPVADCVISIPSFFTDAERRSVMAAAQVAGLNCLRLMNETTAVALAYGIYKQDLPPLDEKPRNVVFIDMGHSAYQVSVCAFNKGKLKVLATTFDPYLGGRNFDEALVDYFCDEFKTKYKINVKENSRALLRLYQECEKLKKLMSANASDLPLNIECFM 292
BLAST of CN188146 vs. ExPASy Swiss-Prot
Match: HSP74_MOUSE (Heat shock 70 kDa protein 4 OS=Mus musculus GN=Hspa4 PE=1 SV=1) HSP 1 Score: 214.927 bits (546), Expect = 2.906e-55 Identity = 112/220 (50.91%), Postives = 147/220 (66.82%), Query Frame = 1 Query: 4 RQFSDPELQRDLKSLPFAVTEGPDGYPLIHARYLGETRVFTPTQVLGMLLSNLKAIAESNLNAAVVDCCIGIPVYFTDLQRRAVIDAATIAGLHPLRLFHETTATALAYGIYKTDLP--ENDQLNVAFVDIGHASLQVCIAGFKKGQLKILGHSFDRSVGGRDFDEVLFQHFAAKFKEEYKIDVSQNARASLRLRVACEKLKKVLSAN-PEAPLNIECLM 654 R FSDP ++ + +L + + + P G I Y+ E R FT QV MLLS LK AES L VVDC + +P ++TD +RR+V+DA IAGL+ LRL +ETTA ALAYGIYK DLP E NV FVD+GH++ QV + F KG+LK+L +FD ++GGR FDEVL HF +F ++YK+D+ RA LRL CEKLKK++SAN + PL+IEC M Sbjct: 73 RAFSDPFVEAEKSNLAYDIVQLPTGLTGIKVTYMEEERNFTTEQVTAMLLSKLKETAESVLKKPVVDCVVSVPSFYTDAERRSVMDATQIAGLNCLRLMNETTAVALAYGIYKQDLPALEEKPRNVVFVDMGHSAYQVSVCAFNKGKLKVLATAFDTTLGGRKFDEVLVNHFCEEFGKKYKLDIKSKIRALLRLSQECEKLKKLMSANASDLPLSIECFM 292
BLAST of CN188146 vs. ExPASy Swiss-Prot
Match: HSP74_PONAB (Heat shock 70 kDa protein 4 OS=Pongo abelii GN=HSPA4 PE=2 SV=1) HSP 1 Score: 214.542 bits (545), Expect = 3.795e-55 Identity = 112/220 (50.91%), Postives = 147/220 (66.82%), Query Frame = 1 Query: 4 RQFSDPELQRDLKSLPFAVTEGPDGYPLIHARYLGETRVFTPTQVLGMLLSNLKAIAESNLNAAVVDCCIGIPVYFTDLQRRAVIDAATIAGLHPLRLFHETTATALAYGIYKTDLP--ENDQLNVAFVDIGHASLQVCIAGFKKGQLKILGHSFDRSVGGRDFDEVLFQHFAAKFKEEYKIDVSQNARASLRLRVACEKLKKVLSAN-PEAPLNIECLM 654 R FSDP ++ + +L + V + P G I Y+ E R FT QV MLLS LK AES L VVDC + +P ++TD +RR+V+DA IAGL+ LRL +ETTA ALAYGIYK DLP E NV FVD+GH++ QV + F +G+LK+L +FD ++GGR FDEVL HF +F ++YK+D+ RA LRL CEKLKK++SAN + PL+IEC M Sbjct: 73 RAFSDPFVEAEKSNLAYDVVQLPTGLTGIKVTYMEEERNFTTEQVTAMLLSKLKETAESVLKKPVVDCVVSVPCFYTDAERRSVMDATQIAGLNCLRLMNETTAVALAYGIYKQDLPALEEKPRNVVFVDMGHSAYQVSVCAFNRGKLKVLATAFDTTLGGRKFDEVLVNHFCEEFGKKYKLDIKSKIRALLRLSQECEKLKKLMSANASDLPLSIECFM 292
BLAST of CN188146 vs. ExPASy Swiss-Prot
Match: HSP74_RAT (Heat shock 70 kDa protein 4 OS=Rattus norvegicus GN=Hspa4 PE=1 SV=1) HSP 1 Score: 214.157 bits (544), Expect = 4.956e-55 Identity = 111/220 (50.45%), Postives = 147/220 (66.82%), Query Frame = 1 Query: 4 RQFSDPELQRDLKSLPFAVTEGPDGYPLIHARYLGETRVFTPTQVLGMLLSNLKAIAESNLNAAVVDCCIGIPVYFTDLQRRAVIDAATIAGLHPLRLFHETTATALAYGIYKTDLP--ENDQLNVAFVDIGHASLQVCIAGFKKGQLKILGHSFDRSVGGRDFDEVLFQHFAAKFKEEYKIDVSQNARASLRLRVACEKLKKVLSAN-PEAPLNIECLM 654 R FSDP ++ + +L + + + P G I Y+ E R FT QV MLLS LK AES L VVDC + +P ++TD +RR+V+DA IAGL+ LRL +ETTA ALAYGIYK DLP E NV FVD+GH++ QV + F +G+LK+L +FD ++GGR FDEVL HF +F ++YK+D+ RA LRL CEKLKK++SAN + PL+IEC M Sbjct: 73 RAFSDPFVEAEKSNLAYDIVQLPTGLTGIKVTYMEEERNFTTEQVTAMLLSKLKETAESVLKKPVVDCVVSVPSFYTDAERRSVMDATQIAGLNCLRLMNETTAVALAYGIYKQDLPALEEKPRNVVFVDMGHSAYQVSVCAFNRGKLKVLATAFDTTLGGRKFDEVLVNHFCEEFGKKYKLDIKSKVRALLRLSQECEKLKKLMSANASDLPLSIECFM 292
BLAST of CN188146 vs. ExPASy Swiss-Prot
Match: HSP74_HUMAN (Heat shock 70 kDa protein 4 OS=Homo sapiens GN=HSPA4 PE=1 SV=4) HSP 1 Score: 214.157 bits (544), Expect = 4.956e-55 Identity = 111/220 (50.45%), Postives = 147/220 (66.82%), Query Frame = 1 Query: 4 RQFSDPELQRDLKSLPFAVTEGPDGYPLIHARYLGETRVFTPTQVLGMLLSNLKAIAESNLNAAVVDCCIGIPVYFTDLQRRAVIDAATIAGLHPLRLFHETTATALAYGIYKTDLP--ENDQLNVAFVDIGHASLQVCIAGFKKGQLKILGHSFDRSVGGRDFDEVLFQHFAAKFKEEYKIDVSQNARASLRLRVACEKLKKVLSAN-PEAPLNIECLM 654 R FSDP ++ + +L + + + P G I Y+ E R FT QV MLLS LK AES L VVDC + +P ++TD +RR+V+DA IAGL+ LRL +ETTA ALAYGIYK DLP E NV FVD+GH++ QV + F +G+LK+L +FD ++GGR FDEVL HF +F ++YK+D+ RA LRL CEKLKK++SAN + PL+IEC M Sbjct: 73 RAFSDPFVEAEKSNLAYDIVQLPTGLTGIKVTYMEEERNFTTEQVTAMLLSKLKETAESVLKKPVVDCVVSVPCFYTDAERRSVMDATQIAGLNCLRLMNETTAVALAYGIYKQDLPALEEKPRNVVFVDMGHSAYQVSVCAFNRGKLKVLATAFDTTLGGRKFDEVLVNHFCEEFGKKYKLDIKSKIRALLRLSQECEKLKKLMSANASDLPLSIECFM 292
BLAST of CN188146 vs. ExPASy Swiss-Prot
Match: HS105_RAT (Heat shock protein 105 kDa OS=Rattus norvegicus GN=Hsph1 PE=1 SV=1) HSP 1 Score: 206.068 bits (523), Expect = 1.350e-52 Identity = 106/220 (48.18%), Postives = 146/220 (66.36%), Query Frame = 1 Query: 4 RQFSDPELQRDLKSLPFAVTEGPDGYPLIHARYLGETRVFTPTQVLGMLLSNLKAIAESNLNAAVVDCCIGIPVYFTDLQRRAVIDAATIAGLHPLRLFHETTATALAYGIYKTDLPENDQLN--VAFVDIGHASLQVCIAGFKKGQLKILGHSFDRSVGGRDFDEVLFQHFAAKFKEEYKIDVSQNARASLRLRVACEKLKKVLSAN-PEAPLNIECLM 654 R F+DP +Q++ ++L + + +G I Y+ E +F+ Q+ MLL+ LK AE+NL V DC I +P +FTD +RR+V+DAA I GL+ LRL ++ TA AL YGIYK DLP D+ V FVD+GH+S QV F KG+LK+LG +FD +GG++FDE L +HF A+FK +YK+D RA LRL CEKLKK++S+N + PLNIEC M Sbjct: 73 RAFNDPFIQKEKENLSYDLVPMKNGGVGIKVMYMDEDHLFSVEQITAMLLTKLKETAENNLKKPVTDCVISVPSFFTDAERRSVLDAAQIVGLNCLRLMNDMTAVALNYGIYKQDLPNADEKPRVVVFVDMGHSSFQVSACAFNKGKLKVLGTAFDPFLGGKNFDEKLVEHFCAEFKTKYKLDAKSKIRALLRLHQECEKLKKLMSSNSTDLPLNIECFM 292 The following BLAST results are available for this feature:
BLAST of CN188146 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188146 ID=CN188146; Name=CN188146; organism=Citrus sinensis; type=EST; length=654bpback to top |